Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G16
         (262 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   1.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   3.2  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          22   4.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   5.6  

>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 79  FHIYNLIRILNKNKHKSFEKVSEPLV 2
           FH+  L+R+L+KN      K S+ L+
Sbjct: 130 FHLLLLVRLLDKNDLPKATKCSQDLM 155


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 101  HIKFDIDFALEEQYGALPLPFPGMDKSTA 187
            H +F IDF L   +      F G D+S A
Sbjct: 1592 HNQFQIDFQLAPYFDYYNASFYGSDRSFA 1620


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 217 RLWQWPSVSIQT 252
           RLW+WP ++  T
Sbjct: 90  RLWRWPDLNSHT 101


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 109  IRYRFCFRRTIWSITTTFPWNGQ 177
            +  RF +  ++     +F WNGQ
Sbjct: 1598 VALRFVYNTSVDDSKLSFSWNGQ 1620


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,232
Number of Sequences: 2352
Number of extensions: 4378
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 13983072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)