Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H02
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65180.2 68418.m08199 expressed protein contains Pfam domain,... 39 0.002
At5g65180.1 68418.m08198 expressed protein contains Pfam domain,... 39 0.002
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 38 0.005
At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont... 37 0.007
At3g28790.1 68416.m03593 expressed protein 37 0.009
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 37 0.009
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 35 0.028
At2g42470.1 68415.m05254 meprin and TRAF homology domain-contain... 35 0.028
At1g50660.1 68414.m05696 expressed protein similar to liver stag... 35 0.028
At3g52300.1 68416.m05748 ATP synthase D chain-related contains w... 35 0.037
At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7... 35 0.037
At1g69070.1 68414.m07903 expressed protein 35 0.037
At1g68910.1 68414.m07886 expressed protein similar to Myosin hea... 34 0.049
At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF038... 34 0.049
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 34 0.065
At5g59390.1 68418.m07442 XH/XS domain-containing protein contain... 33 0.15
At4g02710.1 68417.m00366 kinase interacting family protein simil... 33 0.15
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 32 0.26
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 31 0.35
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 31 0.35
At4g21020.1 68417.m03041 late embryogenesis abundant domain-cont... 31 0.35
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 31 0.35
At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesi... 31 0.46
At2g48120.1 68415.m06024 pale cress protein (PAC) identical to P... 31 0.46
At2g43650.1 68415.m05425 Sas10/U3 ribonucleoprotein (Utp) family... 31 0.46
At5g25070.1 68418.m02971 expressed protein 31 0.61
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 31 0.61
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 31 0.61
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 31 0.61
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 31 0.61
At3g58840.1 68416.m06558 expressed protein 31 0.61
At1g03080.1 68414.m00282 kinase interacting family protein simil... 31 0.61
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 30 0.80
At2g47350.1 68415.m05911 PAPA-1-like family protein / zinc finge... 30 0.80
At2g46180.1 68415.m05742 intracellular protein transport protein... 30 0.80
At5g47800.1 68418.m05904 phototropic-responsive NPH3 family prot... 30 1.1
At4g09300.1 68417.m01538 expressed protein 30 1.1
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 29 1.4
At1g55805.1 68414.m06392 BolA-like family protein contains Pfam ... 29 1.4
At1g33890.1 68414.m04201 avirulence-responsive protein, putative... 29 1.4
At5g47690.1 68418.m05887 expressed protein 29 1.9
At3g10710.1 68416.m01289 pectinesterase family protein contains ... 29 1.9
At3g03450.1 68416.m00343 gibberellin response modulator, putativ... 29 1.9
At2g24250.1 68415.m02896 F-box family protein contains Pfam:PF00... 29 1.9
At1g66840.1 68414.m07597 expressed protein contains Pfam profile... 29 1.9
At1g64180.1 68414.m07270 intracellular protein transport protein... 29 1.9
At1g17870.1 68414.m02211 expressed protein contains 6 transmembr... 29 1.9
At5g67240.1 68418.m08475 exonuclease family protein contains exo... 29 2.5
At5g60150.1 68418.m07540 expressed protein ; expression supporte... 29 2.5
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 29 2.5
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 28 3.2
At1g59540.1 68414.m06694 kinesin motor protein-related similar t... 28 3.2
At1g23080.2 68414.m02886 auxin efflux carrier protein, putative ... 28 3.2
At1g23080.1 68414.m02885 auxin efflux carrier protein, putative ... 28 3.2
At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa... 28 3.2
At4g04130.1 68417.m00583 Ulp1 protease family protein contains P... 28 4.3
At4g03400.1 68417.m00462 auxin-responsive GH3 family protein sim... 28 4.3
At2g28315.1 68415.m03441 transporter-related low similarity to S... 28 4.3
At2g02590.1 68415.m00199 expressed protein 28 4.3
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 28 4.3
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 27 5.7
At4g27595.1 68417.m03964 protein transport protein-related low s... 27 5.7
At4g11080.1 68417.m01800 high mobility group (HMG1/2) family pro... 27 5.7
At4g01180.1 68417.m00156 XH/XS domain-containing protein contain... 27 5.7
At3g42180.1 68416.m04335 exostosin family protein contains Pfam ... 27 5.7
At2g02630.1 68415.m00202 DC1 domain-containing protein contains ... 27 5.7
At2g01820.1 68415.m00113 leucine-rich repeat protein kinase, put... 27 5.7
At1g70940.1 68414.m08184 auxin transport protein, putative (PIN3... 27 5.7
At1g48610.1 68414.m05437 AT hook motif-containing protein contai... 27 5.7
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 27 5.7
At3g53040.1 68416.m05846 late embryogenesis abundant protein, pu... 27 7.5
At3g21260.2 68416.m02687 glycolipid transfer protein-related con... 27 7.5
At3g21260.1 68416.m02686 glycolipid transfer protein-related con... 27 7.5
At3g19670.1 68416.m02492 FF domain-containing protein / WW domai... 27 7.5
At3g10120.1 68416.m01214 expressed protein 27 7.5
At2g36680.2 68415.m04500 expressed protein 27 7.5
At2g36680.1 68415.m04499 expressed protein 27 7.5
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 7.5
At1g76500.1 68414.m08901 DNA-binding family protein contains Pfa... 27 7.5
At5g11430.1 68418.m01335 transcription elongation factor-related... 27 9.9
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 27 9.9
At2g47230.1 68415.m05898 agenet domain-containing protein contai... 27 9.9
At1g80400.1 68414.m09412 zinc finger (C3HC4-type RING finger) fa... 27 9.9
At1g49890.1 68414.m05593 expressed protein contains Pfam domain,... 27 9.9
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 27 9.9
>At5g65180.2 68418.m08199 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 311
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +1
Query: 10 ISEQFNAIVNSKNTESLNKALKEGS-DSMVQQVSELSNSLQGALTDANGKAKEVLQQARQ 186
+SE+ + N E+ N+ + S V+++ ++ ++ A + A KE L + +
Sbjct: 39 VSEKIVSAFNLVRAENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELE 98
Query: 187 NLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQ 348
E + + VE+ T+L L+ A++ E +NL ++ V +QT +
Sbjct: 99 EEENILRQSVEKLKSVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTEE 152
>At5g65180.1 68418.m08198 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 439
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +1
Query: 10 ISEQFNAIVNSKNTESLNKALKEGS-DSMVQQVSELSNSLQGALTDANGKAKEVLQQARQ 186
+SE+ + N E+ N+ + S V+++ ++ ++ A + A KE L + +
Sbjct: 167 VSEKIVSAFNLVRAENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELE 226
Query: 187 NLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQ 348
E + + VE+ T+L L+ A++ E +NL ++ V +QT +
Sbjct: 227 EEENILRQSVEKLKSVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTEE 280
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +1
Query: 70 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 249
L E DS V+ L G +A GKA E A++N+E+ E R+ ++ +
Sbjct: 260 LGELKDSAVETAKRAMGFLSGKTEEAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGK 319
Query: 250 ALHE----KLQTAIQNTLKESQNLAKEVGVNMDQTS 345
L E K Q A Q T + +++ A++ D +
Sbjct: 320 ELKEEAGAKAQEASQKTRESTESGAQKAEETKDSAA 355
>At3g17520.1 68416.m02238 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to PIR|S04045|S04045 embryonic
abundant protein D-29 [Gossypium hirsutum]; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 298
Score = 37.1 bits (82), Expect = 0.007
Identities = 26/113 (23%), Positives = 48/113 (42%)
Frame = +1
Query: 82 SDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHE 261
S ++ + VSE + + A G AKE L + + + D+ A + ++ E
Sbjct: 171 SPNLGETVSEKAKEAKEAAKRKAGDAKEKLAETVETAKEKASDMTSAAKEKAEKLKEEAE 230
Query: 262 KLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKV 420
+ + + +KES AK D+T + K +YD + +EE + V
Sbjct: 231 RESKSAKEKIKESYETAKS---KADETLESAKDKASQSYDSAARKSEEAKDTV 280
Score = 33.5 bits (73), Expect = 0.086
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Frame = +1
Query: 16 EQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDAN--GKAKEVLQQARQN 189
E+ A V K ++S + A + D + + ++ +SL G D + G AKE + ++
Sbjct: 110 EEGLASVKDKASQSYDSA-GQVKDDVSHKSKQVKDSLSGDENDESWTGWAKEKIGIKNED 168
Query: 190 LERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLK 369
+ +L + + K+A ++ + L E+ AKE +M +++ A KLK
Sbjct: 169 INSP--NLGETVSEKAKEAKEAAKRKAGDAKEKLAETVETAKEKASDMTSAAKEKAEKLK 226
Query: 370 AAYDDFVKHAEEVQKKVHEAA-TKQ*RALIARRVALSLRYNS 492
+ K A+E K+ +E A +K L + + S Y+S
Sbjct: 227 EEAERESKSAKEKIKESYETAKSKADETLESAKDKASQSYDS 268
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 36.7 bits (81), Expect = 0.009
Identities = 28/112 (25%), Positives = 46/112 (41%)
Frame = +1
Query: 67 ALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQA 246
A +S Q E SNS + + + KEV Q + + +L K + +
Sbjct: 413 ASASAEESAASQKKE-SNSKSSSSSSSTTSVKEVETQTSSEVNSFISNLEKKYTG-NSEL 470
Query: 247 TALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAE 402
EKL+T++ + K S + AKE+ M + K+A + F K E
Sbjct: 471 KVFFEKLKTSMSASAKLSTSNAKELVTGMRSAASKIAEAMMFVSSRFSKSEE 522
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 36.7 bits (81), Expect = 0.009
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Frame = +1
Query: 67 ALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDV---- 234
AL++ + ++V EL++ L+ K++ + Q + VEDLR A D+
Sbjct: 902 ALQDAKTKLEKEVEELTSCLE--------LEKQMRMELEQVKTQEVEDLRSALNDMKLQL 953
Query: 235 -EKQATALHE--KLQTAIQNTLKESQNLAKEVGVNMDQTSQK-----LAPKLKAAYDDFV 390
E Q T E KLQ+A+Q+ E + LAKE+ + D ++ L L+ D+
Sbjct: 954 GETQVTKSEEILKLQSALQDMQLEFEELAKELEMTNDLAAENEQLKDLVSSLQRKIDESD 1013
Query: 391 KHAEEVQKKVHEAATKQ*RALIARRVALSL 480
EE K+ E KQ +I + V + L
Sbjct: 1014 SKYEET-SKLSEERVKQEVPVIDQGVIIKL 1042
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 35.1 bits (77), Expect = 0.028
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Frame = +1
Query: 13 SEQFNAIVNSKNTESLNK-------------ALKEGSDSMVQQVSELSNSLQGALT---D 144
+E+ N ++SKN E++NK L + DS ++ SELS+ ++ T D
Sbjct: 180 AEEENKAISSKNVETMNKLEQTQNTIQELMAELGKLKDSHREKESELSSLVEVHETHQRD 239
Query: 145 ANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVG 324
++ KE+ +Q ++ ++ V +L + + E++ L +K+ + N +KE+QN +E+
Sbjct: 240 SSIHVKELEEQV-ESSKKLVAELNQTLNNAEEEKKVLSQKI-AELSNEIKEAQNTIQELV 297
Query: 325 VNMDQTSQKLAPK---LKAAYDDFVKHAEEVQKKVHE 426
Q + + K L + D H E +V E
Sbjct: 298 SESGQLKESHSVKDRDLFSLRDIHETHQRESSTRVSE 334
>At2g42470.1 68415.m05254 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein contains Pfam
profile PF00917: MATH domain
Length = 898
Score = 35.1 bits (77), Expect = 0.028
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Frame = +1
Query: 4 EAISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQAR 183
++ISE + V+S+ TE K + + ++ E+ + + A +A+G + L++
Sbjct: 705 QSISETELSNVHSELTELTEVGFK--LEWLKAKLEEVCVAFKKA--NADGCRIQQLEEHV 760
Query: 184 QNLERTVEDLRKAHPDVEK-QATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAP 360
+NLE+TV DL K D EK ++TA L+ + + E L KE N T + L
Sbjct: 761 KNLEQTVSDL-KVEMDKEKAKSTAKVLSLEDTLSDLKTE---LGKEKAKNATATDKFLL- 815
Query: 361 KLKAAYDDFVKHAEEVQKKVHEAATK 438
LK Y D E+ + K AA K
Sbjct: 816 -LKDTYSDLKVELEKEKAKSTSAAAK 840
>At1g50660.1 68414.m05696 expressed protein similar to liver stage
antigen-1 (GI:510184) [Plasmodium falciparum]; similar
to Myosin II heavy chain, non muscle (Swiss-Prot:P08799)
[Dictyostelium discoideum]; similar to liver stage
antigen (GI:9916) [Plasmodium falciparum]; similar to
Kinesin-like protein KLPA (Swiss-Prot:P28739)
[Emericella nidulans]
Length = 725
Score = 35.1 bits (77), Expect = 0.028
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Frame = +1
Query: 85 DSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 264
D V VS L +SL+ L +A+ + +++ + R + ++ + LRK + + HEK
Sbjct: 230 DQQVNAVS-LVSSLEAELEEAHARIEDLESEKRSHKKKLEQFLRKVSEERAAWRSREHEK 288
Query: 265 LQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKL---KAAYDDFVKHAEEVQK 414
++ AI + +K N K+ ++ + KL +L K A +++ E+ +K
Sbjct: 289 VR-AIIDDMKTDMNREKKTRQRLEIVNHKLVNELADSKLAVKRYMQDYEKERK 340
>At3g52300.1 68416.m05748 ATP synthase D chain-related contains weak
similarity to ATP synthase D chain, mitochondrial (EC
3.6.3.14) (Swiss-Prot:P31399) [Rattus norvegicus]
Length = 168
Score = 34.7 bits (76), Expect = 0.037
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +1
Query: 217 KAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKH 396
K P+ + + AL +L+ A Q +LKES+ L KE+ ++ + S+KL+ Y F KH
Sbjct: 94 KVTPEYKPKFDALLVELKEAEQKSLKESERLEKEI-ADVQEISKKLSTMTADEY--FEKH 150
Query: 397 AEEVQK 414
E +K
Sbjct: 151 PELKKK 156
>At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7)
(SOS1) identical to putative Na+/H+ antiporter SOS1
[Arabidopsis thaliana] gi|8515714|gb|AAF76139; Member of
The Monovalent Cation:Proton Antiporter (CPA1) Family,
PMID:11500563
Length = 1146
Score = 34.7 bits (76), Expect = 0.037
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Frame = +1
Query: 1 HEAISEQFNAIVNSKNTESL--NKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 174
H +Q + N S+ N++ KEG ++ + + ++ +S L K K+V
Sbjct: 626 HTIARQQLYDFLGESNIGSIVINESEKEGEEAK-KFLEKVRSSFPQVLRVV--KTKQVTY 682
Query: 175 QARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKL 354
+L +E+L K EK+ LH+ +QT ++ L+ + + K ++ TS L
Sbjct: 683 SVLNHLLGYIENLEKVGLLEEKEIAHLHDAVQTGLKKLLR-NPPIVKLPKLSDMITSHPL 741
Query: 355 APKLKAAYDDFVKHAEEVQKKV 420
+ L A+ + +KH+++ K+
Sbjct: 742 SVALPPAFCEPLKHSKKEPMKL 763
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 34.7 bits (76), Expect = 0.037
Identities = 19/82 (23%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 4 EAISEQFNAIVNSKNTESLNK---ALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 174
+ + + F ++VNS+ ESL K A + D + ++++S ++ ++ +E+ Q
Sbjct: 222 DELDKNFKSLVNSEAMESLTKPFVAEENTRDPYLLSLNDMSMEIRARPSERTKTPEEIAQ 281
Query: 175 QARQNLERTVEDLRKAHPDVEK 240
+ R+ LE E+ +K + E+
Sbjct: 282 KEREKLEALEEERKKRMQETEE 303
>At1g68910.1 68414.m07886 expressed protein similar to Myosin heavy
chain, nonmuscle type B (Cellular myosin heavy chain,
type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B)
(Swiss-Prot:Q27991) [Bos taurus]; contains 1
transmembrane domain
Length = 627
Score = 34.3 bits (75), Expect = 0.049
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Frame = +1
Query: 4 EAISEQFNAIVNSKNTESLNKALKEGSD-------SMVQQVSELSNSLQGAL--TDANGK 156
EA ++ +A N + TE LN LK+ D S+ +QV EL +Q + ++AN +
Sbjct: 370 EAKIKELDA-ANLELTEELN-FLKDADDKKTKKVNSLEKQVRELEVQVQNSKVSSEANQE 427
Query: 157 AKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMD 336
+ +L A ++E +EDL+ E + + E Q + +T N K+V +
Sbjct: 428 QQNMLYSAIWDMETLIEDLKSKASKAESRTETVEE--QCIVLSTTNSELN--KDVSF-LR 482
Query: 337 QTSQKLAPKLKAAYDDFVKHAEEV 408
Q ++ L L A ++ ++A+E+
Sbjct: 483 QKAKSLEAMLDLANNEKERYAQEI 506
>At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF03800:
Nuf2 family domain; similar to Myosin-like protein NUF2
(Nuclear filament-containing protein 2) (Nuclear
division protein nuf2) (Swiss-Prot:Q10173)
[Schizosaccharomyces pombe]
Length = 974
Score = 34.3 bits (75), Expect = 0.049
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +1
Query: 7 AISEQFNAIVNSKNTESLNKALKE--GSDSMVQQVSE---LSNSLQGALTDANGKAKEVL 171
AI E F + N+K E KALK+ D + + E + G L N K++
Sbjct: 281 AILEVFEKVTNAKTVEKEFKALKDKLSEDGVAYKSLEAKVVERERIGKLEQLNESLKQLE 340
Query: 172 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTL-KESQNLAKEVGVNMDQTSQ 348
++ + + L + +VE + L E QT +++ + N AK V Q+ +
Sbjct: 341 KEKAVMFDDWTKQLNELKVEVESRRREL-ETRQTNVESVVAMVDDNTAKTNQVR--QSGE 397
Query: 349 KLAPKLKAAYDDFVK 393
KL A Y++ VK
Sbjct: 398 AKVKKLAAKYEEIVK 412
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 33.9 bits (74), Expect = 0.065
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Frame = +1
Query: 37 NSKNTESLNKALK-EGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 213
N K TES + K + ++ +++ +L++ G + ++ L + + NLE T+E+L
Sbjct: 377 NQKETESSDLVEKLKTHENQIEEYKKLAHEASGVADTRKVELEDALSKLK-NLESTIEEL 435
Query: 214 RKAHPDVEKQATALHE---KLQTAIQNTLKESQNLAKEVG---VNMDQTSQKLAPKLKAA 375
+EK++ L E KL + N E+ L ++ +QT+ +L K
Sbjct: 436 GAKCQGLEKESGDLAEVNLKLNLELANHGSEANELQTKLSALEAEKEQTANELEAS-KTT 494
Query: 376 YDDFVKHAEEVQKKV 420
+D K +K+
Sbjct: 495 IEDLTKQLTSEGEKL 509
>At5g59390.1 68418.m07442 XH/XS domain-containing protein contains
Pfam domain PF03469: XH domain and PF03468: XS domain
Length = 561
Score = 32.7 bits (71), Expect = 0.15
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +1
Query: 10 ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN 189
++E+ A + K E L+K + E ++ + + EL ++ N V ++
Sbjct: 299 LAEKHQASSSLKEKEKLHKRIME-MEAKLNETQELELEIEKLKGTTNVMKHMVGSDGDKD 357
Query: 190 LERTVEDLRKAHPDVEKQATALHEKLQTAIQN---TLKESQNLAKEV 321
+ VE + K ++ Q TALHEK+ T + T E Q++ KE+
Sbjct: 358 I---VEKIAKTQIQLDAQETALHEKMMTLARKERATNDEYQDVLKEM 401
>At4g02710.1 68417.m00366 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 32.7 bits (71), Expect = 0.15
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 175 QARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQN-LAKEVGVNMDQTSQK 351
Q +NL+ TVEDL+ VEK+ T + E I+ L+E + + K VN T++
Sbjct: 960 QKLENLQITVEDLKSKVETVEKEKTKVGENEYKTIKGQLEEGEEAIEKLFTVNRKLTTKA 1019
Query: 352 LAPKLKAAYDDFVKHAEEVQKKV 420
+ K +HA +K+
Sbjct: 1020 ESEKDIDRRRRIFEHARRGTEKI 1042
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 31.9 bits (69), Expect = 0.26
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +1
Query: 43 KNTESLNKALKEGSDSMVQQVSE-LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRK 219
K TE N LK+ ++ + + + L+G L +E++Q R ++ER +DL
Sbjct: 544 KKTEQEN--LKKKHKKIIDECKDRIRGVLKGRLPPEKDMKREIVQALR-SIEREYDDLSL 600
Query: 220 AHPDVEKQATALHEKLQTAIQNTLKESQN 306
+ EK+ L K+Q + K +++
Sbjct: 601 KSREAEKEVNMLQMKIQEVNNSLFKHNKD 629
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 31.5 bits (68), Expect = 0.35
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Frame = +1
Query: 16 EQFNAIVNSKN-TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEV-----LQQ 177
E+ + I K ++ N+ L E D ++Q ++EL + G EV LQ+
Sbjct: 14 EESHVIKEDKELNDASNETLTENGDQLLQMIAELRLENDFLRSQFEGLKDEVAQGRSLQK 73
Query: 178 ARQ---------NLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVN 330
A Q L+ V L + DVEKQ E+ ++ E+ ++E
Sbjct: 74 AEQVEADSAQLKQLQEQVASLSR-EIDVEKQTRVAAEQALEHLREAYSEADAKSQEYSSK 132
Query: 331 MDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATKQ*RALIARRVALSLRY 486
Q QKL ++K D+ + ++H+ A ++ + + + L R+
Sbjct: 133 FSQVEQKLDQEIKER-DEKYADLDAKFTRLHKRAKQRIQEIQKEKDDLDARF 183
Score = 30.7 bits (66), Expect = 0.61
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +1
Query: 43 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK------EVLQQARQNLERTV 204
+ + N+ALK D+ QQ+ +N L+ + + G + E LQQ+ + ++ +
Sbjct: 206 RTRQQANEALK-AMDAERQQLRSANNKLRDTIEELRGSLQPKENKIETLQQSLLDKDQIL 264
Query: 205 EDLRKAHPDVEKQATALHEKLQTAIQNTLK 294
EDL+K VE++ +L Q L+
Sbjct: 265 EDLKKQLQAVEERKQIAVTELSAKHQKNLE 294
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 31.5 bits (68), Expect = 0.35
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Frame = +1
Query: 16 EQFNAIVNSKN-TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEV-----LQQ 177
E+ + I K ++ N+ L E D ++Q ++EL + G EV LQ+
Sbjct: 14 EESHVIKEDKELNDASNETLTENGDQLLQMIAELRLENDFLRSQFEGLKDEVAQGRSLQK 73
Query: 178 ARQ---------NLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVN 330
A Q L+ V L + DVEKQ E+ ++ E+ ++E
Sbjct: 74 AEQVEADSAQLKQLQEQVASLSR-EIDVEKQTRVAAEQALEHLREAYSEADAKSQEYSSK 132
Query: 331 MDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATKQ*RALIARRVALSLRY 486
Q QKL ++K D+ + ++H+ A ++ + + + L R+
Sbjct: 133 FSQVEQKLDQEIKER-DEKYADLDAKFTRLHKRAKQRIQEIQKEKDDLDARF 183
Score = 30.7 bits (66), Expect = 0.61
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +1
Query: 43 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK------EVLQQARQNLERTV 204
+ + N+ALK D+ QQ+ +N L+ + + G + E LQQ+ + ++ +
Sbjct: 206 RTRQQANEALK-AMDAERQQLRSANNKLRDTIEELRGSLQPKENKIETLQQSLLDKDQIL 264
Query: 205 EDLRKAHPDVEKQATALHEKLQTAIQNTLK 294
EDL+K VE++ +L Q L+
Sbjct: 265 EDLKKQLQAVEERKQIAVTELSAKHQKNLE 294
>At4g21020.1 68417.m03041 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to SP|P23283 Desiccation-related
protein {Craterostigma plantagineum}; contains Pfam
profile PF02987: Late embryogenesis abundant protein
Length = 266
Score = 31.5 bits (68), Expect = 0.35
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Frame = +1
Query: 22 FNAIVNSKN-TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLER 198
+NA +K+ E + EG+ + + + D AKE + A++ ++
Sbjct: 119 YNAKEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKARHAKEKVKE 178
Query: 199 TVEDLR-KAH---PDVEKQATALHEKLQTAIQNTLKESQNLAK---EVGVNMDQTSQKL- 354
ED + KA V+ +A L EK + ++ + ++N A+ E V ++ ++K
Sbjct: 179 YGEDTKEKAEGFKETVKGKAEELGEKTKETVKGAWESTKNAAQTVTEAVVGPEEDAEKAR 238
Query: 355 APKLKAAYDDFVKHAEEVQKK 417
A K D K AE+ QK+
Sbjct: 239 ADMNKGVEDHRKKKAEKDQKE 259
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 31.5 bits (68), Expect = 0.35
Identities = 19/97 (19%), Positives = 51/97 (52%)
Frame = +1
Query: 130 GALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNL 309
G +TD + +++ R+ +++ +E +++ PD +KQA E + L+ ++N+
Sbjct: 172 GGITDWKAHKIQTIER-RKTVDQELEKIQEDMPDYKKQAVVAEEAKHQVVME-LERTRNV 229
Query: 310 AKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKV 420
+E+ + +++ ++K + K D EE+++ +
Sbjct: 230 VEELKLELEK-AEKEEQQAKQDSDLAKLRVEEMEQGI 265
>At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesin
like protein A, Arabidopsis thaliana, gb:Q07970
Length = 790
Score = 31.1 bits (67), Expect = 0.46
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 12/137 (8%)
Frame = +1
Query: 52 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEV---LQQARQNLERTVEDLRKA 222
E L +L+E D + ++ + +L D + +E LQQ L+ +E R+A
Sbjct: 188 EKLQVSLREELDKVKEEKMAAKQKVT-SLEDMYKRLQEYNTSLQQYNTKLQTDLEVAREA 246
Query: 223 HPDVEKQATALHEKLQT------AIQNTLKESQNLAKEVGVNMDQTSQK---LAPKLKAA 375
H EK+ +++ E L T ++Q+ L S+ E D + L +L+
Sbjct: 247 HTRAEKEKSSILENLTTLRGHSKSLQDQLASSRVSQDEAVKQKDSLLMEVNNLQSELQQV 306
Query: 376 YDDFVKHAEEVQKKVHE 426
DD +H + QK E
Sbjct: 307 RDDRDRHVVQSQKLAGE 323
>At2g48120.1 68415.m06024 pale cress protein (PAC) identical to PAC
[Arabidopsis thaliana] gi|1483213|emb|CAA65334
Length = 313
Score = 31.1 bits (67), Expect = 0.46
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 313 KEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATK 438
+E+G + + ++ K + F++ AEEV++++ EAA K
Sbjct: 93 REIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERIEEAAEK 134
>At2g43650.1 68415.m05425 Sas10/U3 ribonucleoprotein (Utp) family
protein contains Pfam profile PF04000: Sas10/Utp3
family; contains Prosite PS00761: Signal peptidases I
signature 3; weak similarity to PEBP2 beta-binding
protein / charged amino acid rich leucine zipper
factor-1 (GI:12061569) [Mus musculus]
Length = 654
Score = 31.1 bits (67), Expect = 0.46
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Frame = +1
Query: 52 ESLNKALKEGSDSMVQQVSELSNSLQGA---LTDANGKAKEVLQQARQNLERTVEDLRKA 222
ESL +++ G+ V + +L++ + + +T K ++ AR+ ++ E +
Sbjct: 337 ESLARSIANGAVQKVVKEDQLTSPVSDSVDRITQDTAKPMKI-DNAREEKKKKGEKRKHQ 395
Query: 223 HPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVN-MDQTSQKLAPKLKAAYDDFVKHA 399
+ V+ Q+ + KL+ A++ L+ + L V + Q QKLA + +DD+V A
Sbjct: 396 NDLVDVQSEEML-KLRAALEGKLRTNGVLGSTVSKSDKAQKRQKLANRKLETFDDYVDDA 454
Query: 400 E 402
+
Sbjct: 455 D 455
>At5g25070.1 68418.m02971 expressed protein
Length = 736
Score = 30.7 bits (66), Expect = 0.61
Identities = 23/102 (22%), Positives = 52/102 (50%)
Frame = +1
Query: 112 LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTL 291
L+ L+G++ + + K KE+LQ+ +++L +E+L EK+ +++ A++ +
Sbjct: 364 LNGILEGSV-EQDMKEKEILQKKKEHLANELEELLALVKAKEKEIDENDSQIE-AVEERI 421
Query: 292 KESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKK 417
KE+ +MD K+ ++A + K E++ +K
Sbjct: 422 NNVVTGFKELQTSMD----KMLNDVQAGLTEVDKETEDLSRK 459
Score = 27.5 bits (58), Expect = 5.7
Identities = 22/106 (20%), Positives = 45/106 (42%)
Frame = +1
Query: 52 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 231
+++ ++E S + E + L+ TDA A +L++A +E D
Sbjct: 283 DAIESKMEEVLLSQIAAEEESACLLRSFGTDAENDAGSILEKAEAFYSDEMEKWHSCSED 342
Query: 232 VEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLK 369
VE + L +++ + + ++ S N E V D +++ K K
Sbjct: 343 VEVRKVEL--DIESVVVDNVRLSLNGILEGSVEQDMKEKEILQKKK 386
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 30.7 bits (66), Expect = 0.61
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 124 LQGALTDANGKAKEVLQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKE 297
LQ L D N + E ++ + ++ D + A DVE + T EK + T+ E
Sbjct: 708 LQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTVGE 767
Query: 298 SQNLAKEVGVN 330
LAKE G N
Sbjct: 768 KVQLAKEEGAN 778
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 30.7 bits (66), Expect = 0.61
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 124 LQGALTDANGKAKEVLQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKE 297
LQ L D N + E ++ + ++ D + A DVE + T EK + T+ E
Sbjct: 706 LQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTVGE 765
Query: 298 SQNLAKEVGVN 330
LAKE G N
Sbjct: 766 KVQLAKEEGAN 776
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 30.7 bits (66), Expect = 0.61
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 124 LQGALTDANGKAKEVLQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKE 297
LQ L D N + E ++ + ++ D + A DVE + T EK + T+ E
Sbjct: 708 LQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTVGE 767
Query: 298 SQNLAKEVGVN 330
LAKE G N
Sbjct: 768 KVQLAKEEGAN 778
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 30.7 bits (66), Expect = 0.61
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 124 LQGALTDANGKAKEVLQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKE 297
LQ L D N + E ++ + ++ D + A DVE + T EK + T+ E
Sbjct: 708 LQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTVGE 767
Query: 298 SQNLAKEVGVN 330
LAKE G N
Sbjct: 768 KVQLAKEEGAN 778
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 30.7 bits (66), Expect = 0.61
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 18/139 (12%)
Frame = +1
Query: 52 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANG---KAKEVLQQAR---------QNLE 195
E KAL+ S V+ +E+SN +T NG A+EV + + + E
Sbjct: 82 EEEKKALEAISTRAVELETEVSNLHDDLITSLNGVDKTAEEVAELKKALAEIVEKLEGCE 141
Query: 196 RTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKE------SQNLAKEVGVNMDQTSQKLA 357
+ E LRK +VEK+ L K+ ++E S+ +E+ + ++L
Sbjct: 142 KEAEGLRKDRAEVEKRVRDLERKIGVLEVREMEEKSKKLRSEEEMREIDDEKKREIEELQ 201
Query: 358 PKLKAAYDDFVKHAEEVQK 414
+ + VK+ EE++K
Sbjct: 202 KTVIVLNLELVKNVEELKK 220
>At1g03080.1 68414.m00282 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 30.7 bits (66), Expect = 0.61
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +1
Query: 10 ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDAN--GKAKEVLQQAR 183
IS +A NSK N L+ + ++ EL + L+ + K L R
Sbjct: 719 ISRLQSATENSKKLSEENMVLENSLFNANVELEELKSKLKSLEESCHLLNDDKTTLTSER 778
Query: 184 QNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMD 336
++L ++ +RK D+EK+ L K+ + + S +E+GV+++
Sbjct: 779 ESLLSHIDTMRKRIEDLEKEHAELKVKV-LELATERESSLQKIEELGVSLN 828
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 30.3 bits (65), Expect = 0.80
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +1
Query: 157 AKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA----KEVG 324
A+ L++ + N+E+ +++K + L + Q + KES LA K+ G
Sbjct: 421 ARRELEEVKANIEKAASEVKKLKIIAGSLQSELGRERQDLEETKQKESTGLARTNDKDAG 480
Query: 325 VNMDQTSQKLAPKLKAAYD 381
+ +T++KL K A D
Sbjct: 481 EELVETAKKLEQATKEAED 499
>At2g47350.1 68415.m05911 PAPA-1-like family protein / zinc finger
(HIT type) family protein contains Pfam domains,
PF04795: PAPA-1-like conserved region and PF04438: HIT
zinc finger
Length = 486
Score = 30.3 bits (65), Expect = 0.80
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Frame = +1
Query: 4 EAISEQFNAIVN-SKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA 180
+A+SEQ + ++ ++ E+ + + G+D+ + S Q AL A +
Sbjct: 274 KAVSEQASEDMDCAEEIETASDEKEIGNDNKRESTM---TSRQRALASGRSSAIDFSDGL 330
Query: 181 RQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAP 360
R E L + ++K A K+Q I+ +ES+ A + + D + +K
Sbjct: 331 PPTSRRKKETLSEMEQQLKKAEAAQRRKVQ--IEKAARESEEGAIKKILGQDSSRKKRGD 388
Query: 361 KLKAAYDDFVK 393
K+K DD +
Sbjct: 389 KIKKRLDDLAQ 399
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 30.3 bits (65), Expect = 0.80
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +1
Query: 16 EQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDAN----GKAKEVLQQAR 183
EQ ++ +N + +NKAL++ ++ + + SEL +L+ + + K+ E L +
Sbjct: 273 EQHAFGISRENLKEVNKALEKENNELKLKRSELEAALEASQKSTSRKLFPKSTEDLSRHL 332
Query: 184 QNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAK 315
+L+ D+EK L ++L+ A + K Q L +
Sbjct: 333 SSLDEEKAGTFPGKEDMEKSLQRLEKELEEARREKDKARQELKR 376
>At5g47800.1 68418.m05904 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 559
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 19 QFNAIVNSKNTESLNKALKEGS--DSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 192
Q +A ++S NT+ L+ K DS +Q V++ + + ++ +Q+ L
Sbjct: 357 QSSAHLSSNNTQLLHSIRKVAKLIDSYLQAVAQDVHMPVSKFVSLSEAVPDIARQSHDRL 416
Query: 193 ERTVEDLRKAHPDVEKQ 243
+ + K HP++ K+
Sbjct: 417 YKAINIFLKVHPEISKE 433
>At4g09300.1 68417.m01538 expressed protein
Length = 224
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/95 (20%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = +1
Query: 31 IVNSKNTESLNKALKEGSDSMVQQVSELSNSL-QGALTDANGKAKEVLQQARQNLERTVE 207
++ N +N + EG ++ E S ++ + L N + + + +NLE +E
Sbjct: 23 LIEDMNRLVMNLLVAEGYREAAEKFKEESITMPEEDLASMNERLEVIKAIESRNLEDAIE 82
Query: 208 DLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA 312
L +P++ K + LH+++ + K + +A
Sbjct: 83 KLNALNPEIIKTSFHLHQQMLIELIREKKTEEAVA 117
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +1
Query: 187 NLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVN 330
N+ RTV ++ HP+ + + + + E + + L+E+ L + V +N
Sbjct: 12 NVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At1g55805.1 68414.m06392 BolA-like family protein contains Pfam
profile: PF01722 BolA-like protein
Length = 160
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 46 NTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAH 225
N+ES K+ GS S+ E + S GA+ + + +E LQ+ + +E +ED+ H
Sbjct: 37 NSES--KSTGTGSRSVAMSSVEKTGSDSGAIENRASRMREKLQKELEPVELVIEDVSYQH 94
>At1g33890.1 68414.m04201 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 334
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +1
Query: 58 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 237
+ K L+ D+ + Q+ ++ ++ + A+ + +L + +N R DLRKAH +
Sbjct: 245 MKKELQMEHDTRMSQMEDMVKNMLKETSAAHERMVSMLNENLENAHRENIDLRKAHDHEQ 304
Query: 238 KQ 243
K+
Sbjct: 305 KK 306
>At5g47690.1 68418.m05887 expressed protein
Length = 1638
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 19 QFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 162
+++ + +ES K+LKEG D ++V LQ A T+++G A+
Sbjct: 1554 EYSGEAGEEKSESEGKSLKEGEDD--EEVVNKEEDLQEAKTESSGDAE 1599
>At3g10710.1 68416.m01289 pectinesterase family protein contains
similarity to pectinesterase GB:AAB57671 [Citrus
sinensis]; contains Pfam profile: PF01095 pectinesterase
Length = 561
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -2
Query: 296 SFSVFWMAVCSFSCNAVACFSTSGCALRRSSTVRSKFWRACWSTSLALPFASVNAPCRLL 117
S SV AVC + + CF T G A SS + +R ++A ++NA L
Sbjct: 65 SISVSVKAVCDVTLHKEKCFETLGSAPNASSLNPEELFRYAVKITIAEVSKAINAFSSSL 124
Query: 116 DNSETCCTMES 84
+ + TM +
Sbjct: 125 GDEKNNITMNA 135
>At3g03450.1 68416.m00343 gibberellin response modulator, putative /
gibberellin-responsive modulator, putative similar to
GAI (GI:2569938), RGA1 (GB:AAC67333) and RGA2
(GI:2339980) [Arabidopsis thaliana]; possible
involvement in nitrogen metabolism
Length = 547
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 82 SDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 216
+DS+ S+LSN ++ L++ N A L R ++R+ DLR
Sbjct: 84 NDSVHYNPSDLSNWVESMLSELNNPASSDLDTTRSCVDRSEYDLR 128
>At2g24250.1 68415.m02896 F-box family protein contains Pfam:PF00646
F-box domain
Length = 374
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 221 ALRRSSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSF 72
A+ S RS WR+ + +L S + P L++ + CCT+E P F
Sbjct: 38 AVHARSVCRS--WRSTFPFPSSLLRQSYSLPAFPLESKDLCCTLEKVPLF 85
>At1g66840.1 68414.m07597 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 607
Score = 29.1 bits (62), Expect = 1.9
Identities = 37/156 (23%), Positives = 71/156 (45%)
Frame = +1
Query: 25 NAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTV 204
N + + +S +A K+ + ++ ++N +Q T +GK KE+L + +
Sbjct: 360 NLTTSFEKLKSDREAAKKEELKLREEARIINNEIQKTETGFDGKEKELLSK--------L 411
Query: 205 EDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDD 384
++L KA ++ AL EKL+T ++ T++ + ++ N T + + +
Sbjct: 412 DELEKAK---HAESLAL-EKLETMVEKTMETREMESRR---NSTITISRFEYEYLSGK-- 462
Query: 385 FVKHAEEVQKKVHEAATKQ*RALIARRVALSLRYNS 492
HAEE +K EAA AL A A+ ++ S
Sbjct: 463 -ACHAEETAEKKVEAAMAWVEALKASTKAIMIKTES 497
>At1g64180.1 68414.m07270 intracellular protein transport protein
USO1-related similar to Rap8 (GI:2326183) [Rhynchosciara
americana]; contains weak similarity to
Swiss-Prot:P25386 intracellular protein transport
protein USO1 [Saccharomyces cerevisiae]
Length = 593
Score = 29.1 bits (62), Expect = 1.9
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +1
Query: 112 LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE-KQATALHEKLQTAIQNT 288
L SL+ L + + K++L+ +Q +R ++D K + + + T H++L +A+Q +
Sbjct: 211 LIKSLKTELAHSRARIKDLLR-CKQADKRDMDDFVKQLAEEKLSKGTKEHDRLSSAVQ-S 268
Query: 289 LKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAE 402
L++ + L K + +Q+L+ ++K+ + VK E
Sbjct: 269 LEDERKLRKRSESLYRKLAQELS-EVKSTLSNCVKEME 305
>At1g17870.1 68414.m02211 expressed protein contains 6 transmembrane
domains; similar to predicted metalloproteases
Length = 573
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/67 (22%), Positives = 35/67 (52%)
Frame = +1
Query: 16 EQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLE 195
E+F + + + E+ K K +D ++++++ SNS + N A++ L + ++ LE
Sbjct: 110 EEFKKFMGNPSIEAAIKLEKTRTDRKLKELNKESNSENPIIGIYNSLARDSLTKEKERLE 169
Query: 196 RTVEDLR 216
+ E +
Sbjct: 170 KAEETFK 176
>At5g67240.1 68418.m08475 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 745
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 22 FNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQG-ALTDANGKAKEVLQQARQNLER 198
+NA+V + E NKA ++ V++ L+ + L+ +G V + + E
Sbjct: 609 YNAVVTFNSPEEANKAFEKVKGEAVKEKGGLAQKMVAFKLSSGSGACLYVRKMVQDESEE 668
Query: 199 TVE-DLRKAHPDVEKQATALHEKLQ 270
T E + D K+ L EKL+
Sbjct: 669 TKEANANHCEDDHLKEMEELKEKLK 693
>At5g60150.1 68418.m07540 expressed protein ; expression supported
by MPSS
Length = 1195
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 37 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 192
NS+ T+ N GS+S + S + + +L + K L+QAR+N+
Sbjct: 231 NSQPTQLKNSQRSLGSESFSKNTSSTKSKTKSSLASKSSIPKPSLKQARRNV 282
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 28.7 bits (61), Expect = 2.5
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 16 EQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGAL-TDANGKAKEVLQQARQNL 192
E+ N + + E + K S S +L++ Q A + + ++ +QQ +NL
Sbjct: 342 EELNTRITTLVAEKESYIQKLDSISKDYSALKLTSETQAAADAELISRKEQEIQQLNENL 401
Query: 193 ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEV 321
+R ++D+ K+ D T +E + + L +NL E+
Sbjct: 402 DRALDDVNKS-KDKVADLTEKYEDSKRMLDIELTTVKNLRHEL 443
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = +1
Query: 82 SDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDV-EKQATALH 258
S+ ++ ++ +G L K E + + T E R ++ E+ + +
Sbjct: 375 SNQKLRVTEQVLTEKEGELKRIEAKHLEEQALLEEKIATTHETYRGLIKEISERVDSTIL 434
Query: 259 EKLQTAIQNTLKESQNLAKEV--GVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKV 420
+ Q+ + ++ ++ K V M T++K ++K D+ K EEV+KK+
Sbjct: 435 NRFQSLSEKLEEKHKSYEKTVVEATKMLLTAKKCVVEMKKEKDEMAKEKEEVEKKL 490
>At1g59540.1 68414.m06694 kinesin motor protein-related similar to
kinesin motor protein (kin2) GI:2062751 from (Ustilago
maydis)
Length = 823
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/73 (21%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 70 LKEGSDSMVQQVSELSNSLQGALTDANGKAKE--VLQQARQNLERTVEDLRKAHPDVEKQ 243
LKE DS+ +++S+ + L+ +D K+ V + R+++E ++ + A K
Sbjct: 741 LKEERDSLDRKISQSTQRLRVIASDKENALKDLNVEVKRRKDMEEEIKHISIAFATRHKS 800
Query: 244 ATALHEKLQTAIQ 282
+ H ++++ +Q
Sbjct: 801 FVSFHSEIKSKMQ 813
>At1g23080.2 68414.m02886 auxin efflux carrier protein, putative
similar to efflux carrier of polar auxin transport
[Brassica juncea] gi|12331173|emb|CAC24691
Length = 527
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 75 GRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAP 227
GRL G A + +Q S G R A SSP G + G+P P
Sbjct: 262 GRLSNFGPADMYSVQSSRGPTPRPSNFEESCAMASSPRFGYYPGGAPGSYP 312
>At1g23080.1 68414.m02885 auxin efflux carrier protein, putative
similar to efflux carrier of polar auxin transport
[Brassica juncea] gi|12331173|emb|CAC24691
Length = 619
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 75 GRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAP 227
GRL G A + +Q S G R A SSP G + G+P P
Sbjct: 262 GRLSNFGPADMYSVQSSRGPTPRPSNFEESCAMASSPRFGYYPGGAPGSYP 312
>At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 634
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/66 (24%), Positives = 25/66 (37%)
Frame = +3
Query: 180 SPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSDLTETGA 359
+P+ H R + P R RE H H + P P G R+ TE+G
Sbjct: 14 TPDRSVHHR-EVKRRPHSPVAPLRYQREEYRNHHLHGRARPVPEIGDNRESSDTRTESGH 72
Query: 360 KTESGI 377
+ + +
Sbjct: 73 RPRASV 78
>At4g04130.1 68417.m00583 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At2g11345, At3g42690
Length = 1200
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 391 KHAEEVQKKVHEAATKQ*RALIARRVALSLRYN 489
K A V K VH+ KQ LI + L+LRYN
Sbjct: 514 KAATPVGKTVHKKTAKQDATLIKQAPLLNLRYN 546
>At4g03400.1 68417.m00462 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 591
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 286 TLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVH 423
T+ +N K++ +D+ SQ L+ +A DF HA+ + + H
Sbjct: 446 TINIDKNTEKDLQRVVDKASQLLSRSTRAEVVDFTSHADVIARPGH 491
>At2g28315.1 68415.m03441 transporter-related low similarity to
SP|Q9NTN3 UDP-glucuronic acid/UDP-N-acetylgalactosamine
transporter (UDP- GlcA/UDP-GalNAc transporter) {Homo
sapiens}, SP|Q95YI5 UDP-sugar transporter UST74c (Fringe
connection protein) {Drosophila melanogaster}
Length = 240
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 231 VGVRLAEILDCALQVLASLLEHFLSFTVCVGQ 136
VGV +A I D L + S+L T CVGQ
Sbjct: 35 VGVGIASITDLQLNFVGSVLSLLAIATTCVGQ 66
>At2g02590.1 68415.m00199 expressed protein
Length = 324
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 302 WLSFSVFWMAVCSFSCNAVACFSTSGCALRRSSTVRSKFW 183
W SFS+ W A + A +S LR +ST+R W
Sbjct: 106 WASFSLLWFARSGDAKAATDSIKSSSFGLRIASTLRRFGW 145
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar to
COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 27.9 bits (59), Expect = 4.3
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 7/145 (4%)
Frame = +1
Query: 25 NAIVNSKNTESLNKALKEGSDSMVQQVSELS--NSLQGALTDANGKAKEVLQQARQNLER 198
N N+ +K + S + + S+L N+ +L N Q N +
Sbjct: 684 NTNTNTSGRGRKTSEIKLVTQSSLPKFSDLKKENTKPSSLAGRNTTTMMRTQARNGNKKT 743
Query: 199 TVEDLRKAHPDVEKQATALHEKLQTAIQ----NTLKESQNLAKEVGVNMDQTSQKLAPKL 366
T ED+ P + ++ +L + I+ TL + KE + ++ L
Sbjct: 744 TKEDIPS--PVMPRRPRSLRKSFSANIEFTELTTLYSDDMMNKERNQKQNTDIDDVSENL 801
Query: 367 K-AAYDDFVKHAEEVQKKVHEAATK 438
K A+DD AEE +K+V E K
Sbjct: 802 KNEAFDDTESEAEEEEKEVLENPVK 826
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 27.5 bits (58), Expect = 5.7
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Frame = +1
Query: 73 KEGSDSMVQQVSELSNSLQGALTDANG---KAKEVLQQARQ---NLERTVEDLRKAHPDV 234
K + M+ ++++S+ + A +A G KAKE++++A LE + LR A +
Sbjct: 382 KAALEDMMLTINQISSETEAARREAEGMRNKAKELMKEAESAHLALEDSELHLRVALDEA 441
Query: 235 EK---QATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAE 402
E+ T E++++ + T + + E G SQ+ L + F K AE
Sbjct: 442 EEAKAAETKALEQIKSMSEKTNAARNSTSSESGSQSITLSQEEFKSLSKRAEVFDKLAE 500
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 190 LERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKE 318
+++T EDLRKA+ +E+ +K + + LKES+ L KE
Sbjct: 90 VQQTQEDLRKANEQIERL-----KKDKAKALDDLKESEKLTKE 127
>At4g11080.1 68417.m01800 high mobility group (HMG1/2) family
protein similar to SP|P40618 High mobility group protein
HMG2A {Gallus gallus}; contains Pfam profile PF00505:
HMG (high mobility group) box
Length = 446
Score = 27.5 bits (58), Expect = 5.7
Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 3/125 (2%)
Frame = +1
Query: 61 NKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEK 240
NK++ E + ++ LS + K KE+ Q + +RT E+ + E+
Sbjct: 268 NKSVIEVAKMAGEEWKNLSEEKKAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKKEEE 327
Query: 241 QATALHEKLQTAIQNTLKESQNL---AKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQ 411
+ LH++ + +++ N+ KE N + K K + ++ +
Sbjct: 328 EFMKLHKQEALQLLKKKEKTDNIIKKTKETAKNKKKNENVDPNKPKKPTSSYFLFCKDAR 387
Query: 412 KKVHE 426
K V E
Sbjct: 388 KSVLE 392
>At4g01180.1 68417.m00156 XH/XS domain-containing protein contains
Pfam domain PF03469: XH domain and PF03468: XS domain
Length = 554
Score = 27.5 bits (58), Expect = 5.7
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +1
Query: 37 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 216
+ K E L+K + E ++ + + EL ++ N V +++ VE +
Sbjct: 298 HQKEKEKLHKRIME-MEAKLNETQELELEIEKLKGTTNVMKHMVGCDGDKDI---VEKIA 353
Query: 217 KAHPDVEKQATALHEKLQTAIQN---TLKESQNLAKEV 321
K +++ + TALHEK+ T + T E Q+ KE+
Sbjct: 354 KTQIELDARETALHEKMMTLARKERATNDEYQDARKEM 391
>At3g42180.1 68416.m04335 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 425
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 115 SNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEK 240
+N+LQ + + ++ + + + R NLE+ E+LRKA + +
Sbjct: 8 TNALQSSSSSSSLYSPPITVKRRSNLEKREEELRKARAAIRR 49
>At2g02630.1 68415.m00202 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 440
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 182 RACWSTSLALPFASVNAPCRLLDNSETCCTMESEP 78
+ACW TS A + +N C+ + + C +EP
Sbjct: 231 KACWRTSTAFGYRCINHNCKYM--IDIVCASTAEP 263
>At2g01820.1 68415.m00113 leucine-rich repeat protein kinase,
putative similar to protein kinase TMK1
gi|166888|gb|AAA32876; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 943
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 225 PRRRETSHRITREAAN---RHPEHTKGEPEPGEGSRRQHGSDLTETGAKTES 371
P+ R+T +T AN P T P GS+ GSD +ET K+ +
Sbjct: 429 PKFRDTVTLVTEGNANMGKNGPNKTSDAPGASPGSKPSGGSDGSETSKKSSN 480
>At1g70940.1 68414.m08184 auxin transport protein, putative (PIN3)
similar to auxin transport protein [Arabidopsis
thaliana] gi|5817301|gb|AAD52695
Length = 640
Score = 27.5 bits (58), Expect = 5.7
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = +3
Query: 75 GRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGS----PQGAPRRRET 242
GRL G A + +Q S G R A SSP G + G P P T
Sbjct: 259 GRLSNFGPADMYSVQSSRGPTPRPSNFEENCAMASSPRFGYYPGGGAGSYPAPNPEFSST 318
Query: 243 SHRITREAANRHPE 284
+ ++ N++P+
Sbjct: 319 TTSTANKSVNKNPK 332
>At1g48610.1 68414.m05437 AT hook motif-containing protein contains
Pfam profile PF02178: AT hook motif
Length = 212
Score = 27.5 bits (58), Expect = 5.7
Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 3/112 (2%)
Frame = +1
Query: 133 ALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA 312
A G+AK A T E RK + A +T + + +
Sbjct: 91 AAVKKRGRAKRSTVTAAVVTTATGEGSRKRGRPKKDDVAAATVPAETVVAPAKRRGRKPT 150
Query: 313 KEVG---VNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATKQ*RALIA 459
EV V + S +AP + A D K +QKKV EAA K +A+ A
Sbjct: 151 VEVAAQPVRRTRKSTSVAP-VAANVGDLKKRTALLQKKVKEAAAKLKQAVTA 201
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 27.5 bits (58), Expect = 5.7
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 52 ESLNKALKEGSDSMVQ--QVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAH 225
E L+K L+ +D + Q+ E +SLQ + ++ K +E+ + + + ++ V
Sbjct: 987 EELSKGLEMTNDLAAENEQLKESVSSLQNKIDESERKYEEISKISEERIKDEV------- 1039
Query: 226 PDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLK 369
P +++ A E ++ + + E+ D+TS + KLK
Sbjct: 1040 PVIDQSAIIKLETENQKLKALVSSMEEKIDELDRKHDETSPNITEKLK 1087
>At3g53040.1 68416.m05846 late embryogenesis abundant protein,
putative / LEA protein, putative similar to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 479
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 43 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA 180
++TES E DS+ Q+ E S+ GAL + G K L A
Sbjct: 363 QSTESAADKAHETKDSVAQRGEEGKGSIMGALGNMTGAIKSKLTGA 408
>At3g21260.2 68416.m02687 glycolipid transfer protein-related
contains weak similarity to Glycolipid transfer protein
(GLTP) (Swiss-Prot:P17403) [Sus scrofa]
Length = 149
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 31 IVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVED 210
+V S E L K KEGS + S + L A+ + +++ QN+E+ +E+
Sbjct: 12 LVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVKDMSQNMEQAIEE 71
>At3g21260.1 68416.m02686 glycolipid transfer protein-related
contains weak similarity to Glycolipid transfer protein
(GLTP) (Swiss-Prot:P17403) [Sus scrofa]
Length = 144
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 31 IVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVED 210
+V S E L K KEGS + S + L A+ + +++ QN+E+ +E+
Sbjct: 7 LVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVKDMSQNMEQAIEE 66
>At3g19670.1 68416.m02492 FF domain-containing protein / WW
domain-containing protein weak similarity to
huntingtin-interacting protein HYPA/FBP11 [Homo sapiens]
GI:3341980; contains Pfam profiles PF01846: FF domain,
PF00397: WW domain
Length = 960
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +1
Query: 193 ERTVEDLRKAHPDVEKQATALHE--KLQTAIQNTLKESQ-NLAKEVGVNMDQTSQKLAPK 363
E VEDL+K +++ Q + + K+ + +T E + ++++++G + +
Sbjct: 683 EDAVEDLKKRDHELKSQIKDVLKLRKVNLSAGSTFDEFKVSISEDIGFPLIPDV-----R 737
Query: 364 LKAAYDDFVKHAEEVQKKVHEAATKQ*RALI 456
LK +DD ++ A+E ++K T+Q L+
Sbjct: 738 LKLVFDDLLERAKEKEEKEARKQTRQTEKLV 768
>At3g10120.1 68416.m01214 expressed protein
Length = 173
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/57 (24%), Positives = 33/57 (57%)
Frame = +1
Query: 184 QNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKL 354
+++++T++ +R A+P+VEK+ ++L NT +++ + + V Q +KL
Sbjct: 76 KHMKKTMKKVRFANPEVEKEEQE-EDRLTDCCDNTKEKTNGVVRVKMVVSKQELEKL 131
>At2g36680.2 68415.m04500 expressed protein
Length = 168
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 193 ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKE 297
+++V++LRK D + LH Q IQN ++E
Sbjct: 64 DKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIRE 98
>At2g36680.1 68415.m04499 expressed protein
Length = 218
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 193 ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKE 297
+++V++LRK D + LH Q IQN ++E
Sbjct: 64 DKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIRE 98
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.1 bits (57), Expect = 7.5
Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Frame = +1
Query: 67 ALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERT---VEDLRKAHPDVE 237
A++ D + + + L+G + ++ K +E+ +N+E + ++ RK E
Sbjct: 709 AIRSERDKLAMEANFAREKLEGIMKESERKREEMNSVLARNIEFSQLIIDHQRKLRESSE 768
Query: 238 K--QATALHEKLQTAIQNTLKESQ---NLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAE 402
A + KL + +E + N K + SQ++ +L+A D V+ E
Sbjct: 769 SLHAAEEISRKLSMEVSVLKQEKELLSNAEKRASDEVSALSQRVY-RLQATLDT-VQSTE 826
Query: 403 EVQKKVHEAATKQ 441
EV+++ A ++
Sbjct: 827 EVREETRAAERRK 839
>At1g76500.1 68414.m08901 DNA-binding family protein contains Pfam
domain, PF02178: AT hook motif
Length = 302
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 162 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAAN 272
GS P +S G RG P G+ + + +TR++ N
Sbjct: 61 GSDPVTSGSTGKRPRGRPPGSKNKPKPPVIVTRDSPN 97
>At5g11430.1 68418.m01335 transcription elongation factor-related
contains weak similarity to transcription elongation
factors
Length = 871
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 300 PEPGEGSRRQHGSDLTETGAKT 365
P+PG GS+RQH S + G+KT
Sbjct: 688 PKPGSGSKRQH-SFSSSIGSKT 708
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +1
Query: 76 EGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATAL 255
E +D+ + ++ L+ +LT A K L N+E + + R++H K+ +L
Sbjct: 291 EDTDNKKSDNIDSNSMLENSLT-AKEKIISELNMEIHNVETALANERESHVAEIKKLNSL 349
Query: 256 HEKLQTAIQNTLKESQ 303
K T I+ KE Q
Sbjct: 350 LNKKDTIIEEMKKELQ 365
>At2g47230.1 68415.m05898 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 701
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 167 TSLALPFASVNAPCRLLDNSETCCTMESEPSFSALFK 57
T + LPFA + ++ + E C P FS LF+
Sbjct: 510 TLMILPFAKKSPFWKMYETQEVCKIAPQSPHFSPLFE 546
>At1g80400.1 68414.m09412 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q90972 RING finger
protein 13 {Gallus gallus}; contains Pfam profile:
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 407
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Frame = +3
Query: 174 TSSPELGAHSRGS-----PQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGS 338
TS+ E + SR S PQG + E + + A +HP H + SRR
Sbjct: 32 TSNDEEDSSSRSSLDELTPQGNSHQGEETVLSSSNATQQHPTHPSPPQQRPTSSRRGDNG 91
Query: 339 DLTETGAKTESGI 377
+ T + SG+
Sbjct: 92 NGRRTRSPLNSGL 104
>At1g49890.1 68414.m05593 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 659
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 263 FSCNAVACFSTSGCALR-RSSTVRSKFWRACWSTSLALPFASVNAPCR 123
FS +AV S G A R S +RS W+T+ + P ++++P R
Sbjct: 369 FSSDAVPLSSPRGMASPVRGSAIRSASPSKLWATTTSSPARALSSPSR 416
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 26.6 bits (56), Expect = 9.9
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +1
Query: 193 ERTVEDLRKAHPDVEKQATALHEK-----LQTAIQNTLKESQNLAKEVGVN--MDQTSQK 351
E VE+ VEK A+ E L+ + + L + ++ +E V+ + +T +K
Sbjct: 35 ETKVEEDESKPEGVEKSASFKEESDFFADLKESEKKALSDLKSKLEEAIVDNTLLKTKKK 94
Query: 352 LAPKLKAAYDDFVKHAEEVQKKVHEAATKQ 441
+ +K ++ VK EV+KK EAA ++
Sbjct: 95 ESSPMKEKKEEVVKPEAEVEKKKEEAAEEK 124
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.124 0.325
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,645,165
Number of Sequences: 28952
Number of extensions: 179829
Number of successful extensions: 722
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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