Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G13
(290 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.37
SB_1006| Best HMM Match : GPP34 (HMM E-Value=3.6) 30 0.37
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 30 0.37
SB_6484| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.65
SB_12321| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.86
SB_819| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.86
SB_59182| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.86
SB_8269| Best HMM Match : Involucrin (HMM E-Value=0.15) 29 0.86
SB_13998| Best HMM Match : Kringle (HMM E-Value=0.0016) 28 1.1
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 28 1.5
SB_25960| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.0
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 27 2.0
SB_35998| Best HMM Match : SURF6 (HMM E-Value=4.8) 27 3.5
SB_26997| Best HMM Match : WD40 (HMM E-Value=1.3e-08) 27 3.5
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6) 27 3.5
SB_5541| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_26686| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_59583| Best HMM Match : CSE2 (HMM E-Value=5.4) 26 4.6
SB_46038| Best HMM Match : TRI5 (HMM E-Value=3.5) 26 6.1
SB_36313| Best HMM Match : Crl (HMM E-Value=5.1) 26 6.1
SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024) 26 6.1
SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 26 6.1
SB_19753| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_1134| Best HMM Match : DMAP_binding (HMM E-Value=6.4) 26 6.1
SB_49770| Best HMM Match : SURF6 (HMM E-Value=0.92) 25 8.0
SB_41189| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) 25 8.0
SB_30819| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 25 8.0
SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45) 25 8.0
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 25 8.0
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0) 25 8.0
>SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 29.9 bits (64), Expect = 0.37
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 19 DELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERR 129
DELK+ + K+ T E DD RR TN ERR
Sbjct: 371 DELKRATSEYDESKIATSEYDDQRERRVSMTNQRERR 407
>SB_1006| Best HMM Match : GPP34 (HMM E-Value=3.6)
Length = 426
Score = 29.9 bits (64), Expect = 0.37
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 80 MTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQ 229
M I ER SK ED+ C P D E G V E+R + + +Q
Sbjct: 255 MVEINGERSDEGSKTEDVSTCKPEDVDVVEKAEGEGVVREKREVQIETEQ 304
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 29.9 bits (64), Expect = 0.37
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 194 EERRSLTSKKKQACREERRLSSPRKKELEKR 286
EE+R L ++KK+ R ER R+K+ EKR
Sbjct: 289 EEKRKLEAEKKEKERVEREQREERRKQEEKR 319
>SB_6484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 29.1 bits (62), Expect = 0.65
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 176 EVYGSVEERRSLTSKKKQACREERRLSSPRKKELEK 283
E+ G ++ RS T+ C++ERR+ K +EK
Sbjct: 508 EIEGKLDALRSRTASLNSTCKKERRILEQVKPRIEK 543
>SB_12321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.7 bits (61), Expect = 0.86
Identities = 22/82 (26%), Positives = 34/82 (41%)
Frame = +2
Query: 32 KRTIKPVEER*QPSKKMTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSL 211
+ I+ E+ + KK TV+ RRP ED P + + G + RSL
Sbjct: 72 EEVIEQDEDEPKRKKKKTVVKAYRRPKDDSDEDKKSKQPPKPKKSEAPPREGLRKSSRSL 131
Query: 212 TSKKKQACREERRLSSPRKKEL 277
T K + + R+ KK+L
Sbjct: 132 TVSKVEE-HKRRQYEEKEKKKL 152
>SB_819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 28.7 bits (61), Expect = 0.86
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 217 EKKTSMPRRKKTIKPAEEGVGK 282
+K T PRRKK K EEG GK
Sbjct: 158 DKPTKRPRRKKKKKKEEEGEGK 179
>SB_59182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.7 bits (61), Expect = 0.86
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 217 EKKTSMPRRKKTIKPAEEGVGK 282
+K T PRRKK K EEG GK
Sbjct: 94 DKPTKRPRRKKKKKKEEEGEGK 115
>SB_8269| Best HMM Match : Involucrin (HMM E-Value=0.15)
Length = 334
Score = 28.7 bits (61), Expect = 0.86
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 217 EKKTSMPRRKKTIKPAEEGVGK 282
+K T PRRKK K EEG GK
Sbjct: 300 DKPTKRPRRKKKKKKEEEGEGK 321
>SB_13998| Best HMM Match : Kringle (HMM E-Value=0.0016)
Length = 832
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 7 GPAEDELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERR 129
G +EDE +DY+A K ED + RR+K +ERR
Sbjct: 669 GGSEDETS-DDYKAKRVKKRARREDSRDERRRKRERRDERR 708
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 1 ARGPAEDELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERR 129
A + E K + RKM EED+ R + TT L+E R
Sbjct: 1249 ADSDGQKEAAKREIANLSRKMAETEEDNRVREKDLTTALDESR 1291
>SB_25960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 158 SAAASCEVYGSVEERRSLTSKKKQACREERRLSSPRKKELEKR 286
+AAA +V+ ++ T KKK+ + ++ ++P+KK K+
Sbjct: 116 TAAAKKPAKKAVKPKKKATPKKKKPAAKPKKKATPKKKAAAKK 158
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 188 SVEERRSLTSKKKQACREERRLSSPRKKELEKR 286
+ + ++ T KKK A ++ ++ SP+K + K+
Sbjct: 141 AAKPKKKATPKKKAAAKKTKKAKSPKKAKSPKK 173
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 192 SKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
++KE++ R+K K KKE+ ++R + KKE+
Sbjct: 155 TRKEEK-EREKEKEKTKKEEKESREKEKTKKEE 186
>SB_35998| Best HMM Match : SURF6 (HMM E-Value=4.8)
Length = 279
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 174 VKSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
VK+ + ED+ +KK K A K++ +GR K D
Sbjct: 87 VKTVKPAVTEDKPKKKKEKSAVKEDKVTKKGRNPVSKAD 125
>SB_26997| Best HMM Match : WD40 (HMM E-Value=1.3e-08)
Length = 175
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 137 VCWPNDSSAAASCEVYGSV 193
VCW D S ASC+ G+V
Sbjct: 146 VCWNYDESLLASCDTEGTV 164
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 195 KKEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
K+++R ++K KH KKE + R + +KE
Sbjct: 344 KQKERREKEKQKHQEKKEKERQREKEKLEKE 374
>SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6)
Length = 256
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 194 EERRSLTSKKKQACREERRLSSPRKKELEK 283
E+R+ L K K EER L R+KE E+
Sbjct: 158 EQRKRLVEKVKNEGEEERMLHDQRQKEEEQ 187
>SB_5541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = -1
Query: 269 SSAGLIVFFLRGMLVFFSR*AIFFLRHSRRLHKKLQQKSHLANTP 135
S GL++ G+LVF R +++ + ++ ++++ KSH P
Sbjct: 69 SVVGLVIIV--GLLVFVCRKKYYYIVNRTKVQEEVEMKSHAYENP 111
>SB_26686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 108 GLLSTAITVIFFDGCHLSSTGLI 40
GL++ A+T FFDGC + +I
Sbjct: 334 GLIAYAVTFGFFDGCFVGQVAVI 356
>SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +2
Query: 89 IAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREERRLSSPRK 268
+ RRP D P+ S + SC++ ++ KKK+ E+ + RK
Sbjct: 163 VRFSRRPSQQMSGDDRGRPPHGSLGSRSCDLEKVKRLKKKKKKKKKKKEEEDEKEDKQRK 222
Query: 269 KELEK 283
++ EK
Sbjct: 223 EKTEK 227
>SB_59583| Best HMM Match : CSE2 (HMM E-Value=5.4)
Length = 175
Score = 26.2 bits (55), Expect = 4.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 200 RRSLTSKKKQACREERRLSSPRKK 271
+R ++ KKQ CR ++R+S +K+
Sbjct: 96 KRRISRNKKQICRNKKRISRNKKQ 119
>SB_46038| Best HMM Match : TRI5 (HMM E-Value=3.5)
Length = 541
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 182 YGSVEERRSLTSKKKQACREERRLSSPRKKELEKR 286
YGS E S +KK + +R++ P+KK KR
Sbjct: 80 YGSRIESLSFAYRKKPQRKLKRKVELPKKKTTPKR 114
>SB_36313| Best HMM Match : Crl (HMM E-Value=5.1)
Length = 442
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 218 KKKQACREERRLSSPRKKELEKRG 289
+ K AC +R+ + P +E EKRG
Sbjct: 52 RAKTACSSKRKQAGPEGRENEKRG 75
>SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024)
Length = 1213
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 177 KSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
K +KK+ + +KK KED + RG+ KK++
Sbjct: 1021 KGAKKNKKKKKDQKKKGGDGGDKEDKKKRGKSGEKKDE 1058
>SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 16 EDELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERRYDGVL 144
+DE K ED+ A DD + + +N E GVL
Sbjct: 145 DDETKHEDFNASEEHSLKTNNDDSKDKTGRKSNQEAPASQGVL 187
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 194 EERRSLTSKKKQACREERRLSSPRKKELEKR 286
EE+R + K+ EE RL R+KE E++
Sbjct: 390 EEKRKREGEVKKRKEEEERLVEARRKEQEEK 420
>SB_19753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 19 DELKKEDYQACGRKMTTVEEDDCNRRRKK 105
DELK DY R T ED N R +K
Sbjct: 35 DELKGIDYAKTNRSFTVATEDAENHRGEK 63
>SB_1134| Best HMM Match : DMAP_binding (HMM E-Value=6.4)
Length = 422
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 182 YGSVEERRSLTSKKKQACREERRLSSPRKKELEKR 286
YGS E S +KK + +R++ P+KK KR
Sbjct: 55 YGSRIESLSFAYRKKPQRKLKRKVELPKKKTTPKR 89
>SB_49770| Best HMM Match : SURF6 (HMM E-Value=0.92)
Length = 270
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 213 PRKKNKHAAKKEDYQARGRRSWKKE 287
P+KK+KH KK + G KKE
Sbjct: 43 PKKKHKHKHKKHKRKREGDEHGKKE 67
>SB_41189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 191 VEERRSLTSKKKQACREERRLSSPRKKELEKRG 289
++ER+ KK EE+R KK+ EK G
Sbjct: 38 IDERKEKDIKKAMETAEEKRARRLAKKKREKHG 70
>SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45)
Length = 1091
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 31 KEDYQACGRKMTTVEEDDCNRRRKK 105
+E Y+ G K+ VE+ + RRRKK
Sbjct: 723 RESYEDLGGKVEFVEKKEGKRRRKK 747
>SB_30819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 1 ARGPAEDELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEER 126
AR PAE +L+ + A ++ E D+ RRR+ +++ EE+
Sbjct: 114 ARSPAERDLRLQRLLAETERIER-ERDEMERRRRLSSDEEEK 154
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 185 GSVEERRSLTSKKKQACREER-RLSSPRKK 271
G+ E+ + + K+AC +ER RL+ RK+
Sbjct: 146 GATEQGKEAIEQGKEACEQERERLNKERKR 175
>SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45)
Length = 1102
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/35 (25%), Positives = 23/35 (65%)
Frame = +2
Query: 182 YGSVEERRSLTSKKKQACREERRLSSPRKKELEKR 286
+G + R+ + SKKK+ +++++ +KK+ +K+
Sbjct: 360 FGELRIRKPVRSKKKKKKKKKKKKKKKKKKKKKKK 394
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 25.4 bits (53), Expect = 8.0
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +2
Query: 14 RKMS*KKRTIKPVEER*QPSKKMTVIAVERRPLTSKKEDM--MVCWPNDSSAAASCEVYG 187
R+ S KK+T K + Q K R+ TSK +D P +S +
Sbjct: 85 RQASCKKKTSKNKPSKLQDQAKQDARQASRKTKTSKPQDQDKQAARPRQASRKPQDKQAA 144
Query: 188 SVEERRSLTSKKKQACREERRLSSPRKKE 274
S R++ + KQA R+ R + K +
Sbjct: 145 S---RKTSKPQDKQAARQPSRKTKTSKPQ 170
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 194 EERRSLTSKKKQACREERRLSSPRKKELEKR 286
EE R L ++K+ EERRL+ R+ E E+R
Sbjct: 1090 EEVRRLEEERKR--EEERRLAEQRRVEEERR 1118
>SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1358
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/35 (25%), Positives = 23/35 (65%)
Frame = +2
Query: 182 YGSVEERRSLTSKKKQACREERRLSSPRKKELEKR 286
+G + R+ + SKKK+ +++++ +KK+ +K+
Sbjct: 55 FGELRIRKPVRSKKKKKKKKKKKKKKKKKKKKKKK 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,792,325
Number of Sequences: 59808
Number of extensions: 164939
Number of successful extensions: 777
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 16,821,457
effective HSP length: 70
effective length of database: 12,634,897
effective search space used: 328507322
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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