Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H03
         (302 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   3.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   6.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   6.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    19   8.7  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    19   8.7  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 159 VQRGLVGTIIERFEKKGFKLVGLKFVWP 242
           ++  L+ +  E FEK GF  + + + +P
Sbjct: 121 LRANLIASSFEYFEKYGFNGLDIDWEYP 148


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 180 TIIERFEKKGFKLV 221
           + +ER +K+GF++V
Sbjct: 495 SFVERVKKRGFEVV 508


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 253 NSSEGQTNFNPTNLKPFF 200
           NSSE  T   PT++  F+
Sbjct: 26  NSSEQLTTPTPTDINSFY 43


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 171 LVGTIIERFEKKGFKLVGLKFV 236
           L   I  +F    FKL G+K V
Sbjct: 352 LYNIISSKFRSGFFKLCGMKIV 373


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 179 AYKTTLNTIGLNHKKGSFTLISHYFK 102
           A KT+        K+G+ T+I H +K
Sbjct: 69  ALKTSCAKCTDKQKQGAKTVIQHLYK 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,933
Number of Sequences: 336
Number of extensions: 1072
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)