Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G24
         (523 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   0.82 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   4.4  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    21   7.7  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    21   7.7  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 366 RLRFWSRRIRSCFSDRT 416
           RL FW    R CF  RT
Sbjct: 367 RLAFWRLTCRKCFKSRT 383


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 131 VFHRTDFIIYS 99
           +F+ TDFIIYS
Sbjct: 337 LFYNTDFIIYS 347


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 420 YMSYR*NSCEYGETKSEGDEDDIRCSVGSLSDIY 319
           Y  YR  S E    K+E +    R  + SLS+ Y
Sbjct: 294 YRKYRETSKERSRDKTERERSKERKIISSLSNNY 327


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 420 YMSYR*NSCEYGETKSEGDEDDIRCSVGSLSDIY 319
           Y  YR  S E    K E +    R  + SLS+ Y
Sbjct: 56  YRKYRERSKERSRDKRERERSKERKIISSLSNNY 89


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 420 YMSYR*NSCEYGETKSEGDEDDIRCSVGSLSDIY 319
           Y  YR  S E    K E +    R  + SLS+ Y
Sbjct: 56  YRKYRERSKERSRDKRERERSKERKIISSLSNNY 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,977
Number of Sequences: 438
Number of extensions: 2179
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)