Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G17
(458 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 4e-11
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 61 5e-10
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 46 2e-05
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 44 5e-05
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 41 6e-04
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.003
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 38 0.004
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.005
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 37 0.009
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.009
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 36 0.012
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 35 0.028
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 35 0.028
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.028
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.037
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.065
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 33 0.15
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.20
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 30 0.80
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 30 1.1
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 1.1
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.1
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 29 1.8
SB_3857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_10099| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.6e-17) 28 4.3
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 27 5.6
SB_58134| Best HMM Match : DAGAT (HMM E-Value=0) 27 7.5
SB_8894| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) 27 7.5
SB_24711| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058) 27 7.5
SB_11608| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_38444| Best HMM Match : TMS_TDE (HMM E-Value=0) 27 9.9
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 27 9.9
SB_23341| Best HMM Match : Pkinase_Tyr (HMM E-Value=0.065) 27 9.9
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 64.5 bits (150), Expect = 4e-11
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +1
Query: 244 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAEDQRYKGIVDAFVRIPKEQG 420
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 421 LLSFWRG 441
LSFWRG
Sbjct: 69 FLSFWRG 75
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 62.9 bits (146), Expect = 1e-10
Identities = 28/64 (43%), Positives = 48/64 (75%)
Frame = +1
Query: 250 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLS 429
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q ++ ++KG++ ++I KE+G+L
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILG 89
Query: 430 FWRG 441
+++G
Sbjct: 90 YFKG 93
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 60.9 bits (141), Expect = 5e-10
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 217 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAEDQRYKGIVDA 393
MS + F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 394 FVRIPKEQGLLSFWR 438
+R + +G+ SFWR
Sbjct: 61 TMRTYRAEGIGSFWR 75
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 48.4 bits (110), Expect = 3e-06
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +1
Query: 265 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRG 441
GG A VS+TA AP++R+K+LLQVQ A GIV F + +E G+ S WRG
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRG 195
Score = 35.5 bits (78), Expect = 0.021
Identities = 19/64 (29%), Positives = 37/64 (57%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 438
LAG ++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+R
Sbjct: 235 LAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYR 287
Query: 439 GTSP 450
G P
Sbjct: 288 GLFP 291
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 438
LAG S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 213
Query: 439 GTSP 450
G +P
Sbjct: 214 GVTP 217
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 238 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQ 417
+ + + FL GG SA ++++ +P+E VK+L QV + G++ F + K +
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKRE 108
Query: 418 GLLSFWRG 441
G+ +FW+G
Sbjct: 109 GIKAFWKG 116
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 214 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAEDQRYKGI 384
K+ N P + G +S +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 385 VDAFVRIPKEQGLLSFWRGTSP 450
D F I KE+G + ++G +P
Sbjct: 79 KDCFRTILKEEGAMGLFKGLAP 100
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 438
L G S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 426 LVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNAH---YKGMRHALKTILREEGILALYK 482
Query: 439 GTSP 450
G +P
Sbjct: 483 GVTP 486
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Frame = +1
Query: 232 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA---------EDQRYKGI 384
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A D Y+G+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGM 69
Query: 385 VDAFVRIPKEQGLLSFWRGTSP 450
+ V + K +G+ + ++G P
Sbjct: 70 LGTMVTLFKTEGMKTMYKGLIP 91
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 259 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFW 435
+ G+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W
Sbjct: 118 IVAGVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLW 173
Query: 436 RGTSP 450
G P
Sbjct: 174 TGMKP 178
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = +1
Query: 220 SNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFV 399
SNL A +AGG + VS + P + +K +Q + RYKG++D +
Sbjct: 124 SNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCAL 179
Query: 400 RIPKEQGLLSFWRGTSP 450
+ KE+G++ F RG P
Sbjct: 180 QSYKEEGMIVFTRGIWP 196
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 301 APIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGTSP 450
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G P
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKGLGP 225
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 247 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLL 426
A++ +AG +S + A P++ +K+ LQ + K E +KG +D F++ + +GL
Sbjct: 21 ARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLR 79
Query: 427 SFWRG-TSPM 453
++G SP+
Sbjct: 80 GLYKGMLSPL 89
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 301 APIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGTSP 450
AP ER+K +LQV+ + + Y IV RI E+G+ +RG P
Sbjct: 139 APAERIKCILQVEAGASGSTQSGPY-AIVK---RIYAEEGVRGIFRGLPP 184
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 271 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGTSP 450
I A TAV PI+ VK +Q Q + ++ YK +D F ++ + +G + +RG P
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 36.7 bits (81), Expect = 0.009
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFW 435
F++G + V+ + P++ V+ L VQ +S + + Y GIV A RI E+G+ +
Sbjct: 32 FVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLY 89
Query: 436 RGTSP 450
+G P
Sbjct: 90 KGLVP 94
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFW 435
F A IS + A P++ K +Q + I YKG +D RI + +G+ + W
Sbjct: 97 FGASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALW 153
Query: 436 RGTSP 450
+G +P
Sbjct: 154 KGFTP 158
Score = 30.7 bits (66), Expect = 0.61
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 373 YKGIVDAFVRIPKEQGLLSFWRGTSP 450
Y + +A R+ KE+G+L+ WRG P
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIP 60
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 35.1 bits (77), Expect = 0.028
Identities = 12/32 (37%), Positives = 24/32 (75%)
Frame = +1
Query: 355 IAEDQRYKGIVDAFVRIPKEQGLLSFWRGTSP 450
I + ++Y G+++AF RI +++G+ +F+RG P
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVP 50
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 35.1 bits (77), Expect = 0.028
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1
Query: 262 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRG 441
AG ++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G
Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQLLNRPQG---EPNYNGIIDCAKKIYSNEGLAAFYKG 267
Query: 442 TSP 450
P
Sbjct: 268 AVP 270
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 35.1 bits (77), Expect = 0.028
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +1
Query: 250 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLS 429
K+ +AG + A + P++ +K+ LQ + K E YK D F +I + +G+
Sbjct: 40 KNSIAGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYY 98
Query: 430 FWRGTS 447
+RG +
Sbjct: 99 LFRGVT 104
Score = 34.7 bits (76), Expect = 0.037
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +1
Query: 208 SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIV 387
S K+ DP + AG I+ + + P++RVK +LQ++ + Y G V
Sbjct: 126 SYKLPVSKDP-ELLRSLAAGMIAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPV 180
Query: 388 DAFVRIPKEQGLLSFWRGTS 447
D RI +E G+ ++G S
Sbjct: 181 DCLRRIYREAGVRGVYKGIS 200
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 34.7 bits (76), Expect = 0.037
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 250 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLS 429
K LAGGI+ + P E VK LQ+ + A Y+G +D + K G+L
Sbjct: 42 KAILAGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLG 97
Query: 430 FWRGTSPM 453
+RG S +
Sbjct: 98 LYRGLSSL 105
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 33.9 bits (74), Expect = 0.065
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGL-LSF 432
F+ GG++ AVS+T P++ V+ +Q ++ + + +Y ++ V + K+ G+
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRGL 232
Query: 433 WRGTS 447
+RG S
Sbjct: 233 YRGLS 237
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 32.7 bits (71), Expect = 0.15
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 268 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 438
G+S +KT AP+ER+K+L Q Q+ + + + A I K++GL +++
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 385 VDAFVRIPKEQGLLSFWRGTSP 450
+DA ++IP+ +GL S WRG P
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPP 85
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 30.3 bits (65), Expect = 0.80
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 250 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAEDQRYKGIVDAFVRIPKEQGLL 426
K+F+ G +A+ + P+E VK +Q+Q + + Y+ + A I K +G+L
Sbjct: 6 KEFVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGIL 65
Query: 427 SFWRGTSP 450
+ +G P
Sbjct: 66 AMQKGLFP 73
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 286 SKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRG 441
S+ VA ER +L+ Q Q D RY+G +D+F + +G L +RG
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRG 329
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 262 AGGISAAVSKTAVAPIERVKLLLQ 333
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFW 435
F +GGI+ +S P++ VK Q + +Y G D +I G+ +F
Sbjct: 361 FFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFG 420
Query: 436 RG 441
+G
Sbjct: 421 QG 422
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +1
Query: 250 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLS 429
K+F AGG P++ +K+ LQ K E + G D ++ + +G
Sbjct: 28 KNFFAGGFGGVCCIATGHPLDTIKVRLQTMPRPKP-GEKPMFTGTFDCAMKTIRNEGFFG 86
Query: 430 FWRG 441
++G
Sbjct: 87 LYKG 90
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 229 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAE 363
ADP + + AG + + +AP ER+K LLQ+ + K E
Sbjct: 122 ADPT-YLQIMNAGAFAGVCTTAIMAPGERIKCLLQILALQKAKTE 165
>SB_3857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 438
+ G +A + A E + + + VQ V K+ Y G+ + I E G+L F+
Sbjct: 115 IRNGAAACEANWTAAAEELITVRMVVQFVGKEAI----YTGLTSSIKEIYNEHGILGFFA 170
Query: 439 GTSP 450
G P
Sbjct: 171 GLVP 174
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 276 RRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQGYRRRLRPHS 407
RR +D R + +R+ +PSP +++ RR P+ RR R S
Sbjct: 1076 RRTPEDRRRSRGSRR--SPSPPKREPRRRSPSASPPRREARKRS 1117
>SB_10099| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.6e-17)
Length = 629
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 372 LQGYRRRLRPHSQGAGSALILAWYFANV 455
L+GY RR+RP S+G + + Y +N+
Sbjct: 352 LEGYDRRIRPGSKGEPVVVYVDMYVSNI 379
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 438
LAG + A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R
Sbjct: 2 LAGACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYR 53
>SB_58134| Best HMM Match : DAGAT (HMM E-Value=0)
Length = 288
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = -1
Query: 275 EIPPARKSLANATGSARFDILFDYVVLFGWILADKEGLRH 156
+ P + G+ +F + DY++ FG +KE + H
Sbjct: 135 KFPGITPHILTLAGNMKFPVTRDYMMAFGVCTVEKESIHH 174
>SB_8894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 235 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKE 414
P + K IS+AV KTAV R K +V +S++ ++ +VDA +
Sbjct: 41 PETYNKRIFKAPISSAVEKTAVVKTRRKKGAKEVTTMSEKRWQEMSCCKMVDAIYDTEEA 100
Query: 415 QGLL 426
+ LL
Sbjct: 101 KRLL 104
>SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)
Length = 492
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 264 WRYLRRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQGYRRRLRPHSQGAGSAL 428
WR ++ LQ HR + A+Q+ R LQG R R +G GSA+
Sbjct: 379 WRERQKELQGKGGRHRGNGEGSAVNAQQEWRERQKELQGKGGRHR--GKGEGSAV 431
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 264 WRYLRRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQGYRRRLRPHSQG 413
WR ++ LQ HR + A+Q+ R LQG R R + +G
Sbjct: 437 WRERQKELQGKGGRHRGNGEGSVVDAQQEWKERQKELQGKGGRHRGNGEG 486
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +3
Query: 264 WRYLRRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQGYRRRLRPHSQGAGSAL 428
W+ ++ LQ HR + A+Q+ R LQG R R G GSAL
Sbjct: 263 WKERQKELQGKGGRHRGNGEGSVVNAQQEWKERQKELQGKGGRHR--GNGEGSAL 315
>SB_24711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 259 ESLWRTRLDRRDSTFCSIMWSSLGGYLRTRKDFGTHG 149
E+L R + DRR T + GG+++ RK F +G
Sbjct: 96 ENLIRFKSDRRGKTLIQLRNLGKGGWIKPRKLFNENG 132
>SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058)
Length = 820
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 174 QGRTSAHTEWKNHEKRTPD 118
QGRT HT NHEK T +
Sbjct: 675 QGRTGGHTASDNHEKGTKE 693
>SB_11608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 854
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 12 PCRTARERDRSNFKKGTHLPLCSCDHEITPNLLIKNRGFVFRGFSIPCVP 161
PC+ D+ ++ HLP C+ ++ T N N G +G C+P
Sbjct: 318 PCQQCNSNDKFHWTNNNHLP-CNDNNSTTKNDYCDNGG--CKGHPYNCLP 364
>SB_38444| Best HMM Match : TMS_TDE (HMM E-Value=0)
Length = 1031
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/41 (24%), Positives = 24/41 (58%)
Frame = +3
Query: 264 WRYLRRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQGYR 386
W+ +R+R ++ +S R+ AP+ ++ ++G ++ YR
Sbjct: 395 WQTIRKRKKNQKSTREGRKSKAPAADSKECSKKGKAMK-YR 434
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 250 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 339
+ FLAGG ++ V +T P++ + L +Q
Sbjct: 107 RGFLAGGCASIVGQTITVPVDIISQKLMIQ 136
>SB_23341| Best HMM Match : Pkinase_Tyr (HMM E-Value=0.065)
Length = 263
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +3
Query: 264 WRYLRRRLQDSRSAHRARQIAAPSPARQQTD 356
+R R Q SRSA I A SP RQQTD
Sbjct: 222 YRQYRTINQTSRSAVTNVSIFANSPTRQQTD 252
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,981,331
Number of Sequences: 59808
Number of extensions: 336499
Number of successful extensions: 1221
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -