Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G21
         (487 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3970|AAM70795.2|  126|Drosophila melanogaster CG30423-P...    64   1e-10
BT001754-1|AAN71509.1|  126|Drosophila melanogaster RH04491p pro...    61   7e-10

>AE013599-3970|AAM70795.2|  126|Drosophila melanogaster CG30423-PB
           protein.
          Length = 126

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = +1

Query: 301 GLVSLAFAGSIGMTFVILACALPQYKTWWPFFVVLFYVLCPIATMIARRHTDGTAGN 471
           GL   AF   IG+TF+ILACA+P  K ++PFFV+LFYVL  +   IARR T G   N
Sbjct: 6   GLFICAFLTCIGVTFLILACAVPTTKIFYPFFVLLFYVLSVLPVFIARRTTPGNETN 62


>BT001754-1|AAN71509.1|  126|Drosophila melanogaster RH04491p
           protein.
          Length = 126

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 316 AFAGSIGMTFVILACALPQYKTWWPFFVVLFYVLCPIATMIARRHTDGTAGN 471
           AF   IG+TF+ILACA+P  K ++PFFV+LFYVL  +   IARR T G   N
Sbjct: 11  AFLTCIGVTFLILACAVPTTKIFYPFFVLLFYVLSVLPVFIARRTTPGNETN 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,108,483
Number of Sequences: 53049
Number of extensions: 495689
Number of successful extensions: 1375
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)