Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H05
         (609 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...    93   2e-19
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...    93   2e-19

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 43/53 (81%), Positives = 48/53 (90%)
 Frame = +3

Query: 261 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDE 419
           MK N  V+SSRRKNRKRHF APSHIRR LMSAPLSKELRQK+NV+SMPIR+D+
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDD 53



 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +1

Query: 511 RKFVVYIERIQREKANGASVYVGIQPSKCVIVK 609
           +KFVVY+E+IQRE ANG +VYVGI PSK +IVK
Sbjct: 76  KKFVVYVEKIQRENANGTNVYVGIHPSKVLIVK 108


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 43/53 (81%), Positives = 48/53 (90%)
 Frame = +3

Query: 261 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDE 419
           MK N  V+SSRRKNRKRHF APSHIRR LMSAPLSKELRQK+NV+SMPIR+D+
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDD 53



 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +1

Query: 511 RKFVVYIERIQREKANGASVYVGIQPSKCVIVK 609
           +KFVVY+E+IQRE ANG +VYVGI PSK +IVK
Sbjct: 76  KKFVVYVEKIQRENANGTNVYVGIHPSKVLIVK 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,626,506
Number of Sequences: 53049
Number of extensions: 505184
Number of successful extensions: 1119
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)