Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G23
         (410 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   9.5  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    20   9.5  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 410 VKHAFEIIHLLTGENPLQVLVTAII 336
           ++HAFEI  +L    P+ +++   I
Sbjct: 218 IEHAFEISTMLFFVLPMTIIIVLYI 242


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 278 DVELYQHDRSWWSLLL 325
           DV+      SWW+L+L
Sbjct: 178 DVDEKTDANSWWALIL 193


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/24 (25%), Positives = 13/24 (54%)
 Frame = +3

Query: 336 NNSSHQNLQRVFTRQQVNNFKGMF 407
           NN+++ N    +     NN+K ++
Sbjct: 330 NNNNYNNNYNNYNNNNYNNYKKLY 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,832
Number of Sequences: 438
Number of extensions: 1946
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)