Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G22
         (563 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC096756-1|AAH96756.1|  194|Homo sapiens ribosomal protein S9 pr...   159   6e-39
BC071940-1|AAH71940.1|  194|Homo sapiens ribosomal protein S9 pr...   159   6e-39
BC068055-1|AAH68055.1|  194|Homo sapiens ribosomal protein S9 pr...   159   6e-39
BC007857-1|AAH07857.1|  194|Homo sapiens ribosomal protein S9 pr...   159   6e-39
BC007434-1|AAH07434.1|  194|Homo sapiens ribosomal protein S9 pr...   159   6e-39
BC007410-1|AAH07410.1|  194|Homo sapiens ribosomal protein S9 pr...   159   6e-39
BC000802-1|AAH00802.1|  194|Homo sapiens ribosomal protein S9 pr...   159   6e-39
AB061839-1|BAB79477.1|  194|Homo sapiens ribosomal protein S9 pr...   159   6e-39
AL080243-1|CAB62915.1|  194|Homo sapiens protein ( Human DNA seq...   155   8e-38
U14971-1|AAA85659.1|  194|Homo sapiens ribosomal protein S9 prot...   153   3e-37
BC141920-1|AAI41921.1|  113|Homo sapiens RPS9 protein protein.        146   5e-35
AB007150-1|BAA25816.1|   64|Homo sapiens ribosomal protein S9 pr...   126   5e-29
BC011745-1|AAH11745.1|  184|Homo sapiens IMP3, U3 small nucleola...    36   0.13 
BC006487-1|AAH06487.1|  184|Homo sapiens IMP3, U3 small nucleola...    36   0.13 
AY050497-1|AAL06639.1|  184|Homo sapiens BRMS2 protein.                36   0.13 
AK223121-1|BAD96841.1|  184|Homo sapiens U3 snoRNP protein 3 hom...    36   0.13 
AK001830-1|BAA91929.1|  184|Homo sapiens protein ( Homo sapiens ...    36   0.13 
BC101517-1|AAI01518.1|  637|Homo sapiens RAB11 family interactin...    29   8.5  
BC093914-1|AAH93914.1|  637|Homo sapiens RAB11 family interactin...    29   8.5  
AY169244-1|AAO21970.1|  637|Homo sapiens rab11-family interactin...    29   8.5  
AL831830-1|CAD38543.1|  296|Homo sapiens hypothetical protein pr...    29   8.5  
AK097424-1|BAC05045.1|  535|Homo sapiens protein ( Homo sapiens ...    29   8.5  
AJ314646-1|CAC44535.1|  609|Homo sapiens hypothetical protein pr...    29   8.5  
AB058724-1|BAB47450.1|  609|Homo sapiens KIAA1821 protein protein.     29   8.5  

>BC096756-1|AAH96756.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  159 bits (386), Expect = 6e-39
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFI
Sbjct: 89  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFI 148

Query: 485 VRLDSGKHIDFSLKSPFGGGRPGRVK 562
           VRLDS KHIDFSL+SP+GGGRPGRVK
Sbjct: 149 VRLDSQKHIDFSLRSPYGGGRPGRVK 174



 Score =  133 bits (321), Expect = 5e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +3

Query: 60  VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 239
           V  KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 240 PKRLFEGNA 266
           P+RLFEGNA
Sbjct: 68  PRRLFEGNA 76


>BC071940-1|AAH71940.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  159 bits (386), Expect = 6e-39
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFI
Sbjct: 89  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFI 148

Query: 485 VRLDSGKHIDFSLKSPFGGGRPGRVK 562
           VRLDS KHIDFSL+SP+GGGRPGRVK
Sbjct: 149 VRLDSQKHIDFSLRSPYGGGRPGRVK 174



 Score =  133 bits (321), Expect = 5e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +3

Query: 60  VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 239
           V  KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 240 PKRLFEGNA 266
           P+RLFEGNA
Sbjct: 68  PRRLFEGNA 76


>BC068055-1|AAH68055.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  159 bits (386), Expect = 6e-39
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFI
Sbjct: 89  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFI 148

Query: 485 VRLDSGKHIDFSLKSPFGGGRPGRVK 562
           VRLDS KHIDFSL+SP+GGGRPGRVK
Sbjct: 149 VRLDSQKHIDFSLRSPYGGGRPGRVK 174



 Score =  133 bits (321), Expect = 5e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +3

Query: 60  VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 239
           V  KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 240 PKRLFEGNA 266
           P+RLFEGNA
Sbjct: 68  PRRLFEGNA 76


>BC007857-1|AAH07857.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  159 bits (386), Expect = 6e-39
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFI
Sbjct: 89  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFI 148

Query: 485 VRLDSGKHIDFSLKSPFGGGRPGRVK 562
           VRLDS KHIDFSL+SP+GGGRPGRVK
Sbjct: 149 VRLDSQKHIDFSLRSPYGGGRPGRVK 174



 Score =  133 bits (321), Expect = 5e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +3

Query: 60  VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 239
           V  KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 240 PKRLFEGNA 266
           P+RLFEGNA
Sbjct: 68  PRRLFEGNA 76


>BC007434-1|AAH07434.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  159 bits (386), Expect = 6e-39
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFI
Sbjct: 89  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFI 148

Query: 485 VRLDSGKHIDFSLKSPFGGGRPGRVK 562
           VRLDS KHIDFSL+SP+GGGRPGRVK
Sbjct: 149 VRLDSQKHIDFSLRSPYGGGRPGRVK 174



 Score =  133 bits (321), Expect = 5e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +3

Query: 60  VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 239
           V  KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 240 PKRLFEGNA 266
           P+RLFEGNA
Sbjct: 68  PRRLFEGNA 76


>BC007410-1|AAH07410.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  159 bits (386), Expect = 6e-39
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFI
Sbjct: 89  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFI 148

Query: 485 VRLDSGKHIDFSLKSPFGGGRPGRVK 562
           VRLDS KHIDFSL+SP+GGGRPGRVK
Sbjct: 149 VRLDSQKHIDFSLRSPYGGGRPGRVK 174



 Score =  133 bits (321), Expect = 5e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +3

Query: 60  VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 239
           V  KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 240 PKRLFEGNA 266
           P+RLFEGNA
Sbjct: 68  PRRLFEGNA 76


>BC000802-1|AAH00802.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  159 bits (386), Expect = 6e-39
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFI
Sbjct: 89  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFI 148

Query: 485 VRLDSGKHIDFSLKSPFGGGRPGRVK 562
           VRLDS KHIDFSL+SP+GGGRPGRVK
Sbjct: 149 VRLDSQKHIDFSLRSPYGGGRPGRVK 174



 Score =  133 bits (321), Expect = 5e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +3

Query: 60  VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 239
           V  KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 240 PKRLFEGNA 266
           P+RLFEGNA
Sbjct: 68  PRRLFEGNA 76


>AB061839-1|BAB79477.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  159 bits (386), Expect = 6e-39
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFI
Sbjct: 89  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFI 148

Query: 485 VRLDSGKHIDFSLKSPFGGGRPGRVK 562
           VRLDS KHIDFSL+SP+GGGRPGRVK
Sbjct: 149 VRLDSQKHIDFSLRSPYGGGRPGRVK 174



 Score =  133 bits (321), Expect = 5e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +3

Query: 60  VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 239
           V  KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 240 PKRLFEGNA 266
           P+RLFEGNA
Sbjct: 68  PRRLFEGNA 76


>AL080243-1|CAB62915.1|  194|Homo sapiens protein ( Human DNA
           sequence from clone RP11-12M9 on chromosome 22. ).
          Length = 194

 Score =  155 bits (377), Expect = 8e-38
 Identities = 74/86 (86%), Positives = 78/86 (90%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRH RVRKQVVNIPSFI
Sbjct: 89  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFI 148

Query: 485 VRLDSGKHIDFSLKSPFGGGRPGRVK 562
           VRLDS KHIDFSL SP+GGGRPGRVK
Sbjct: 149 VRLDSQKHIDFSLCSPYGGGRPGRVK 174



 Score =  125 bits (302), Expect = 9e-29
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = +3

Query: 60  VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 239
           V  KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8   VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67

Query: 240 PKRLFEGNA 266
           P+RLFEGNA
Sbjct: 68  PRRLFEGNA 76


>U14971-1|AAA85659.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  153 bits (372), Expect = 3e-37
 Identities = 74/86 (86%), Positives = 78/86 (90%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFI
Sbjct: 89  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFI 148

Query: 485 VRLDSGKHIDFSLKSPFGGGRPGRVK 562
           VRLDS KHIDFSL+SP G GRPGRVK
Sbjct: 149 VRLDSQKHIDFSLRSPTGVGRPGRVK 174



 Score =  133 bits (321), Expect = 5e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +3

Query: 60  VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 239
           V  KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 240 PKRLFEGNA 266
           P+RLFEGNA
Sbjct: 68  PRRLFEGNA 76


>BC141920-1|AAI41921.1|  113|Homo sapiens RPS9 protein protein.
          Length = 113

 Score =  146 bits (354), Expect = 5e-35
 Identities = 69/80 (86%), Positives = 74/80 (92%)
 Frame = +2

Query: 305 ENR*NWDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 484
           E +   DY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFI
Sbjct: 28  EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFI 87

Query: 485 VRLDSGKHIDFSLKSPFGGG 544
           VRLDS KHIDFSL+SP+GGG
Sbjct: 88  VRLDSQKHIDFSLRSPYGGG 107


>AB007150-1|BAA25816.1|   64|Homo sapiens ribosomal protein S9
           protein.
          Length = 64

 Score =  126 bits (304), Expect = 5e-29
 Identities = 57/63 (90%), Positives = 63/63 (100%)
 Frame = +3

Query: 69  KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 248
           KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2   KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61

Query: 249 LFE 257
           LFE
Sbjct: 62  LFE 64


>BC011745-1|AAH11745.1|  184|Homo sapiens IMP3, U3 small nucleolar
           ribonucleoprotein, homolog (yeast) protein.
          Length = 184

 Score = 35.5 bits (78), Expect = 0.13
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 353 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 487
           F  RRL T + K  +A+ +  A   + Q H+RV   VV  P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150


>BC006487-1|AAH06487.1|  184|Homo sapiens IMP3, U3 small nucleolar
           ribonucleoprotein, homolog (yeast) protein.
          Length = 184

 Score = 35.5 bits (78), Expect = 0.13
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 353 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 487
           F  RRL T + K  +A+ +  A   + Q H+RV   VV  P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150


>AY050497-1|AAL06639.1|  184|Homo sapiens BRMS2 protein.
          Length = 184

 Score = 35.5 bits (78), Expect = 0.13
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 353 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 487
           F  RRL T + K  +A+ +  A   + Q H+RV   VV  P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150


>AK223121-1|BAD96841.1|  184|Homo sapiens U3 snoRNP protein 3
           homolog protein.
          Length = 184

 Score = 35.5 bits (78), Expect = 0.13
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 353 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 487
           F  RRL T + K  +A+ +  A   + Q H+RV   VV  P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150


>AK001830-1|BAA91929.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10968 fis, clone PLACE1000863, moderately
           similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
           YHR148W. ).
          Length = 184

 Score = 35.5 bits (78), Expect = 0.13
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 353 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 487
           F  RRL T + K  +A+ +  A   + Q H+RV   VV  P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150


>BC101517-1|AAI01518.1|  637|Homo sapiens RAB11 family interacting
           protein 4 (class II) protein.
          Length = 637

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 487 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEVL 347
           D+ER+ +   L DT++ L D+      MMD LR+  LE    + A QE++
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELI 500


>BC093914-1|AAH93914.1|  637|Homo sapiens RAB11 family interacting
           protein 4 (class II) protein.
          Length = 637

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 487 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEVL 347
           D+ER+ +   L DT++ L D+      MMD LR+  LE    + A QE++
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELI 500


>AY169244-1|AAO21970.1|  637|Homo sapiens rab11-family interacting
           protein 4 protein.
          Length = 637

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 487 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEVL 347
           D+ER+ +   L DT++ L D+      MMD LR+  LE    + A QE++
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELI 500


>AL831830-1|CAD38543.1|  296|Homo sapiens hypothetical protein
           protein.
          Length = 296

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 487 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEVL 347
           D+ER+ +   L DT++ L D+      MMD LR+  LE    + A QE++
Sbjct: 110 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELI 159


>AK097424-1|BAC05045.1|  535|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40105 fis, clone TESTI2006383. ).
          Length = 535

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 487 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEVL 347
           D+ER+ +   L DT++ L D+      MMD LR+  LE    + A QE++
Sbjct: 349 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELI 398


>AJ314646-1|CAC44535.1|  609|Homo sapiens hypothetical protein
           protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 487 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEVL 347
           D+ER+ +   L DT++ L D+      MMD LR+  LE    + A QE++
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELI 472


>AB058724-1|BAB47450.1|  609|Homo sapiens KIAA1821 protein protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 487 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEVL 347
           D+ER+ +   L DT++ L D+      MMD LR+  LE    + A QE++
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELI 472


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,514,834
Number of Sequences: 237096
Number of extensions: 1788021
Number of successful extensions: 4564
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4564
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)