Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H04
(517 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 234 4e-62
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 128 3e-30
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 127 6e-30
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 122 2e-28
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 116 9e-27
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 112 2e-25
10_08_0620 - 19321612-19323237 111 2e-25
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 107 4e-24
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 106 9e-24
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 92 2e-19
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 90 1e-18
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 61 4e-10
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 60 1e-09
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 56 2e-08
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 55 4e-08
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 48 4e-06
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 46 2e-05
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 43 1e-04
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 39 0.002
07_01_0595 - 4432642-4432926,4433062-4433769,4433964-4434164,443... 30 1.3
01_06_0629 + 30712268-30713023 29 1.7
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 28 3.9
01_05_0642 - 23883300-23884298 28 3.9
02_04_0488 + 23397480-23397687,23397777-23397805,23398462-233985... 27 6.8
02_04_0485 + 23338980-23339187,23339277-23339305,23339962-233400... 27 6.8
12_01_0670 + 5698852-5699061,5700894-5701316 27 8.9
08_02_0073 + 11919938-11920060,11922325-11922939 27 8.9
07_03_1368 + 26079623-26079845,26079939-26080033,26080131-26080370 27 8.9
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 234 bits (572), Expect = 4e-62
Identities = 109/163 (66%), Positives = 135/163 (82%)
Frame = +2
Query: 29 MQPQILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 208
MQPQI+LL+EGTD +QG+ Q++SNINAC +V D VRTTLGPRGMDKLI D G ISND
Sbjct: 5 MQPQIILLKEGTDTSQGRAQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISND 64
Query: 209 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVI 388
GATIM+LLDI+HPAAK LVDIAKSQD+EVGDGTT+VV+LA E LK +P++E GVHP +
Sbjct: 65 GATIMRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSL 124
Query: 389 VRAVRTAAKLAVDKVKELAVTIDKKSPEEQRELLGKCAETAMS 517
+R+ RTA LA++KVK+LA +I+ KS EE++ELL KCA T +S
Sbjct: 125 IRSYRTAGHLAIEKVKDLATSIEGKSLEEKKELLAKCAATTLS 167
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 128 bits (308), Expect = 3e-30
Identities = 59/139 (42%), Positives = 95/139 (68%)
Frame = +2
Query: 41 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATI 220
+L+L++ + G +NI A + V D +RTTLGPR M K+++D SG V++NDG I
Sbjct: 7 VLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAI 66
Query: 221 MKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAV 400
++ +DI HPAAK++++++++QD EVGDGTTSV++LAGE+L F++ HP VI RA
Sbjct: 67 LREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAY 126
Query: 401 RTAAKLAVDKVKELAVTID 457
A + A+ + ++A+ +D
Sbjct: 127 TKALEDALAVLDKIAMHVD 145
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 127 bits (306), Expect = 6e-30
Identities = 57/139 (41%), Positives = 95/139 (68%)
Frame = +2
Query: 41 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATI 220
+L+L++ + G +NI A + V D +RTTLGP+ M K+++D +G V++NDG I
Sbjct: 7 VLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCI 66
Query: 221 MKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAV 400
++ LD+ HPAAK++++++++QD EVGDGTTSV++LAGE+L + F++ HP VI RA
Sbjct: 67 LRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAY 126
Query: 401 RTAAKLAVDKVKELAVTID 457
A A+ + ++A+ +D
Sbjct: 127 TKALDDALSVLDKIAIPVD 145
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 122 bits (293), Expect = 2e-28
Identities = 61/140 (43%), Positives = 90/140 (64%)
Frame = +2
Query: 98 NINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAK 277
NI A + V DAVRT+LGPRGMDK+I + +I+NDGATI+ + ++ PAA+ L ++++
Sbjct: 31 NIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARMLAELSR 90
Query: 278 SQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKELAVTID 457
SQDA GDGTT+VV+LAG LL+R + + G HP A+ A AV+ + +A+ I+
Sbjct: 91 SQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAMAIPIE 150
Query: 458 KKSPEEQRELLGKCAETAMS 517
R+ L K A TA++
Sbjct: 151 L----SDRDSLVKSASTALN 166
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 116 bits (280), Expect = 9e-27
Identities = 65/159 (40%), Positives = 100/159 (62%), Gaps = 2/159 (1%)
Frame = +2
Query: 47 LLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHS-GKAV-ISNDGATI 220
+L++ + +G+ ++ + D V+TTLGP+GMDK++ G++V ++NDGATI
Sbjct: 4 VLKDDAVEEKGERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 63
Query: 221 MKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAV 400
+K L I +PAAK LVDI+K QD EVGDGTTSVV+LAGELL+ V + +HP I+
Sbjct: 64 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGY 123
Query: 401 RTAAKLAVDKVKELAVTIDKKSPEEQRELLGKCAETAMS 517
R A + A + + E + +K++ ++ R L A T +S
Sbjct: 124 RMAVECARNALLERTMD-NKENIDKFRSDLMNIAMTTLS 161
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 112 bits (269), Expect = 2e-25
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 2/158 (1%)
Frame = +2
Query: 47 LLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHS-GKAV-ISNDGATI 220
LL++ + +G+ +++ + D V+TTLGP+GMDK++ G++V ++NDGATI
Sbjct: 5 LLKDDATEEKGERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 64
Query: 221 MKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAV 400
+K L I +PAAK LVDI+K QD EVGDGTTSVV+LAGELL+ V + +HP I+
Sbjct: 65 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTII--- 121
Query: 401 RTAAKLAVDKVKELAVTIDKKSPEEQRELLGKCAETAM 514
A K D + T+ K + +E A A+
Sbjct: 122 --ADKFRSDLMNIAMTTLSSKILSQDKEYFAGLAVDAV 157
>10_08_0620 - 19321612-19323237
Length = 541
Score = 111 bits (268), Expect = 2e-25
Identities = 60/144 (41%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Frame = +2
Query: 98 NINACQLVVDAVRTTLGPRGMDKLIVDHSG----KAVISNDGATIMKLLDIVHPAAKTLV 265
NI A + V A RT+LGPRGMDK+I S +I+NDGATI+ + ++ PAA+ L
Sbjct: 31 NIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARMLA 90
Query: 266 DIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKELA 445
D+++SQDA GDGTT+VV+LAG LL+R + + G HP A+ A AV+ + +A
Sbjct: 91 DLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGMA 150
Query: 446 VTIDKKSPEEQRELLGKCAETAMS 517
+ ++ R+ L K A TA++
Sbjct: 151 IPVEL----SDRDALVKSASTALN 170
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 107 bits (258), Expect = 4e-24
Identities = 52/135 (38%), Positives = 86/135 (63%)
Frame = +2
Query: 41 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATI 220
IL +E + +G +NI A + V +RT+LGP+GMDK++ G I+NDGATI
Sbjct: 14 ILREQEKKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATI 73
Query: 221 MKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAV 400
++ +D+ + AK +V+++ SQD E+GDGTT VV++AG LL++ +E G+HP I
Sbjct: 74 LEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGY 133
Query: 401 RTAAKLAVDKVKELA 445
A+++A D ++ ++
Sbjct: 134 ELASRIAFDHLEHIS 148
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 106 bits (255), Expect = 9e-24
Identities = 51/148 (34%), Positives = 90/148 (60%), Gaps = 5/148 (3%)
Frame = +2
Query: 47 LLREGTDQTQGKPQ-LISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIM 223
+L+EG G + ++ NI+AC+ + RT+LGP GM+K++++H K ++ND ATI+
Sbjct: 9 MLKEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 68
Query: 224 KLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIV---- 391
L++ HPAAK LV ++Q E+GDG + AGELL++ + +G+HP I+
Sbjct: 69 NELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGYT 128
Query: 392 RAVRTAAKLAVDKVKELAVTIDKKSPEE 475
+A+ ++ D V++ + +D ++ EE
Sbjct: 129 KAINKTVEILEDLVEKGSENMDVRNKEE 156
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 92.3 bits (219), Expect = 2e-19
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = +2
Query: 167 LIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKR 346
++VD G I+NDGATI+++L++ HPAAK LV++A+ QD EVGDGTTSVVI+A ELLKR
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKR 60
Query: 347 LRPFVEVGVHPRVIVRAVR 403
V +HP I+ R
Sbjct: 61 GNDLVRNKIHPTSIISGYR 79
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 89.8 bits (213), Expect = 1e-18
Identities = 46/139 (33%), Positives = 78/139 (56%)
Frame = +2
Query: 98 NINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAK 277
NINA + + D ++T LGP+G K++V +G ++ DG T++K + I +P A + A
Sbjct: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
Query: 278 SQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKELAVTID 457
+QD GDGTTS V+ GEL+K+ ++ G HPR +V A + ++ +++ ++
Sbjct: 82 AQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSV- 140
Query: 458 KKSPEEQRELLGKCAETAM 514
E RE+L A T +
Sbjct: 141 VMGDEPDREILKMIARTTL 159
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 61.3 bits (142), Expect = 4e-10
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Frame = +2
Query: 119 VVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHPA----AKTLVDIAKSQD 286
+ D V TLGP+G + ++ G I NDG T+ + +++ P AK + A +
Sbjct: 79 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 138
Query: 287 AEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKELAVTID 457
GDGTT+ V+LA L+ V G +P I R + AK V+++K+L+ ++
Sbjct: 139 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELKKLSKEVE 195
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 60.1 bits (139), Expect = 1e-09
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Frame = +2
Query: 104 NACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP----AAKTLVDI 271
N + D V TLGP+G + ++ G I NDG T+ K +++ P AK +
Sbjct: 70 NGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 129
Query: 272 AKSQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKELAVT 451
A + GDGTT+ V+LA ++ V G +P I R + AK V ++++++
Sbjct: 130 AAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQKMSKE 189
Query: 452 ID 457
++
Sbjct: 190 VE 191
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Frame = +2
Query: 128 AVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP----AAKTLVDIAKSQDAEV 295
AV TLGPRG + +++D G + NDG TI + +++ P A + ++A +
Sbjct: 67 AVAVTLGPRGRN-VVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSA 125
Query: 296 GDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKE 439
GDGTT+ +LA E++K V G +P I + + V+++++
Sbjct: 126 GDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHSLVEELEK 173
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 54.8 bits (126), Expect = 4e-08
Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Frame = +2
Query: 119 VVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP----AAKTLVDIAKSQD 286
+ +AV TLGPRG + +++D G + NDG TI + +++ P A + ++A +
Sbjct: 59 LANAVGVTLGPRGRN-VVLDEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTN 117
Query: 287 AEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKELA 445
GDGTT+ +LA E++K V G +P + + + ++++++ A
Sbjct: 118 DSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVHGLIEELEKKA 170
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 48.0 bits (109), Expect = 4e-06
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +2
Query: 119 VVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLD----IVHPAAKTLVDIAKSQD 286
+ DAV+ T+GP+G +I G ++ DG T+ K ++ + + A + +A + +
Sbjct: 92 LADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFSNRVKNVGASLVKQVANATN 151
Query: 287 AEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKELA 445
GDGTT +L + V G++ + R + A V +K +A
Sbjct: 152 DTAGDGTTCATVLTKAIFAEGCKSVAAGMNAMDLRRGISMAVDEVVTNLKGMA 204
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 45.6 bits (103), Expect = 2e-05
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Frame = +2
Query: 119 VVDAVRTTLGPRGMDKLIVDHSGKA-VISNDGATIMKLLDIVHPA----AKTLVDIAKSQ 283
+ DAV+ T+GP+G + +I++ S +A ++ DG T+ K ++ A A + +A++
Sbjct: 139 LADAVKVTMGPKGRN-VIIERSHRAPKVTKDGVTVAKSIEFEDSAKNVGANLVKQVAEAT 197
Query: 284 DAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKELAVTIDKK 463
+ GDGTT +L +L V GV+ + + A +K A I+
Sbjct: 198 NKVAGDGTTCATVLTQAILTEGCKAVAAGVNVMDLRNGINKAISSITTHLKSKAWIINSS 257
Query: 464 SPEEQ 478
Q
Sbjct: 258 EEINQ 262
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 43.2 bits (97), Expect = 1e-04
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Frame = +2
Query: 167 LIVDHSGKAVISNDGATIMKLLD----IVHPAAKTLVD----IAKSQDAEVGDGTTSVVI 322
+++D + NDG TI K ++ + H A L + IA ++ VGDGTT+ +I
Sbjct: 597 VVIDQDDVPKVINDGITIAKAIELPNAVEHAGAMLLQEHVNQIASKTNSSVGDGTTTAII 656
Query: 323 LAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKELAVTIDKK 463
LA E++ V G +P + + + A + +K + + K
Sbjct: 657 LAREIINLGLLAVATGANPVALRKGIDKAVHELIGILKTKCIPVSTK 703
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
Frame = +2
Query: 119 VVDAVRTTLGPR---------GMDKLIVDHSGKAVISNDGATIMKLLD----IVHPAAKT 259
+ DAV+ T+GP+ G + +I G ++ DG T+ K ++ + + A
Sbjct: 54 LADAVKVTMGPKIGLNVSIMQGRNVVIEQSYGSPKVTKDGVTVAKSIEFKDRVKNVGASL 113
Query: 260 LVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVGVHPRVIVRAVRTAAKLAVDKVKE 439
+ +A + + GDGTT +L + V G++ + R + A V +K
Sbjct: 114 VKQVANATNDTAGDGTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKG 173
Query: 440 LA 445
+A
Sbjct: 174 MA 175
>07_01_0595 -
4432642-4432926,4433062-4433769,4433964-4434164,
4434296-4435288
Length = 728
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 173 VDHSGKAVISNDGATIM-KLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAG 331
+ H + D A ++ +L D +HP T+ D+ DAE G+ ++ +L G
Sbjct: 45 IPHGHIEQCAEDPALLLSRLPDPIHPVPCTVADLVLDVDAESGEAYATISLLPG 98
>01_06_0629 + 30712268-30713023
Length = 251
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 239 VHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVG---VHPRVIVRAVRTA 409
VHPAA + A++ A GD + + + L+R R + G V V+V V
Sbjct: 26 VHPAANDDEEAARAAAAAAGDTAANKRPRSPQYLRRRRCVIWCGGCCVTSAVVVGIVILV 85
Query: 410 AKLAVDKVKELAVTIDKKSPE 472
L V KVK+ +T+++ + E
Sbjct: 86 LALTVFKVKDPELTMNRVTLE 106
>01_05_0687 + 24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -1
Query: 274 GNVDQSFCSRMHYIQQLHDGSSII*NHCFAAMIHYQLVHAPWAKCCADSINNQLAGIDVR 95
G V + C M+Y+ + H+ + HC A ++ Y AP KC ++ +VR
Sbjct: 1387 GYVHCTCCQTMNYVLEAHEVGKVHCGHC-ATLLMYPF-GAPAVKCSLCLFVTEIGERNVR 1444
Query: 94 YKLRL 80
+L +
Sbjct: 1445 RRLSI 1449
>01_05_0642 - 23883300-23884298
Length = 332
Score = 28.3 bits (60), Expect = 3.9
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -2
Query: 450 VTANSLTLSTANLAAVRTARTITLGWTPTSTNGLNLFRSSP-AKITTDVVPSPTSAS*DL 274
VT + + A+ AV R L +P S + +L P A++ + +P P + +
Sbjct: 67 VTESIASHRGASAVAVDDRRRRLLVASPGSVSAYDLRTPRPHARLFSATLPDPAAPPGGV 126
Query: 273 AMSTKVFAAGCTISNSFMMVAPSFEITALP 184
A+ AA T+ V+P ++ ALP
Sbjct: 127 AVDPHSGAAFLTVGARIYKVSPDGDLAALP 156
>02_04_0488 +
23397480-23397687,23397777-23397805,23398462-23398564,
23398811-23398982,23399380-23399440,23399757-23399889,
23400438-23400709,23400776-23400843,23401096-23401235,
23401413-23401499,23401580-23402088,23402173-23402990,
23403024-23403222,23403662-23403817
Length = 984
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 194 VISNDGAT-IMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVG 370
++ N G + I+ ++ + +++A +DA D + SV + GE++ R+ G
Sbjct: 177 LVENKGVSQIIAEFTLLVATEQAAMELAAGEDANGLDASNSVFLFVGEVISRVSRRGSTG 236
Query: 371 VHPRVIVRAVRTAAKLAVD 427
+ ++ +R+ K ++
Sbjct: 237 ILVAELIPRIRSHLKRCME 255
>02_04_0485 +
23338980-23339187,23339277-23339305,23339962-23340064,
23340311-23340482,23340880-23340940,23341257-23341389,
23341938-23342208,23342595-23342734,23342912-23342998,
23343078-23343586,23343671-23344488,23344522-23344720,
23345552-23345696,23345728-23345782,23347652-23347778,
23347867-23347936,23348448-23348553,23348636-23348747,
23349243-23349365,23349468-23349627,23349751-23349827,
23349925-23349977,23350151-23350205,23350500-23351174
Length = 1495
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 194 VISNDGAT-IMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEVG 370
++ N G + I+ ++ + +++A +DA D + SV + GE++ R+ G
Sbjct: 177 LVENKGVSQIIAEFTLLVATEQAAMELAAGEDANGLDASNSVFLFVGEVISRVSRRGSTG 236
Query: 371 VHPRVIVRAVRTAAKLAVD 427
+ ++ +R+ K ++
Sbjct: 237 ILVAELIPRIRSHLKRCME 255
>12_01_0670 + 5698852-5699061,5700894-5701316
Length = 210
Score = 27.1 bits (57), Expect = 8.9
Identities = 25/97 (25%), Positives = 34/97 (35%)
Frame = -2
Query: 498 HFPRSSLCSSGDFLSIVTANSLTLSTANLAAVRTARTITLGWTPTSTNGLNLFRSSPAKI 319
H P +C + L + AV TA G+ + S A
Sbjct: 62 HHPTCDICQEKTGYFFCLEDRALLCRSCDVAVHTATAHAAAHRRFLITGVRIGGSVDAAA 121
Query: 318 TTDVVPSPTSAS*DLAMSTKVFAAGCTISNSFMMVAP 208
DV+ SPTS+S A S AG +N+ AP
Sbjct: 122 AADVIVSPTSSSIAPAGSASSNHAGAAGNNNGRSPAP 158
>08_02_0073 + 11919938-11920060,11922325-11922939
Length = 245
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 377 PRVIVRAVRTAAKLAVDKVKELAVTIDKKSPEEQREL 487
PR + + VD+ + +T+DK +PE+Q++L
Sbjct: 53 PRSVKAKIHKLGLSEVDEGNIVLITLDKLTPEQQKDL 89
>07_03_1368 + 26079623-26079845,26079939-26080033,26080131-26080370
Length = 185
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 377 PRVIVRAVRTAAKLAVDKVKELAVTIDKKSPEEQREL 487
P I ++ VD+ + VT+DK +PE+Q++L
Sbjct: 14 PGSIKEKIQKLGLSEVDEANIVPVTLDKLTPEQQKDL 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,126,308
Number of Sequences: 37544
Number of extensions: 287073
Number of successful extensions: 802
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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