Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G15
         (514 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK075278-1|BAC11515.1|  429|Homo sapiens protein ( Homo sapiens ...    29   7.2  
AK001208-1|BAA91554.1|  263|Homo sapiens protein ( Homo sapiens ...    29   7.2  
AC098818-1|AAY40926.1|  662|Homo sapiens unknown protein.              29   7.2  
BC064947-1|AAH64947.1|  735|Homo sapiens SMPD4 protein protein.        29   9.5  
AK000763-1|BAA91368.1|  605|Homo sapiens protein ( Homo sapiens ...    29   9.5  
AB037839-1|BAA92656.1|  889|Homo sapiens KIAA1418 protein protein.     29   9.5  

>AK075278-1|BAC11515.1|  429|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90797 fis, clone THYRO1001770, weakly similar to
           PROBABLE SERINE/THREONINE-PROTEIN KINASE YNL020C (EC
           2.7.1.-). ).
          Length = 429

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 18/82 (21%), Positives = 35/82 (42%)
 Frame = +3

Query: 255 KQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQHPGHRES*VPDRRALRVKH 434
           +Q  +QHRH H       ++      Q   +++Q    +Q H  H    + D    + +H
Sbjct: 216 QQLHLQHRHPHQQQQQQQQQQQ--QQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQH 273

Query: 435 ATKLLSPEWITYRTIEHTSYPP 500
           AT+    + +  + + H+ Y P
Sbjct: 274 ATQ--QQQMLQQQFLMHSVYQP 293


>AK001208-1|BAA91554.1|  263|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10346 fis, clone NT2RM2001004. ).
          Length = 263

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 315 PVW*SLQTLHRERQSSHPEQQHPGHRES*VPDRRALRVKHATKLLSPEWITYR 473
           PVW  L  + R+   S P+Q HP H  +  P    LR   + KL    +  YR
Sbjct: 76  PVWLCLSPVPRQLGGSIPKQMHPAHDGT--PGTPILRTLQSFKLELAGFCLYR 126


>AC098818-1|AAY40926.1|  662|Homo sapiens unknown protein.
          Length = 662

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 18/82 (21%), Positives = 35/82 (42%)
 Frame = +3

Query: 255 KQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQHPGHRES*VPDRRALRVKH 434
           +Q  +QHRH H       ++      Q   +++Q    +Q H  H    + D    + +H
Sbjct: 449 QQLHLQHRHPHQQQQQQQQQQQ--QQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQH 506

Query: 435 ATKLLSPEWITYRTIEHTSYPP 500
           AT+    + +  + + H+ Y P
Sbjct: 507 ATQ--QQQMLQQQFLMHSVYQP 526


>BC064947-1|AAH64947.1|  735|Homo sapiens SMPD4 protein protein.
          Length = 735

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +3

Query: 207 WTQQWKIKWVYRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQH 380
           W   + ++ +Y+++ +   +++  H   SV      P   SLQ LH  ++S  P ++H
Sbjct: 178 WLHHYSLE-MYQKMQSPHAKLEVLHYRLSVSSALYSPAQPSLQALHAYQESFTPTEEH 234


>AK000763-1|BAA91368.1|  605|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20756 fis, clone HEP01556. ).
          Length = 605

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +3

Query: 207 WTQQWKIKWVYRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQH 380
           W   + ++ +Y+++ +   +++  H   SV      P   SLQ LH  ++S  P ++H
Sbjct: 2   WLHHYSLE-MYQKMQSPHAKLEVLHYRLSVSSALYSPAQPSLQALHAYQESFTPTEEH 58


>AB037839-1|BAA92656.1|  889|Homo sapiens KIAA1418 protein protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +3

Query: 207 WTQQWKIKWVYRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQH 380
           W   + ++ +Y+++ +   +++  H   SV      P   SLQ LH  ++S  P ++H
Sbjct: 332 WLHHYSLE-MYQKMQSPHAKLEVLHYRLSVSSALYSPAQPSLQALHAYQESFTPTEEH 388


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,680,437
Number of Sequences: 237096
Number of extensions: 1231217
Number of successful extensions: 2655
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2655
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)