Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G24
(523 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19030.1 68417.m02804 major intrinsic family protein / MIP fa... 56 2e-08
At3g26520.1 68416.m03310 tonoplast intrinsic protein, putative s... 55 3e-08
At2g39010.1 68415.m04796 aquaporin, putative similar to plasma m... 52 2e-07
At3g54820.1 68416.m06068 aquaporin, putative similar to plasma m... 52 3e-07
At4g18910.1 68417.m02788 aquaglyceroporin / NOD26-like major int... 51 4e-07
At5g47450.1 68418.m05853 major intrinsic family protein / MIP fa... 51 5e-07
At2g36830.1 68415.m04516 major intrinsic family protein / MIP fa... 51 5e-07
At3g53420.1 68416.m05895 plasma membrane intrinsic protein 2A (P... 50 7e-07
At5g60660.1 68418.m07613 major intrinsic family protein / MIP fa... 50 9e-07
At4g35100.1 68417.m04986 plasma membrane intrinsic protein (SIMI... 50 9e-07
At4g17340.1 68417.m02601 major intrinsic family protein / MIP fa... 50 9e-07
At3g16240.1 68416.m02049 delta tonoplast integral protein (delta... 50 1e-06
At2g45960.1 68415.m05714 plasma membrane intrinsic protein 1B (P... 50 1e-06
At2g37180.1 68415.m04561 plasma membrane intrinsic protein 2C (P... 50 1e-06
At2g37170.1 68415.m04560 plasma membrane intrinsic protein 2B (P... 50 1e-06
At1g01620.1 68414.m00079 plasma membrane intrinsic protein 1C (P... 50 1e-06
At4g00430.2 68417.m00060 plasma membrane intrinsic protein, puta... 49 2e-06
At4g00430.1 68417.m00059 plasma membrane intrinsic protein, puta... 49 2e-06
At3g61430.1 68416.m06880 plasma membrane intrinsic protein 1A (P... 49 2e-06
At2g16850.1 68415.m01937 plasma membrane intrinsic protein, puta... 49 2e-06
At4g23400.1 68417.m03373 major intrinsic family protein / MIP fa... 49 2e-06
At4g01470.1 68417.m00190 major intrinsic family protein / MIP fa... 48 3e-06
At1g73190.1 68414.m08470 tonoplast intrinsic protein, alpha / al... 48 4e-06
At1g17810.1 68414.m02204 major intrinsic family protein / MIP fa... 47 7e-06
At2g25810.1 68415.m03097 tonoplast intrinsic protein, putative s... 46 1e-05
At1g17810.2 68414.m02205 major intrinsic family protein / MIP fa... 46 2e-05
At3g06100.1 68416.m00700 major intrinsic family protein / MIP fa... 45 3e-05
At1g80760.1 68414.m09475 major intrinsic family protein / MIP fa... 42 2e-04
At5g37810.1 68418.m04553 major intrinsic family protein / MIP fa... 40 0.001
At4g10380.1 68417.m01703 major intrinsic family protein / MIP fa... 40 0.001
At5g37820.1 68418.m04554 major intrinsic family protein / MIP fa... 39 0.002
At3g47440.1 68416.m05158 major intrinsic family protein / MIP fa... 38 0.003
At2g34390.2 68415.m04212 major intrinsic family protein / MIP fa... 38 0.005
At2g34390.1 68415.m04211 major intrinsic family protein / MIP fa... 38 0.005
At1g31885.1 68414.m03919 major intrinsic family protein / MIP fa... 36 0.022
At3g17860.2 68416.m02277 expressed protein 28 4.4
At3g17860.1 68416.m02276 expressed protein 28 4.4
At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol p... 27 5.8
At5g24640.1 68418.m02910 expressed protein similar to unknown pr... 27 7.7
>At4g19030.1 68417.m02804 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230;
identical to cDNA NLM1 protein GI:2677613
Length = 296
Score = 55.6 bits (128), Expect = 2e-08
Identities = 33/100 (33%), Positives = 43/100 (43%)
Frame = +1
Query: 223 DELAGGAASISRALLAEFIGNVLLNLFGCGACINITQGSNAAPDIXXXXXXXXXXXXXXX 402
D L + + L+AEF+G L GC + + Q N +
Sbjct: 44 DSLLSVSVPFLQKLIAEFLGTYFLVFTGCASVVVNMQNDNVVT-LPGIAIVWGLTIMVLI 102
Query: 403 XXIGHISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
+GHISG HINPAVT S GR L + YVI+Q G
Sbjct: 103 YSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIG 142
>At3g26520.1 68416.m03310 tonoplast intrinsic protein, putative
similar to tonoplast intrinsic protein GI:5081419 from
[Brassica napus]
Length = 253
Score = 55.2 bits (127), Expect = 3e-08
Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 RALLAEFIGNVLLNLFGCGACI---NITQGSNAAPDIXXXXXXXXXXXXXXXXXIG-HIS 423
RA LAEFI ++ G G+ I IT P +G +IS
Sbjct: 22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANIS 81
Query: 424 GGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
GGH+NPAVT G+L G + L R I Y IAQ G
Sbjct: 82 GGHVNPAVTFGVLLGGNITLLRGILYWIAQLLG 114
>At2g39010.1 68415.m04796 aquaporin, putative similar to plasma
membrane aquaporin 2b GI:7209560 from [Raphanus sativus]
Length = 289
Score = 52.4 bits (120), Expect = 2e-07
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = +1
Query: 247 SISRALLAEFIGNVL------LNLFGCGACINITQGSNAAPDIXXXXXXXXXXXXXXXXX 408
S RA++AEFI +L L + G + +I G A +
Sbjct: 35 SFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILV 94
Query: 409 I--GHISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
ISGGHINPAVT G+ +V L RA+ Y++AQC G
Sbjct: 95 YCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLG 134
>At3g54820.1 68416.m06068 aquaporin, putative similar to plasma
membrane aquaporin GI:3551133 from [Raphanus sativus]
Length = 286
Score = 51.6 bits (118), Expect = 3e-07
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +1
Query: 418 ISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
ISGGHINPAVT G+L +V L RA+ Y++AQC G
Sbjct: 100 ISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLG 134
>At4g18910.1 68417.m02788 aquaglyceroporin / NOD26-like major
intrinsic protein 2 (NLM2) contains Pfam profile: MIP
PF00230; similar to SP:P08995 {Glycine max} Nodulin-26
(N-26); identical to cDNA aquaglyceroporin (nlm2 gene)
GI:11071655, aquaglyceroporin [Arabidopsis thaliana]
GI:11071656
Length = 294
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/100 (33%), Positives = 41/100 (41%)
Frame = +1
Query: 223 DELAGGAASISRALLAEFIGNVLLNLFGCGACINITQGSNAAPDIXXXXXXXXXXXXXXX 402
D L + + L+AE +G L GC A TQ A +
Sbjct: 41 DSLLSISVPFLQKLMAEVLGTYFLIFAGCAAVAVNTQHDKAVT-LPGIAIVWGLTVMVLV 99
Query: 403 XXIGHISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
+GHISG H NPAVT S GR L + YVI+Q G
Sbjct: 100 YSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIG 139
>At5g47450.1 68418.m05853 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 250
Score = 50.8 bits (116), Expect = 5e-07
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Frame = +1
Query: 235 GGAASIS--RALLAEFIGNVLLNLFGCGACINITQ-GSNAAPD---IXXXXXXXXXXXXX 396
G + S+S +A L+EFI +L G G+ + + S+ A D +
Sbjct: 10 GDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFV 69
Query: 397 XXXXIGHISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
+ISGGH+NPAVT G+ G + L +Y IAQC G
Sbjct: 70 GVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLG 111
>At2g36830.1 68415.m04516 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 251
Score = 50.8 bits (116), Expect = 5e-07
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 RALLAEFIGNVLLNLFGCGACI---NITQGSNAAPDIXXXXXXXXXXXXXXXXXIG-HIS 423
+A LAEFI ++ + G G+ + +T+ P +G +IS
Sbjct: 21 KAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANIS 80
Query: 424 GGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
GGH+NPAVT G G + L R I Y IAQ G
Sbjct: 81 GGHVNPAVTFGAFIGGNITLLRGILYWIAQLLG 113
>At3g53420.1 68416.m05895 plasma membrane intrinsic protein 2A
(PIP2A) / aquaporin PIP2.1 (PIP2.1) identical to plasma
membrane intrinsic protein 2A SP: P43286 from
[Arabidopsis thaliana]
Length = 287
Score = 50.4 bits (115), Expect = 7e-07
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +1
Query: 418 ISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
ISGGHINPAVT G+ +V L RA+ Y+IAQC G
Sbjct: 101 ISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLG 135
>At5g60660.1 68418.m07613 major intrinsic family protein / MIP
family protein similar to mipC protein GI:1657948 from
[Mesembryanthemum crystallinum]
Length = 291
Score = 50.0 bits (114), Expect = 9e-07
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +1
Query: 418 ISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
ISGGHINPAVT G+ +V L R + Y++AQC G
Sbjct: 101 ISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLG 135
>At4g35100.1 68417.m04986 plasma membrane intrinsic protein (SIMIP)
nearly identical to plasma membrane intrinsic protein
[Arabidopsis thaliana] GI:2306917
Length = 280
Score = 50.0 bits (114), Expect = 9e-07
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +1
Query: 418 ISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
ISGGHINPAVT G+ +V L RA+ Y+IAQC G
Sbjct: 94 ISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLG 128
>At4g17340.1 68417.m02601 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 250
Score = 50.0 bits (114), Expect = 9e-07
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 RALLAEFIGNVLLNLFGCGACINITQ-GSNAAPD---IXXXXXXXXXXXXXXXXXIGHIS 423
+A L+EFI +L G G+ + + S+AA D + +IS
Sbjct: 19 KAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANIS 78
Query: 424 GGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
GGH+NPAVT G+ G + + +Y IAQC G
Sbjct: 79 GGHLNPAVTLGLAVGGNITVITGFFYWIAQCLG 111
>At3g16240.1 68416.m02049 delta tonoplast integral protein
(delta-TIP) identical to delta tonoplast integral
protein (delta-TIP) (GI:9279707)(GB:U39485) [Arabidopsis
thaliana] (Plant Cell 8 (4), 587-599 (1996))
Length = 250
Score = 49.6 bits (113), Expect = 1e-06
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 RALLAEFIGNVLLNLFGCGACINITQ-GSNAA---PDIXXXXXXXXXXXXXXXXXIGHIS 423
RA LAEFI +L G G+ I + S+AA P + +IS
Sbjct: 19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANIS 78
Query: 424 GGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
GGH+NPAVT G+ G++ + ++Y IAQ G
Sbjct: 79 GGHVNPAVTFGLAVGGQITVITGVFYWIAQLLG 111
>At2g45960.1 68415.m05714 plasma membrane intrinsic protein 1B
(PIP1B) / aquaporin PIP1.2 (PIP1.2) / transmembrane
protein A (TMPA) identical to plasma membrane intrinsic
protein 1B SP:Q06611 from [Arabidopsis thaliana]
Length = 286
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 247 SISRALLAEFIGNVLLNLFGCGACINITQGSN--AAPDIXXXXXXXXXXXXXXXXXIGHI 420
S RA +AEFI L + + + N A+ I I
Sbjct: 49 SFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGI 108
Query: 421 SGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
SGGHINPAVT G+ ++ L RA++Y++ QC G
Sbjct: 109 SGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLG 142
>At2g37180.1 68415.m04561 plasma membrane intrinsic protein 2C
(PIP2C) / aquaporin PIP2.3 (PIP2.3) / water-stress
induced tonoplast intrinsic protein (RD28) identical to
plasma membrane intrinsic protein 2C SP:P30302 from
[Arabidopsis thaliana]
Length = 285
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +1
Query: 418 ISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
ISGGHINPAVT G+ +V L RA+ Y++AQC G
Sbjct: 99 ISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLG 133
>At2g37170.1 68415.m04560 plasma membrane intrinsic protein 2B
(PIP2B) / aquaporin PIP2.2 (PIP2.2) identical to
SP|P43287 Plasma membrane intrinsic protein 2B
{Arabidopsis thaliana}
Length = 285
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +1
Query: 418 ISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
ISGGHINPAVT G+ +V L RA+ Y++AQC G
Sbjct: 99 ISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLG 133
>At1g01620.1 68414.m00079 plasma membrane intrinsic protein 1C
(PIP1C) / aquaporin PIP1.3 (PIP1.3) / transmembrane
protein B (TMPB) identical to plasma membrane intrinsic
protein 1c SP:Q08733 from [Arabidopsis thaliana]
Length = 286
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 247 SISRALLAEFIGNVLLNLFGCGACINITQGSN--AAPDIXXXXXXXXXXXXXXXXXIGHI 420
S RA +AEFI L + + + N A+ I I
Sbjct: 49 SFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGI 108
Query: 421 SGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
SGGHINPAVT G+ ++ L RA++Y++ QC G
Sbjct: 109 SGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLG 142
>At4g00430.2 68417.m00060 plasma membrane intrinsic protein,
putative identical to transmembrane protein GI:535780
from [Arabidopsis thaliana]; very strong similarity to
SP|Q08733 Plasma membrane intrinsic protein 1C
(Transmembrane protein B) (TMP-B) {Arabidopsis
thaliana}; contains Pfam profile PF00230: Major
intrinsic protein;
Length = 219
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 247 SISRALLAEFIGNVLLNLFGCGACINITQGSN--AAPDIXXXXXXXXXXXXXXXXXIGHI 420
S RA +AEFI L + + + N A+ I I
Sbjct: 50 SFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGI 109
Query: 421 SGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
SGGHINPAVT G+ ++ L RA++Y+I QC G
Sbjct: 110 SGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLG 143
>At4g00430.1 68417.m00059 plasma membrane intrinsic protein,
putative identical to transmembrane protein GI:535780
from [Arabidopsis thaliana]; very strong similarity to
SP|Q08733 Plasma membrane intrinsic protein 1C
(Transmembrane protein B) (TMP-B) {Arabidopsis
thaliana}; contains Pfam profile PF00230: Major
intrinsic protein;
Length = 287
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 247 SISRALLAEFIGNVLLNLFGCGACINITQGSN--AAPDIXXXXXXXXXXXXXXXXXIGHI 420
S RA +AEFI L + + + N A+ I I
Sbjct: 50 SFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGI 109
Query: 421 SGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
SGGHINPAVT G+ ++ L RA++Y+I QC G
Sbjct: 110 SGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLG 143
>At3g61430.1 68416.m06880 plasma membrane intrinsic protein 1A
(PIP1A) / aquaporin PIP1.1 (PIP1.1) (AQ1) identical to
plasma membrane intrinsic protein 1A SP:P43285 from
[Arabidopsis thaliana]
Length = 286
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 247 SISRALLAEFIGNVLLNLFGCGACINITQGSN--AAPDIXXXXXXXXXXXXXXXXXIGHI 420
S RA +AEFI L + + + N A+ I I
Sbjct: 49 SFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGI 108
Query: 421 SGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
SGGHINPAVT G+ ++ L RA++Y++ QC G
Sbjct: 109 SGGHINPAVTFGLFLARKLSLTRALYYIVMQCLG 142
>At2g16850.1 68415.m01937 plasma membrane intrinsic protein,
putative very strong similarity to plasma membrane
intrinsic protein (SIMIP) [Arabidopsis thaliana]
GI:2306917
Length = 278
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +1
Query: 418 ISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
ISGGHINPAVT G+ +V L RA+ Y++AQC G
Sbjct: 92 ISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLG 126
>At4g23400.1 68417.m03373 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 287
Score = 48.8 bits (111), Expect = 2e-06
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 247 SISRALLAEFIGNVLLNLFGCGACINITQGSN--AAPDIXXXXXXXXXXXXXXXXXIGHI 420
S RA +AEFI L + + + N A+ I I
Sbjct: 50 SFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGI 109
Query: 421 SGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
SGGHINPAVT G+ ++ L RA++Y++ QC G
Sbjct: 110 SGGHINPAVTFGLFLARKLSLTRALFYIVMQCLG 143
>At4g01470.1 68417.m00190 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 252
Score = 48.4 bits (110), Expect = 3e-06
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 RALLAEFIGNVLLNLFGCGACI---NITQGSNAAPDIXXXXXXXXXXXXXXXXXIG-HIS 423
RA AEF V+ G G+ + +T A P +G ++S
Sbjct: 21 RAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVS 80
Query: 424 GGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
GGH+NPAVT G G + L RAI Y IAQ G
Sbjct: 81 GGHVNPAVTFGAFIGGNITLLRAILYWIAQLLG 113
>At1g73190.1 68414.m08470 tonoplast intrinsic protein, alpha /
alpha-TIP (TIP3.1) identical to SP|P26587 Tonoplast
intrinsic protein, alpha (Alpha TIP) [Arabidopsis
thaliana] (Plant Physiol. 99, 561-570 (1992))
Length = 268
Score = 48.0 bits (109), Expect = 4e-06
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Frame = +1
Query: 256 RALLAEFIGNVLLNLFGCGACINITQ---------GSNAAPDIXXXXXXXXXXXXXXXXX 408
RA LAEF+ + G+ +++ + G+N +
Sbjct: 24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSA 83
Query: 409 IGHISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
++SGGH+NPAVT G L GRV RAI+Y IAQ G
Sbjct: 84 AINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLG 121
>At1g17810.1 68414.m02204 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 267
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Frame = +1
Query: 256 RALLAEFIGNVLLNLFGCGACINITQ---------GSNAAPDIXXXXXXXXXXXXXXXXX 408
RA LAEF+ + G G+ + + + G+N +
Sbjct: 24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSA 83
Query: 409 IGHISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
++SGGH+NPAVT L GR+ + RAI+Y +AQ G
Sbjct: 84 AINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIG 121
>At2g25810.1 68415.m03097 tonoplast intrinsic protein, putative
similar to tonoplast intrinsic protein GI:4584429 from
[Nicotiana tabacum]
Length = 249
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/86 (32%), Positives = 36/86 (41%)
Frame = +1
Query: 256 RALLAEFIGNVLLNLFGCGACINITQGSNAAPDIXXXXXXXXXXXXXXXXXIGHISGGHI 435
+AL+ EFI L G G+ + GHISGGH+
Sbjct: 19 KALIVEFITTFLFVFAGVGSAMATDSLVGNTLVGLFAVAVAHAFVVAVMISAGHISGGHL 78
Query: 436 NPAVTAGMLSTGRVKLARAIWYVIAQ 513
NPAVT G+L G + + RA Y I Q
Sbjct: 79 NPAVTLGLLLGGHISVFRAFLYWIDQ 104
>At1g17810.2 68414.m02205 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 225
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 415 HISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
++SGGH+NPAVT L GR+ + RAI+Y +AQ G
Sbjct: 44 NVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIG 79
>At3g06100.1 68416.m00700 major intrinsic family protein / MIP
family protein contains Pfam profile: PF00230 major
intrinsic protein; contains non-consensus TT acceptor
splice site at exon 4
Length = 275
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +1
Query: 256 RALLAEFIGNVLLNLFGCGACINITQGSNAAPDIXXXXXXXXXXXXXXXXXIGHISGGHI 435
R ++AE +G +L CG I+ TQ S + IGHISG H+
Sbjct: 46 RIVMAELVGTFILMFSVCGV-ISSTQLSGGHVGLLEYAVTAGLSVVVVVYSIGHISGAHL 104
Query: 436 NPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
NP++T G ++ Y+ AQ G
Sbjct: 105 NPSITIAFAVFGGFPWSQVPLYITAQTLG 133
>At1g80760.1 68414.m09475 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 305
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 247 SISRALLAEFIGNVLLNLFGCGACINITQGSNAAPDIXXXXXXXXXXXXXXXXXIGHISG 426
S+ R L AEF+G ++L G I + Q ++ A + GHISG
Sbjct: 77 SLYRKLGAEFVGTLILIFAGTATAI-VNQKTDGAETLIGCAASAGLAVMIVILSTGHISG 135
Query: 427 GHINPAVT 450
H+NPAVT
Sbjct: 136 AHLNPAVT 143
>At5g37810.1 68418.m04553 major intrinsic family protein / MIP
family protein similar to pollen-specific membrane
integral protein SP:P49173 from [Nicotiana alata];
contains Pfam profile: MIP PF00230
Length = 283
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +1
Query: 250 ISRALLAEFIGNVLLNLFGCGACI-NITQGSNAA-PDIXXXXXXXXXXXXXXXXXIGHIS 423
+++ L+AE IG + GCG + N+ G P I GHIS
Sbjct: 41 LTQKLIAEMIGTYFIVFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYST---GHIS 97
Query: 424 GGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
G H NPAVT R + Y+ AQ AG
Sbjct: 98 GAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAG 130
>At4g10380.1 68417.m01703 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 304
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = +1
Query: 247 SISRALLAEFIGNVLLNLFGCGACINITQGSNAAPDIXXXXXXXXXXXXXXXXXIGHISG 426
S++R L AEF+G +L +F A + Q + A + GHISG
Sbjct: 75 SLTRKLGAEFVGTFIL-IFTATAGPIVNQKYDGAETLIGNAACAGLAVMIIILSTGHISG 133
Query: 427 GHINPAVTAGMLSTGRVKLARAIWYVIAQ 513
H+NP++T + A Y+ AQ
Sbjct: 134 AHLNPSLTIAFAALRHFPWAHVPAYIAAQ 162
>At5g37820.1 68418.m04554 major intrinsic family protein / MIP
family protein contains Pfam profile: PF00230 major
intrinsic protein (MIP)
Length = 283
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +1
Query: 250 ISRALLAEFIGNVLLNLFGCGACI-NITQGSNAA-PDIXXXXXXXXXXXXXXXXXIGHIS 423
+++ L+AE IG + GCG + N+ G P I GHIS
Sbjct: 41 LTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYST---GHIS 97
Query: 424 GGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
G H NPAVT R + Y+ AQ G
Sbjct: 98 GAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTG 130
>At3g47440.1 68416.m05158 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 256
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 415 HISGGHINPAVTAGMLSTGRVKLARAIWYVIAQ 513
++SGGH+NPAVT M GR+ + A++Y +Q
Sbjct: 80 NVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQ 112
>At2g34390.2 68415.m04212 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230; an
isoform contains a non-consensus GA-AG intron
Length = 288
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/87 (29%), Positives = 35/87 (40%)
Frame = +1
Query: 262 LLAEFIGNVLLNLFGCGACINITQGSNAAPDIXXXXXXXXXXXXXXXXXIGHISGGHINP 441
LLAE +G L GC A I + N + +GH+S H NP
Sbjct: 50 LLAELVGTYYLIFAGCAA-IAVNAQHNHVVTLVGIAVVWGIVIMVLVYCLGHLSA-HFNP 107
Query: 442 AVTAGMLSTGRVKLARAIWYVIAQCAG 522
AVT + S+ R L + Y+ Q G
Sbjct: 108 AVTLALASSQRFPLNQVPAYITVQVIG 134
>At2g34390.1 68415.m04211 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230; an
isoform contains a non-consensus GA-AG intron
Length = 288
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/87 (29%), Positives = 35/87 (40%)
Frame = +1
Query: 262 LLAEFIGNVLLNLFGCGACINITQGSNAAPDIXXXXXXXXXXXXXXXXXIGHISGGHINP 441
LLAE +G L GC A I + N + +GH+S H NP
Sbjct: 50 LLAELVGTYYLIFAGCAA-IAVNAQHNHVVTLVGIAVVWGIVIMVLVYCLGHLSA-HFNP 107
Query: 442 AVTAGMLSTGRVKLARAIWYVIAQCAG 522
AVT + S+ R L + Y+ Q G
Sbjct: 108 AVTLALASSQRFPLNQVPAYITVQVIG 134
>At1g31885.1 68414.m03919 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 269
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 409 IGHISGGHINPAVTAGMLSTGRVKLARAIWYVIAQCAG 522
IGH+SG H NPAV+ S+ + + Y+ AQ G
Sbjct: 39 IGHVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLG 76
>At3g17860.2 68416.m02277 expressed protein
Length = 339
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 282 PYKFSKKSSADTRCTSSQFVQSELSS 205
PY KKSS D R + S+ + S LSS
Sbjct: 312 PYCLDKKSSTDCRRSMSECISSSLSS 337
>At3g17860.1 68416.m02276 expressed protein
Length = 352
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 282 PYKFSKKSSADTRCTSSQFVQSELSS 205
PY KKSS D R + S+ + S LSS
Sbjct: 325 PYCLDKKSSTDCRRSMSECISSSLSS 350
>At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol
protease, putative contains similarity to cysteine
proteinase RD21A (thiol protease) GI:435619, SP:P43297
from [Arabidopsis thaliana]
Length = 452
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -3
Query: 470 PVESMPAVTAGFICPPDICPIAETAANTARPKAKAMRTISGAALDP 333
P ES G C P P+ + ANT R K + +I P
Sbjct: 392 PYESATCCDDGSSCCPQSYPVCDLKANTCRMKGNSPLSIKALTRGP 437
>At5g24640.1 68418.m02910 expressed protein similar to unknown
protein (gb|AAC02775.1)
Length = 118
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 421 SGGHINPAVTAGMLSTGRVKLARAIWY 501
S H++PA+ +G S GR KL W+
Sbjct: 61 SNCHVSPAIKSGHKSKGRRKLQPTSWW 87
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,568,699
Number of Sequences: 28952
Number of extensions: 171978
Number of successful extensions: 434
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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