Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G13
(290 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 30 0.27
06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683... 30 0.36
03_02_0701 - 10523053-10523220,10523802-10523916,10524102-105241... 29 0.47
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 28 1.4
07_03_1781 + 29468919-29468951,29469057-29469184,29469349-294694... 27 1.9
05_05_0125 - 22561972-22562028,22562318-22562416,22562496-225626... 27 1.9
03_05_0183 - 21681673-21682524 27 1.9
05_03_0336 - 12643942-12644816,12645021-12645276,12645667-12646380 27 2.5
03_05_0181 - 21621561-21621932,21622024-21622329 27 2.5
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164... 27 3.3
04_04_1695 + 35433975-35437040 27 3.3
03_03_0107 + 14504065-14504448,14504545-14504922,14506011-145066... 27 3.3
11_06_0389 + 23055896-23056486,23056957-23057109,23057652-230579... 26 4.4
09_04_0377 + 17086775-17088310 26 4.4
07_03_1495 + 26983415-26984797 26 4.4
03_05_0112 + 20955777-20956359,20956533-20957707 26 4.4
03_02_0661 + 10247128-10247895 26 4.4
03_02_0654 - 10211164-10211222,10211607-10211667,10212175-102122... 26 4.4
01_01_0981 + 7766025-7766753 26 4.4
11_01_0389 - 2937242-2939476,2939556-2939666,2941254-2941450,294... 26 5.8
09_04_0446 - 17680408-17680721,17680812-17681108,17682740-17683490 26 5.8
07_01_0116 - 855122-855352,856733-857059,857095-858481,858636-85... 26 5.8
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 26 5.8
03_05_0109 - 20903013-20903062,20903406-20903538,20903631-209037... 26 5.8
02_05_0098 - 25807993-25808193,25808629-25808710,25808891-258089... 26 5.8
11_04_0179 + 14562288-14562860,14562874-14563489,14563529-145636... 25 7.7
10_07_0164 - 13724831-13725130,13725177-13725320 25 7.7
08_02_1325 - 26146775-26147247,26147397-26148579 25 7.7
07_01_0098 + 735015-735152,736749-736815,737008-737079,737109-73... 25 7.7
06_01_0289 - 2111768-2114377,2114970-2115025,2115272-2115323 25 7.7
05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447 25 7.7
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 25 7.7
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 30.3 bits (65), Expect = 0.27
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +2
Query: 77 KMTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREERRLS 256
+ ++ A ++R +TS E + SS + S S E+R+S K ++R
Sbjct: 580 RASLAAQKKRSVTSSSESSESSDYSSSSDSESDVSSDSREDRKSARQLKHDELERKKRSQ 639
Query: 257 SPRKKELEKR 286
++KELEK+
Sbjct: 640 DEKRKELEKQ 649
>06_01_0893 -
6834350-6834464,6835042-6835218,6835301-6835350,
6836348-6836416,6836495-6836593,6836681-6836759,
6837604-6837704,6838645-6838713,6839548-6839588,
6839793-6841159,6841472-6841575,6841914-6842351,
6843040-6843567
Length = 1078
Score = 29.9 bits (64), Expect = 0.36
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 164 AASCEVYGSVEERRSLTSKKKQACREERRLSSPRKKELEK 283
A + + SVE RR ++++ R E R S RK+E+EK
Sbjct: 82 AEAAALASSVEVRRLEVEEEEEKARRESREESVRKREMEK 121
>03_02_0701 -
10523053-10523220,10523802-10523916,10524102-10524172,
10524263-10524420,10524497-10524590,10524678-10524766,
10525322-10525419,10525492-10525625,10525714-10525797,
10525903-10526151
Length = 419
Score = 29.5 bits (63), Expect = 0.47
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 95 VERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKK-KQACREE 244
V +RP K +DMM W + A A + + S +ER S K+ + CREE
Sbjct: 283 VMQRP--GKPDDMMQSWMDQFEADADNKCWASFQERVSRAPKQVLRYCREE 331
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 13 AEDELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEER 126
+E++L +ED +A +M ++DCNR ++ +L R
Sbjct: 555 SEEDLSEEDIRAIHEEMEGSVDEDCNRSDEEYDDLAMR 592
>07_03_1781 +
29468919-29468951,29469057-29469184,29469349-29469433,
29469771-29469824,29470072-29470163,29470280-29470383,
29470811-29470886,29471231-29471678,29471874-29471916,
29471977-29472209,29472302-29472505,29472595-29472693,
29472789-29472861,29473373-29473500,29473614-29473836,
29473992-29474215,29474296-29474423,29475053-29475167,
29475603-29475658,29475795-29475888,29475966-29476152,
29476229-29476309,29476384-29476484,29476567-29476629,
29476800-29476907
Length = 1059
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 104 RPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACR-EERRLSSPRKKEL 277
R L + ++ ++V W A S YG + + +T ++ A E+ +S+ ++E+
Sbjct: 191 RVLIAYEKGLLVLWDVSEDRAISVRGYGDLHMKNQITGAQRDAGEDEDNNISAEEEREI 249
>05_05_0125 -
22561972-22562028,22562318-22562416,22562496-22562624,
22563312-22563355,22563570-22563642,22563791-22563877,
22563985-22564069,22565460-22565533,22565612-22566192,
22566275-22568270
Length = 1074
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 171 EAAAEESFGQHTIISSFFEVSG--LLSTAITVIFFD 70
+A+AEE F QH ++ F++SG ++ V+ FD
Sbjct: 682 QASAEEVFQQHLVLEEDFKLSGSSIMKNVNLVVKFD 717
>03_05_0183 - 21681673-21682524
Length = 283
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 141 VGQMTLLLQLLVKSTGVSKKEDRLPRKKNKHAAKKE 248
VG+MT L + L + E+ + + NKHAA E
Sbjct: 188 VGKMTALKEKLTRGAAAFAGEEEIVQALNKHAATAE 223
>05_03_0336 - 12643942-12644816,12645021-12645276,12645667-12646380
Length = 614
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 211 YLEKKTSMPRRKKTIKPAEEGVGKKR 288
+LEK+T+MPR + KP + V K+
Sbjct: 550 FLEKETTMPRNRYWKKPVKSNVPAKK 575
>03_05_0181 - 21621561-21621932,21622024-21622329
Length = 225
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 141 VGQMTLLLQLLVKSTGVSKKEDRLPRKKNKHAAKKE 248
VG+MT L + L + E+ + + NKHAA E
Sbjct: 128 VGKMTALKEKLTRGAAAFVGEEEIVQALNKHAATAE 163
>08_01_0207 -
1647168-1647251,1647583-1647726,1648176-1648287,
1648392-1648573,1648649-1648780,1648900-1649856,
1649949-1650734
Length = 798
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 119 KKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREE 244
++ D +C P + A SC ++ E+R L K R E
Sbjct: 417 RQSDTFICLPEATDEAISCNKDETIREKRELLVDKYDFGRSE 458
>04_04_1695 + 35433975-35437040
Length = 1021
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 102 LSTAITVIFFDGCHLSSTG 46
L T +TV FD CHL+ G
Sbjct: 672 LCTVVTVAVFDNCHLTGGG 690
>03_03_0107 +
14504065-14504448,14504545-14504922,14506011-14506619,
14507110-14507237,14507829-14507832
Length = 500
Score = 26.6 bits (56), Expect = 3.3
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +2
Query: 59 R*QPSKKMTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACR 238
R Q +++ V + +R +KE P ++ +A S + G+ +E + +K A +
Sbjct: 405 RLQGKERLPVEYLPQRKRNGEKEKKAK--PTETPSAESFKK-GAQKETKEEKKARKAAVK 461
Query: 239 EERRLSSPRKKELE 280
EE+R + KKEL+
Sbjct: 462 EEKREARKAKKELK 475
>11_06_0389 +
23055896-23056486,23056957-23057109,23057652-23057957,
23058558-23058995
Length = 495
Score = 26.2 bits (55), Expect = 4.4
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 98 ERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREERRLSSPRKKE 274
+R+ SKK + +DS AAA+ S +++ + KK++A +SP+KKE
Sbjct: 12 KRKKKHSKKPEDSNATVDDSLAAAASP---SPKKKEKHSKKKREAIDATMAAASPKKKE 67
>09_04_0377 + 17086775-17088310
Length = 511
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 180 STGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
S G ED + R+K K + + + + RGR S +K+
Sbjct: 250 SEGSYDSEDSMDRRKKKRSRRHKKSKRRGRSSRRKK 285
>07_03_1495 + 26983415-26984797
Length = 460
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 1 ARGPAEDELKKEDYQACGRKMTTVEEDD 84
A+ D K DY R+ TT EE+D
Sbjct: 383 AKHETSDSSKDSDYSMVSRQRTTTEEED 410
>03_05_0112 + 20955777-20956359,20956533-20957707
Length = 585
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 211 YLEKKTSMPRRKKTIKPAEEGVGKKR 288
+LEK+T+MPR + KP + V K+
Sbjct: 526 FLEKETTMPRNRYWRKPVKSPVPAKK 551
>03_02_0661 + 10247128-10247895
Length = 255
Score = 26.2 bits (55), Expect = 4.4
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 146 PNDSSAAASCEVYGSVEERRSLTSKKKQACR-EERRLSSPRKKELEK 283
P AAA + G+ E R +K+K+A R EERRL + R E+E+
Sbjct: 186 PCTEVAAALDRLAGTYE--RVEVAKQKEATRLEERRLEAMRDLEIER 230
>03_02_0654 -
10211164-10211222,10211607-10211667,10212175-10212249,
10212390-10212467,10213537-10213604,10214538-10214622,
10214727-10214750
Length = 149
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 214 GKRSSFFDTPVDF---TRSCSRRVIWPTHHHIFFLRG*WSSFYG 92
G + F D P D T SC +++ P H+ IF + G F G
Sbjct: 104 GTNTLFQDKPHDMLPKTWSCQGQILTPGHYKIFDIAGVLEFFMG 147
>01_01_0981 + 7766025-7766753
Length = 242
Score = 26.2 bits (55), Expect = 4.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 166 CSRRVIWPTHHHI 128
CS +WP HHHI
Sbjct: 45 CSSHHLWPGHHHI 57
>11_01_0389 -
2937242-2939476,2939556-2939666,2941254-2941450,
2941543-2941633
Length = 877
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +1
Query: 28 KKEDYQACGRKMTTVEEDDCNRRRKKTTN 114
+K+++Q+ G ++ +ED +R+K+ TN
Sbjct: 684 RKDNHQSEGNNLSHRDEDPTRKRKKQKTN 712
>09_04_0446 - 17680408-17680721,17680812-17681108,17682740-17683490
Length = 453
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 161 AAASCEVYGSVEERRSLTSKKKQACREERRLSSPRKKE 274
A ++C + GS E T +K+ACRE + +KK+
Sbjct: 12 ARSACSLVGSSHE--PTTVARKRACREPKPRPEKKKKD 47
>07_01_0116 -
855122-855352,856733-857059,857095-858481,858636-858895
Length = 734
Score = 25.8 bits (54), Expect = 5.8
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -1
Query: 257 LIVFFLRGMLVFFSR*AIF-FLRHSRRLHKKLQQKSHLANTPSYLLSSRLVVFFLRRLQS 81
++V ML+F A+F FLR RR L Q + + SY+LSS LV + L +QS
Sbjct: 16 VLVVLAACMLIFL---AVFGFLR--RRCTNPLFQTAVMG---SYVLSSSLVTYTLGSMQS 67
Query: 80 SSS 72
S++
Sbjct: 68 SAA 70
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 119 KKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREERRLSSPRKK 271
K+ D P D CE G E+R KKK+ R++R++ +K
Sbjct: 58 KRGDDDYALPGDGDLVVECEEEGEKGEKR---VKKKRRSRKKRKVKEMEEK 105
>03_05_0109 -
20903013-20903062,20903406-20903538,20903631-20903726,
20904011-20904168,20904278-20904392,20904486-20904539,
20904818-20904925,20905406-20905495,20905907-20906086,
20906204-20906516,20906619-20906794
Length = 490
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = +2
Query: 68 PSKKMTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREER 247
P K + ++ K + + A+ E+Y E+ S S K QA +E+
Sbjct: 249 PEKLQRALEEKKTARAELKNAEKIAMQSVQEKTATLEIYSKGYEKLSKHSSKIQALQEQF 308
Query: 248 RLSSPRKKELEKR 286
+ +KE++ R
Sbjct: 309 TATKALEKEVKAR 321
>02_05_0098 -
25807993-25808193,25808629-25808710,25808891-25808978,
25809062-25809133,25809388-25809556
Length = 203
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 174 VKSTGVSKKEDRLPRKKNKHAAKKEDYQA 260
V T + KKE+ L RKK ++A K ++ +A
Sbjct: 128 VIKTQLKKKEEELERKKAEYAEKAKNKEA 156
>11_04_0179 +
14562288-14562860,14562874-14563489,14563529-14563658,
14563694-14564540
Length = 721
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 211 YLEKKTSMPRRKKTIKPAEEGVGKKR 288
+LEK+T+MPR + KP + + K+
Sbjct: 657 FLEKETTMPRNRYWRKPVKPTLSAKK 682
>10_07_0164 - 13724831-13725130,13725177-13725320
Length = 147
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 70 VEEDDCNRRRKKTTNLEERRYDG 138
V+ED N+R K+ T +E+R DG
Sbjct: 38 VQEDSGNKRTKEETISKEKRPDG 60
>08_02_1325 - 26146775-26147247,26147397-26148579
Length = 551
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 186 GVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
G +KE R+K+KH+ K + + + +R K +D
Sbjct: 30 GRERKEKNSDRRKDKHSKKHKREKHKDKRKNKDDD 64
>07_01_0098 +
735015-735152,736749-736815,737008-737079,737109-737188,
737649-737718,737842-737921
Length = 168
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 4 RGPAEDELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERR 129
R P ++ +ED+ G T + E C RRK+ + RR
Sbjct: 95 RKPGGNKQNREDFVKKGYGETKLREGACMERRKRMEFYKTRR 136
>06_01_0289 - 2111768-2114377,2114970-2115025,2115272-2115323
Length = 905
Score = 25.4 bits (53), Expect = 7.7
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = -3
Query: 285 LFSNSFFRGLDSLLSSRHACFFFEVSDXXXXXXXXXSQEAAAEESFGQHTIISSFFEVSG 106
L SN+F + LLS HA +++D S A G+H I F +S
Sbjct: 688 LRSNNFSGKIPELLSQLHALQILDIADNNLSGPVPKSLGNLAAMQLGRHMIQQQFSTISD 747
Query: 105 L 103
+
Sbjct: 748 I 748
>05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447
Length = 607
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +2
Query: 149 NDSSAAASCEVYGSVEERRSLTSKKKQACREERRLSSPRKKELEK 283
NDS + +C V S E + + C ++ + R+K+L +
Sbjct: 469 NDSGGSETCAVGRSAEAEPPAVESRPEGCEQDGASTICREKQLAR 513
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 25.4 bits (53), Expect = 7.7
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 53 EER*QPSKKMTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQA 232
EE+ K+ ++ VE L ++KE++M + AAA EE+ L SK +
Sbjct: 386 EEKHLLESKLKLLGVEIDDLIAEKEELMNSMNIERGAAA--------EEKEMLVSKHSK- 436
Query: 233 CREERRLSSPRKKELE 280
C E + KELE
Sbjct: 437 CLTELEKAQSSVKELE 452
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,812,876
Number of Sequences: 37544
Number of extensions: 145722
Number of successful extensions: 671
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 316296968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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