Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G23
         (410 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.    224   4e-59
AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p pro...   224   4e-59
AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA...   224   4e-59
AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p pro...   219   1e-57
AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA...   219   1e-57
AY075413-1|AAL68236.1|  218|Drosophila melanogaster LD35371p pro...    44   1e-04
AE014134-1862|AAF52933.1|  218|Drosophila melanogaster CG5108-PA...    44   1e-04
L42512-1|AAC41608.1| 1212|Drosophila melanogaster shortsighted c...    29   3.2  
AE014134-2346|AAF53298.1| 1906|Drosophila melanogaster CG7099-PA...    29   3.2  
AE014134-2212|ABI31313.1| 1097|Drosophila melanogaster CG5461-PF...    29   3.2  
AE014134-2211|AAF53201.2| 1206|Drosophila melanogaster CG5461-PA...    29   3.2  
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei...    28   4.2  
AE014134-770|AAF50983.2|  450|Drosophila melanogaster CG15630-PA...    27   7.3  

>U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.
          Length = 228

 Score =  224 bits (547), Expect = 4e-59
 Identities = 108/112 (96%), Positives = 112/112 (100%)
 Frame = -1

Query: 410 VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 231
           VKH+FEIIHLLTGENPLQ+LV+AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW
Sbjct: 117 VKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 176

Query: 230 LLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 75
           LLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 177 LLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228


>AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p
           protein.
          Length = 228

 Score =  224 bits (547), Expect = 4e-59
 Identities = 108/112 (96%), Positives = 112/112 (100%)
 Frame = -1

Query: 410 VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 231
           VKH+FEIIHLLTGENPLQ+LV+AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW
Sbjct: 117 VKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 176

Query: 230 LLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 75
           LLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 177 LLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228


>AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA
           protein.
          Length = 228

 Score =  224 bits (547), Expect = 4e-59
 Identities = 108/112 (96%), Positives = 112/112 (100%)
 Frame = -1

Query: 410 VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 231
           VKH+FEIIHLLTGENPLQ+LV+AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW
Sbjct: 117 VKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 176

Query: 230 LLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 75
           LLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 177 LLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228


>AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p
           protein.
          Length = 230

 Score =  219 bits (535), Expect = 1e-57
 Identities = 105/112 (93%), Positives = 109/112 (97%)
 Frame = -1

Query: 410 VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 231
           VKHAFEIIHLLT ENPLQV V AI+NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW
Sbjct: 119 VKHAFEIIHLLTSENPLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 178

Query: 230 LLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 75
           L+CTGAREAAFRNIKT+AEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 179 LICTGAREAAFRNIKTVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 230


>AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA
           protein.
          Length = 230

 Score =  219 bits (535), Expect = 1e-57
 Identities = 105/112 (93%), Positives = 109/112 (97%)
 Frame = -1

Query: 410 VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 231
           VKHAFEIIHLLT ENPLQV V AI+NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW
Sbjct: 119 VKHAFEIIHLLTSENPLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 178

Query: 230 LLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 75
           L+CTGAREAAFRNIKT+AEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 179 LICTGAREAAFRNIKTVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 230


>AY075413-1|AAL68236.1|  218|Drosophila melanogaster LD35371p
           protein.
          Length = 218

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 33/98 (33%), Positives = 50/98 (51%)
 Frame = -1

Query: 368 NPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI 189
           NP  +L  A+ N  P    T I R G   +  V ++  R    A+  L   ARE   R +
Sbjct: 117 NPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTKRSYFLAMKWLLEAAREKE-RKV 175

Query: 188 KTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 75
            ++ E +A E+++AA G      IK+KD+L R+ +SNR
Sbjct: 176 -SLPEKLAWEILDAAHGQGR--VIKRKDDLHRLCESNR 210


>AE014134-1862|AAF52933.1|  218|Drosophila melanogaster CG5108-PA
           protein.
          Length = 218

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 33/98 (33%), Positives = 50/98 (51%)
 Frame = -1

Query: 368 NPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI 189
           NP  +L  A+ N  P    T I R G   +  V ++  R    A+  L   ARE   R +
Sbjct: 117 NPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTKRSYFLAMKWLLEAAREKE-RKV 175

Query: 188 KTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 75
            ++ E +A E+++AA G      IK+KD+L R+ +SNR
Sbjct: 176 -SLPEKLAWEILDAAHGQGR--VIKRKDDLHRLCESNR 210


>L42512-1|AAC41608.1| 1212|Drosophila melanogaster shortsighted
           class 2 protein.
          Length = 1212

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 197 RNIKTIAECVADELINAAKGSSNSYAIKKKDEL-ERVAKSNR*KYFKIGS 51
           + I+ +   V+D +IN   G+      KKKD++ E   +S R K  KI S
Sbjct: 466 QTIQNVQVNVSDNIINVVSGAVTPGGTKKKDDIKETQHRSERFKVVKIES 515


>AE014134-2346|AAF53298.1| 1906|Drosophila melanogaster CG7099-PA
            protein.
          Length = 1906

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = +1

Query: 238  AWLTRRNGDTSTA*R----RTVPARPILVESSLGPELIIAVTR 354
            +W+ R+NG  S A R    RTV  R ++    +GP L +   R
Sbjct: 931  SWVQRQNGGKSNAAREKAKRTVRKRAVITRLKIGPRLAVRKAR 973


>AE014134-2212|ABI31313.1| 1097|Drosophila melanogaster CG5461-PF,
           isoform F protein.
          Length = 1097

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 197 RNIKTIAECVADELINAAKGSSNSYAIKKKDEL-ERVAKSNR*KYFKIGS 51
           + I+ +   V+D +IN   G+      KKKD++ E   +S R K  KI S
Sbjct: 358 QTIQNVQVNVSDNIINVVSGAVTPGGTKKKDDIKETQHRSERFKVVKIES 407


>AE014134-2211|AAF53201.2| 1206|Drosophila melanogaster CG5461-PA,
           isoform A protein.
          Length = 1206

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 197 RNIKTIAECVADELINAAKGSSNSYAIKKKDEL-ERVAKSNR*KYFKIGS 51
           + I+ +   V+D +IN   G+      KKKD++ E   +S R K  KI S
Sbjct: 467 QTIQNVQVNVSDNIINVVSGAVTPGGTKKKDDIKETQHRSERFKVVKIES 516


>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
           protein.
          Length = 4167

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 100 SSSFFLMAYELDEPLAALISSSATHSAIVLMFLNAASRAPVHNNQIAWLTRR 255
           SS++   + E+D  +  L+  S  H + V  + + A    VH +++ WL  R
Sbjct: 244 SSAWVFFSNEIDSSVHMLMDRSKMHESWVPYYASRALGYRVHLDRLVWLCNR 295


>AE014134-770|AAF50983.2|  450|Drosophila melanogaster CG15630-PA
           protein.
          Length = 450

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 258 WGHIDGL-TSNCTSTTDPGGVFSWTRINNSSHQNLQRVFTRQ 380
           + +I+G  T  C +  +P   F+W R +N  H N  R++T Q
Sbjct: 228 YAYINGTATLMCEALAEPPANFTWYRKHNKLHSN-NRLYTIQ 268


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,353,696
Number of Sequences: 53049
Number of extensions: 353789
Number of successful extensions: 895
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)