Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G21
(487 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 24 0.75
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 0.75
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 0.75
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.3
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 3.0
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 4.0
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 4.0
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 5.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 5.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 5.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 5.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 7.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.2
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 9.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 24.2 bits (50), Expect = 0.75
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 203 VTLDAPKCIIISYL*VCLFYIP 268
V L P C+ ISYL V FY+P
Sbjct: 240 VNLIVP-CVSISYLSVLAFYLP 260
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 0.75
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +3
Query: 222 NVLLFLIYKYVFFIF----HVSSHLCGHMNRSSVSGFCWFNWY 338
N++ F+ KY+ + + HV LCG + + G+ + W+
Sbjct: 510 NIIKFVPVKYLTYEYPWWSHVLGWLCGLSSMLCIPGYMIYIWF 552
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.2 bits (50), Expect = 0.75
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +3
Query: 222 NVLLFLIYKYVFFIF----HVSSHLCGHMNRSSVSGFCWFNWY 338
N++ F+ KY+ + + HV LCG + + G+ + W+
Sbjct: 563 NIIKFVPVKYLTYEYPWWSHVLGWLCGLSSMLCIPGYMIYIWF 605
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNIDILNR 176
NNN + K YYNI+ + +
Sbjct: 99 NNNNYNNYKKLYYNINYIEQ 118
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNIDILNR 176
NNN + K YYNI+ + +
Sbjct: 99 NNNNYNNYKKLYYNINYIEQ 118
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNIDILNR 176
NNN + K YYNI+ + +
Sbjct: 99 NNNNYNNYKKLYYNINYIEQ 118
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNIDILNR 176
NNN + K YYNI+ + +
Sbjct: 99 NNNNYNNYKKLYYNINYIEQ 118
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNIDILNR 176
NNN + K YYNI+ + +
Sbjct: 99 NNNNYNNYKKLYYNINYIEQ 118
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNIDILNR 176
NNN + K YYNI+ + +
Sbjct: 99 NNNNYNNYKKLYYNINYIEQ 118
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNIDILNR 176
NNN + K YYNI+ + +
Sbjct: 99 NNNNYNNYKKLYYNINYIEQ 118
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNIDILNR 176
NNN + K YYNI+ + +
Sbjct: 99 NNNNYNNYKKLYYNINYIEQ 118
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNIDILNR 176
NNN + K YYNI+ + +
Sbjct: 97 NNNNYNNYKKLYYNINYIEQ 116
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNIDILNR 176
NNN + K YYNI+ + +
Sbjct: 107 NNNNYNNYKKLYYNINYIEQ 126
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 3.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 409 YVLCPIATMIARRHTDGTAGNNSACM 486
Y++ PI + A G GN S C+
Sbjct: 51 YIVLPITVIYAVIFVTGLVGNVSTCV 76
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 434 IVAMGHNT*KSTTKNGHHVLYCG 366
IV +GH +T GH + CG
Sbjct: 10 IVVIGHVDSGKSTTTGHLIYKCG 32
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 434 IVAMGHNT*KSTTKNGHHVLYCG 366
IV +GH +T GH + CG
Sbjct: 10 IVVIGHVDSGKSTTTGHLIYKCG 32
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.3
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -3
Query: 335 PIEPAKARDTRPIHVSTEV 279
P+EP + ++ P+H E+
Sbjct: 337 PVEPPRRKNNCPLHCKPEL 355
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 235 NNNTFRRIKCHYYNI 191
NNN + K YYNI
Sbjct: 342 NNNNYNNYKKLYYNI 356
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 5.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 301 GLVSLAFAGSIGMTFVILACALPQYKTWW 387
G+V +A S + V AC P+Y+ W+
Sbjct: 245 GVVHVAQDESTSLVCVAQACPTPEYR-WY 272
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 5.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 301 GLVSLAFAGSIGMTFVILACALPQYKTWW 387
G+V +A S + V AC P+Y+ W+
Sbjct: 245 GVVHVAQDESTSLVCVAQACPTPEYR-WY 272
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 7.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 233 ISYL*VCLFYIPCII 277
I Y + FYIPCII
Sbjct: 344 IIYSSLSSFYIPCII 358
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 445 GVQSLLLWDTIHRKVQQRMATMFYI 371
GV SLL T H K Q + + Y+
Sbjct: 280 GVTSLLTLSTQHAKSQASLPPVSYL 304
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 20.6 bits (41), Expect = 9.2
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = +1
Query: 382 WWPFFVVLFYVLCPIATMI 438
W FF+V+F + + T++
Sbjct: 410 WLSFFIVIFTYIIILITLV 428
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,669
Number of Sequences: 438
Number of extensions: 3604
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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