Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G15
(514 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 27 0.086
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 27 0.15
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 27 0.15
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 27 0.15
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 27 0.15
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 27 0.15
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 27 0.15
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 27 0.15
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 26 0.26
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 25 0.35
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.9
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 22 4.3
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 5.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 5.7
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 21 7.5
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 7.5
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 7.5
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 7.5
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 21 7.5
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 27.5 bits (58), Expect = 0.086
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 237 YRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQ 356
+++L N+ +I R R + HRR VW Q RE +
Sbjct: 15 FKQLRNEDSKIDLRSRTKEERLQHRREVWLIQQEREREHE 54
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 26.6 bits (56), Expect = 0.15
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 237 YRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQ 356
+++L N+ +I R R + HRR VW Q RE +
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHE 54
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.6 bits (56), Expect = 0.15
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 237 YRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQ 356
+++L N+ +I R R + HRR VW Q RE +
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHE 54
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 26.6 bits (56), Expect = 0.15
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 237 YRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQ 356
+++L N+ +I R R + HRR VW Q RE +
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHE 54
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 26.6 bits (56), Expect = 0.15
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 237 YRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQ 356
+++L N+ +I R R + HRR VW Q RE +
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHE 54
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.6 bits (56), Expect = 0.15
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 237 YRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQ 356
+++L N+ +I R R + HRR VW Q RE +
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHE 54
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.6 bits (56), Expect = 0.15
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 237 YRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQ 356
+++L N+ +I R R + HRR VW Q RE +
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHE 54
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 26.6 bits (56), Expect = 0.15
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 237 YRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQ 356
+++L N+ +I R R + HRR VW Q RE +
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHE 54
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.8 bits (54), Expect = 0.26
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 304 TTAARFGDPSKHFTANDSHHIRNS 375
TT DP+ HF N SH I+ S
Sbjct: 679 TTEKLSTDPNTHFQVNQSHGIKRS 702
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 25.4 bits (53), Expect = 0.35
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 282 RHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQHPGHRES*VPDRRALRVKHATKLLS 452
R+T ++ + +LQT+ + HP+ ++ +PD R L H+ KLL+
Sbjct: 354 RNTELVERMHNKLRNALQTVLAQNHPQHPDILRELLKK--IPDLRTLNTLHSEKLLA 408
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/40 (25%), Positives = 16/40 (40%)
Frame = +3
Query: 264 QIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQHP 383
Q H H ++ + H RP Q R++Q + P
Sbjct: 145 QNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQEERRLRP 184
Score = 21.0 bits (42), Expect = 7.5
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 282 RHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQHPGHRE 395
RH + HH ++Q HR Q +QQ R+
Sbjct: 140 RHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQ 177
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.8 bits (44), Expect = 4.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 168 LTNRSKVEFHH 200
LTNR V FHH
Sbjct: 112 LTNRKSVVFHH 122
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 103 IIHKTKIISLLSVTCFKY 156
I+ KT + L V C+KY
Sbjct: 309 ILQKTTLNMLTQVECYKY 326
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +1
Query: 322 GDPSKHFTANDSHHIRNSSIPATGKARSRTDGHY 423
G P +FT HH R T + R+ HY
Sbjct: 143 GTPRINFTKLKRHHPRYKRPRTTFEPRATDSRHY 176
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 168 LTNRSKVEFHH 200
LTNR V FHH
Sbjct: 113 LTNRKGVVFHH 123
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 44 IYVDIFLYFEQKLAL 88
IY++ F Y +QKL L
Sbjct: 132 IYIESFSYHKQKLRL 146
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTH 487
C C+KT + V + RTH
Sbjct: 178 CTVCSKTFIQSGQLVIHMRTH 198
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/39 (20%), Positives = 17/39 (43%)
Frame = +1
Query: 349 NDSHHIRNSSIPATGKARSRTDGHYVSNMQQNCCHQSGL 465
N++ HI++S I T + ++ +NC +
Sbjct: 286 NETAHIKDSLIVLTSALQEMNKSKSITEPPKNCADSGSI 324
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 168 LTNRSKVEFHH 200
LTNR V FHH
Sbjct: 234 LTNRKGVVFHH 244
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,358
Number of Sequences: 438
Number of extensions: 2722
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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