Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G13
(290 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 29 0.56
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 29 0.56
Z81521-5|CAE17802.1| 657|Caenorhabditis elegans Hypothetical pr... 29 0.73
Z82276-4|CAB05241.3| 327|Caenorhabditis elegans Hypothetical pr... 28 0.97
Z81086-4|CAB03117.1| 342|Caenorhabditis elegans Hypothetical pr... 28 0.97
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 27 1.7
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 27 2.2
AC024817-28|AAY86305.1| 103|Caenorhabditis elegans Hypothetical... 27 2.2
Z73896-1|CAA98056.1| 240|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 26 3.9
Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical pr... 26 3.9
U97016-5|AAB52352.1| 196|Caenorhabditis elegans Hypothetical pr... 26 3.9
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 26 3.9
U56963-3|AAP31428.1| 312|Caenorhabditis elegans Serpentine rece... 26 3.9
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 26 3.9
AF125954-5|AAD14708.2| 338|Caenorhabditis elegans Seven tm rece... 26 3.9
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 26 3.9
AF040659-1|AAK39389.1| 332|Caenorhabditis elegans Hypothetical ... 26 3.9
AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class ho... 26 3.9
AC006769-6|AAF60582.1| 274|Caenorhabditis elegans Hypothetical ... 26 3.9
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 26 3.9
AC006603-3|AAF39750.1| 204|Caenorhabditis elegans Hypothetical ... 26 3.9
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 26 5.2
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 26 5.2
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 25 6.8
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 25 6.8
U13646-4|AAC24420.1| 211|Caenorhabditis elegans Hypothetical pr... 25 6.8
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 25 6.8
AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical... 25 6.8
AC024765-8|AAF60530.1| 165|Caenorhabditis elegans Hypothetical ... 25 6.8
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z83120-3|CAB05587.1| 419|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z81136-4|CAI46577.1| 738|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 25 9.1
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 25 9.1
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 25 9.1
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 25 9.1
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 25 9.1
U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like... 25 9.1
U29378-7|AAA68722.2| 362|Caenorhabditis elegans Hypothetical pr... 25 9.1
U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein ... 25 9.1
AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 prote... 25 9.1
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 25 9.1
AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3 ... 25 9.1
AC084197-6|AAO38572.1| 328|Caenorhabditis elegans Serpentine re... 25 9.1
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 25 9.1
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 29.1 bits (62), Expect = 0.56
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 71 SKKMTVIAVERRPLTSKKEDMMVCWPND 154
S+KM +I +RR + SK+ DMM W +
Sbjct: 3096 SEKMVLIITDRRLVLSKRTDMMGVWQTE 3123
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 29.1 bits (62), Expect = 0.56
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 71 SKKMTVIAVERRPLTSKKEDMMVCWPND 154
S+KM +I +RR + SK+ DMM W +
Sbjct: 3123 SEKMVLIITDRRLVLSKRTDMMGVWQTE 3150
>Z81521-5|CAE17802.1| 657|Caenorhabditis elegans Hypothetical
protein F32A11.7 protein.
Length = 657
Score = 28.7 bits (61), Expect = 0.73
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 162 LQLLVKSTGVSKKEDRLPRKKNKHAAKKEDYQARG 266
L +V++TGV++ +R+ RK ++ K+D RG
Sbjct: 337 LDFIVEATGVNEAMERVERKIGEYRRLKDDAMGRG 371
>Z82276-4|CAB05241.3| 327|Caenorhabditis elegans Hypothetical
protein K03D3.4 protein.
Length = 327
Score = 28.3 bits (60), Expect = 0.97
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 161 QKSHLANTPSYLLSSRLVVFFLRRLQSSSSTVVIFLPQ 48
Q + L+N Y++ +VVFF + L +V IFL +
Sbjct: 215 QSAQLSNPQQYIMGQIIVVFFFKILMFIPDSVHIFLKE 252
>Z81086-4|CAB03117.1| 342|Caenorhabditis elegans Hypothetical
protein F53B6.4 protein.
Length = 342
Score = 28.3 bits (60), Expect = 0.97
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 158 SAAASCEVYGSVEERRSLTSKKKQACREERRLSSPRKKELEKRG 289
SAA S + S S K R+ RRL S +K++EK G
Sbjct: 158 SAATGVSDKQSNSSKSSRKSSKSSKSRKNRRLDSDAQKKMEKSG 201
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 27.5 bits (58), Expect = 1.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 192 SKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
SKK ++ + KN+ + K+ED + +S K ED
Sbjct: 92 SKKSEKKEKSKNEGSKKEEDKEKEKEKSNKAED 124
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 27.1 bits (57), Expect = 2.2
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = +1
Query: 16 EDELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERRYDGVLAK*LFCCSFL*SLRECR 195
ED ++E + V E++ RR++K EE++ L K RE
Sbjct: 164 EDAARREIEEKAEMDAKRVAEEEEERRKEKEKRREEKKKQKELLKEKERSERKEKERELE 223
Query: 196 RKKIAYLEKKTSMPRRKKTIKPAEEGVGKKR 288
R+K EK+ R K+ K E+ K++
Sbjct: 224 REKEKSREKEREKEREKEREKEREKEREKQK 254
>AC024817-28|AAY86305.1| 103|Caenorhabditis elegans Hypothetical
protein Y54G2A.49 protein.
Length = 103
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 147 QMTLLLQLLVKSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
++ L++ L S +K + + RK KH +++ +RG R ++ED
Sbjct: 13 ELLKLIEELSDSEKKTKMKKKKRRKTKKHRKRRKKKPSRGSRKRREED 60
>Z73896-1|CAA98056.1| 240|Caenorhabditis elegans Hypothetical
protein F09E8.1 protein.
Length = 240
Score = 26.6 bits (56), Expect = 3.0
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 7 GPAEDELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERRYDGVL-AK*LFCCS 168
G +E K+ Q C M CNR R T +LE RY G + FCC+
Sbjct: 44 GLSEKRCVKDTKQICIGGMPDTPVKPCNRSRDCTASLE--RYSGWCDLETKFCCN 96
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 22 ELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERRYDGVLA 147
++KKE + G EDDC++R K +N + + +L+
Sbjct: 12 DVKKEKNEETGIDEEKSSEDDCSKRSKVKSNPSKFSVNSILS 53
>Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical
protein ZK643.5 protein.
Length = 487
Score = 26.2 bits (55), Expect = 3.9
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 177 KSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
+S+ S + R RK+ + ++DY+ GRR +++D
Sbjct: 270 RSSSRSDRRRRDDRKRPREDRDRKDYRRDGRRDGRRDD 307
>U97016-5|AAB52352.1| 196|Caenorhabditis elegans Hypothetical
protein B0261.5 protein.
Length = 196
Score = 26.2 bits (55), Expect = 3.9
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +2
Query: 44 KPVEER*QPSKKMTVIA--VERRPLTSKK--EDMMVCWPNDSSAAASCEVYGSVEER--- 202
KP + + +PSK TV + + + SK+ +D +V E ++ ++
Sbjct: 29 KPSQSKKKPSKVSTVTSTTISQEKTNSKRGSKDAVVDVSKPGKLPTLGENNKNLSDKKSK 88
Query: 203 -RSLTSKKKQACREERRLSSPRKKELEKR 286
RSL ++K+ + E++ S RKK+ K+
Sbjct: 89 QRSLKAQKQDGLKMEKKASDKRKKKANKK 117
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 146 PNDSSAAASCEVYGSVEERRSLTSKKKQACREERRLSSPRKKELEK 283
P D A++ + EE++ K+++ EE++ +KK EK
Sbjct: 51 PTDFPPASAAPIAPKGEEKKEEEKKEEEKKEEEKKADDEKKKTEEK 96
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 165 QLLVKSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
+L VK T +K E + + + K KKE+ + + + KK+D
Sbjct: 109 KLSVKKTQETKSERKDKKDERKEDDKKEENKEKSKDEEKKKD 150
>U56963-3|AAP31428.1| 312|Caenorhabditis elegans Serpentine
receptor, class v protein28 protein.
Length = 312
Score = 26.2 bits (55), Expect = 3.9
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 257 LIVFFLRGMLVFFSR*AIF-FLR-HSRRLHKKLQQKSHLANTPSYLLSSRLVVF 102
LI+ L + S A+F FLR HS K LQ++ HLA LL + V+F
Sbjct: 181 LIIVALTCFICVLSYLALFLFLRKHSAGFSKNLQRELHLAFQVLALLCAFFVMF 234
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 203 RSLTSKKKQACREERRLSSPRKKELEKR 286
R LT + +Q RE+ L R +E+EKR
Sbjct: 524 RQLTMQHEQRVREQELLLQKRAEEIEKR 551
>AF125954-5|AAD14708.2| 338|Caenorhabditis elegans Seven tm
receptor protein 120 protein.
Length = 338
Score = 26.2 bits (55), Expect = 3.9
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -3
Query: 162 AEESFGQHTIISSFFEVSGLLSTAITVIFFDGCHLSSTGLIV 37
A FG + ++ + F + +L + V+ H+S TGL++
Sbjct: 33 ATRHFGSYKLLMASFSIFSILYALVEVLTQPIMHISGTGLML 74
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 194 EERRSLTSKKKQACREERRLSSPRKKELEKR 286
EE+ ++ KK Q + ER+ KKE EK+
Sbjct: 99 EEKDKISVKKTQETKSERKDKKDEKKEDEKK 129
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 165 QLLVKSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
++ VK T +K E + + + K KKE+ + + + KK+D
Sbjct: 103 KISVKKTQETKSERKDKKDEKKEDEKKEESKEKSKDEEKKKD 144
>AF040659-1|AAK39389.1| 332|Caenorhabditis elegans Hypothetical
protein ZK484.3 protein.
Length = 332
Score = 26.2 bits (55), Expect = 3.9
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +2
Query: 29 KKRTIKPVEER*QPSKKMTVIAVERRPLTS-KKEDMMVCWPNDSSAAASC--EVYGSVEE 199
KKRTI +ER K + A LTS KK + P+ SS A S + GS +
Sbjct: 99 KKRTIPSKKERDAERKALAAAAAAAATLTSMKKAPIKKSVPSTSSEADSTTPKKKGSAVK 158
Query: 200 RRSLTSK 220
+ +T K
Sbjct: 159 AKKVTIK 165
>AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class
homeodomain protein protein.
Length = 298
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 22 ELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERRYDGVLA 147
++KKE + G EDDC++R K +N + + +L+
Sbjct: 12 DVKKEKNEETGIDEEKSSEDDCSKRSKVKSNPSKFSVNSILS 53
>AC006769-6|AAF60582.1| 274|Caenorhabditis elegans Hypothetical
protein Y45G12C.6 protein.
Length = 274
Score = 26.2 bits (55), Expect = 3.9
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -3
Query: 162 AEESFGQHTIISSFFEVSGLLSTAITVIFFDGCHLSSTGLIV 37
A FG + ++ + F + +L + V+ H+S TGL++
Sbjct: 33 ATRHFGSYKLLMASFSIFSILYALVEVLTQPIMHISGTGLML 74
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 177 KSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
K + KK+++ +KK+K A KE + R RR +K++
Sbjct: 300 KKSKKDKKKEKKEKKKSKK-ANKEKEERRARREQRKKE 336
>AC006603-3|AAF39750.1| 204|Caenorhabditis elegans Hypothetical
protein B0524.5 protein.
Length = 204
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 152 DSSAAASCEVYGSVEERRSLT-SKKKQACREERRLSSPRKKELEKRG 289
+S A +CE E++R++ +KKK+ +E+ + KKEL+K G
Sbjct: 130 ESGEAEACE---KKEDKRNVEKNKKKEKESKEKSKNCYEKKELKKNG 173
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 177 KSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
K + SKK + R+K K++D + ++ KKED
Sbjct: 158 KKSSKSKKSKKSKREKKDEEKKEDDKKEDDKKDDKKED 195
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 195 KKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
KKE++ +K+ K KKED + ++ KK++
Sbjct: 93 KKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDE 124
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 195 KKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
K+E + +K+ K KKE+ + ++ KKED
Sbjct: 181 KEEKKEEKKEEKKEEKKEEEKKEEKKEEKKED 212
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 192 SKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
SKK ++ K + K++ ++ G++S KKE+
Sbjct: 56 SKKSEKKEEPKKEEEKKEKSKKSEGKKSDKKEE 88
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 195 KKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
KKE++ K++K KKE+ + ++ KK++
Sbjct: 89 KKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDE 120
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 101 RRPLTSKKEDMMVCWPNDSSAAASCEVYGSVE 196
R PL +K D+M+C A+ CE YG E
Sbjct: 515 RCPL-AKVGDVMICASGYQDASQCCEAYGVFE 545
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 101 RRPLTSKKEDMMVCWPNDSSAAASCEVYGSVE 196
R PL +K D+M+C A+ CE YG E
Sbjct: 517 RCPL-AKVGDVMICASGYQDASQCCEAYGVFE 547
>Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical
protein C26C6.3 protein.
Length = 617
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 83 TVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREE 244
T+I P+T ++ W S + +C G RS SKK + R+E
Sbjct: 493 TIITTTLAPITVDAPNVWADWGEWSMCSRTCGGCGIRSRVRSCRSKKCEGRRQE 546
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 16 EDELKKEDYQACGRKMTTVEEDDCNR 93
+D ++ D CGR+ E +CNR
Sbjct: 1048 DDSNRRVDESLCGREQKEATERECNR 1073
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 16 EDELKKEDYQACGRKMTTVEEDDCNR 93
+D ++ D CGR+ E +CNR
Sbjct: 1048 DDSNRRVDESLCGREQKEATERECNR 1073
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 195 KKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
KKE+ KK K K+ED + ++ KK+D
Sbjct: 137 KKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKD 168
>U13646-4|AAC24420.1| 211|Caenorhabditis elegans Hypothetical
protein ZK783.3 protein.
Length = 211
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 22 ELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERR 129
E+KKE+ + G K EE +R K T N++ +
Sbjct: 112 EIKKEELKEKGMKEEKKEEKKDSRSEKNTENMKHSK 147
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 177 KSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
K + SKK + R+K K++D + ++ KKED
Sbjct: 154 KKSSKSKKSKKSKREKKDEDKKEDDKKEDDKKDDKKED 191
>AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical
protein T08B2.11 protein.
Length = 416
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 147 QMTLLLQLLVKSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKK 284
Q L+ + S V KE + R+K K KKE Q + KK
Sbjct: 61 QANLIKDPVAMSPNVPVKEGKATRRKEKSIEKKEHEQPKTTHRKKK 106
>AC024765-8|AAF60530.1| 165|Caenorhabditis elegans Hypothetical
protein Y39A3CR.8 protein.
Length = 165
Score = 25.4 bits (53), Expect = 6.8
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +2
Query: 29 KKRTIKPVEER*QPSKKMTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRS 208
KK+ IK +++ KK V +VE+ T++ D P + A ++R
Sbjct: 55 KKKDIKKIDK--DADKKKVVKSVEK---TARMPDK----PETGNTATGNPEKRHKRKKRV 105
Query: 209 LTSKKKQA----CREERRLSSPRKKELEKRG 289
SK+++A +EE R + R+K+L +RG
Sbjct: 106 TKSKEQRAKSRESKEEERDKAKRRKKLVRRG 136
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 25.0 bits (52), Expect = 9.1
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 107 PLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREERR--LSSPRKKELE 280
P KKE+ + P ++ A + EE++ KK++ EE++ + KK+
Sbjct: 65 PEEKKKEEKVEKKPEENKEAEKKDEPKKEEEKKEEEKKKEEKKEEEKKEEVKEEEKKDDS 124
Query: 281 KR 286
KR
Sbjct: 125 KR 126
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 192 SKKEDRLPRKKNKHAAKKEDYQARGRRSWKK 284
SKK ++ +KKNK + K+ +R + KK
Sbjct: 212 SKKSKKIKKKKNKKSKDKKKSNSRKNKKNKK 242
>Z83120-3|CAB05587.1| 419|Caenorhabditis elegans Hypothetical
protein R06A4.4b protein.
Length = 419
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 208 RSSFFDTPVDFTRSCSRRVIWPTHHHIFFL 119
R S F D T++C RV+ + + IFFL
Sbjct: 212 RQSCFALLGDLTKACPERVLPQSSNFIFFL 241
>Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical
protein R06A4.4a protein.
Length = 883
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 208 RSSFFDTPVDFTRSCSRRVIWPTHHHIFFL 119
R S F D T++C RV+ + + IFFL
Sbjct: 676 RQSCFALLGDLTKACPERVLPQSSNFIFFL 705
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 143 WPNDSSAAASCEVYGSVEE-RRSLTSKKKQACRE 241
W N+ A + E YG+ E+ R L SK + C +
Sbjct: 1681 WMNEKRNALASEDYGNDEDAARKLLSKHRALCED 1714
>Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical
protein W02B8.4 protein.
Length = 733
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 162 LQLLVKSTGVSKKEDRLPRKKNKHAAKKEDYQARG 266
L LLV++TGV++ + K KK+D RG
Sbjct: 425 LDLLVEATGVAEAVEDAEHKLIDALRKKDDAMGRG 459
>Z81136-4|CAI46577.1| 738|Caenorhabditis elegans Hypothetical
protein W02B8.6 protein.
Length = 738
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 162 LQLLVKSTGVSKKEDRLPRKKNKHAAKKEDYQARG 266
L LLV++TGV++ + K KK+D RG
Sbjct: 418 LDLLVEATGVAEAVEDAEHKLIDAQRKKDDAMGRG 452
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 143 WPNDSSAAASCEVYGSVEE-RRSLTSKKKQACRE 241
W N+ A + E YG+ E+ R L SK + C +
Sbjct: 1681 WMNEKRNALASEDYGNDEDAARKLLSKHRALCED 1714
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 198 KEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
KE+R RK+ + A + ED + +R KKE
Sbjct: 799 KEERNKRKEMERAKRLEDERQERKREKKKE 828
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 198 KEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
KE+R RK+ + A + ED + +R KKE
Sbjct: 1090 KEERNKRKEMERAKRLEDERQERKREKKKE 1119
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 198 KEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
KE+R RK+ + A + ED + +R KKE
Sbjct: 1105 KEERNKRKEMERAKRLEDERQERKREKKKE 1134
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 198 KEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
KE+R RK+ + A + ED + +R KKE
Sbjct: 1105 KEERNKRKEMERAKRLEDERQERKREKKKE 1134
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 198 KEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
KE+R RK+ + A + ED + +R KKE
Sbjct: 799 KEERNKRKEMERAKRLEDERQERKREKKKE 828
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 198 KEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
KE+R RK+ + A + ED + +R KKE
Sbjct: 1090 KEERNKRKEMERAKRLEDERQERKREKKKE 1119
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 198 KEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
KE+R RK+ + A + ED + +R KKE
Sbjct: 1105 KEERNKRKEMERAKRLEDERQERKREKKKE 1134
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 198 KEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
KE+R RK+ + A + ED + +R KKE
Sbjct: 1105 KEERNKRKEMERAKRLEDERQERKREKKKE 1134
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 177 KSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
+ T SKK+ + P K+ + +KE + +G+ K +D
Sbjct: 1221 QETDGSKKDKKEPHKEKEKDKEKEKEEDKGKEKEKHKD 1258
>U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like
protein 3 protein.
Length = 208
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 199 KKIAYLEKKTSMPRRKKTIKPAEEGVGKK 285
KK+A K S P++ KPA++ V K
Sbjct: 179 KKVAKSPAKKSAPKKAAAAKPAKKAVAPK 207
>U29378-7|AAA68722.2| 362|Caenorhabditis elegans Hypothetical
protein F08C6.2a protein.
Length = 362
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 211 YLEKKTSMPRRKKTI-KPAEEGVGKKR 288
++ K+ MP+RK+T+ P EE V K+
Sbjct: 2 FIHKQEKMPQRKRTMDSPQEEDVEVKK 28
>U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein 756
protein.
Length = 425
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 155 SSAAASCEVYGSVEERRSLTSKKKQACREERRLSSPRKKELEKR 286
S+ A E+ E++R L KK++ +++RR +KE + R
Sbjct: 259 SNLRAKVEMTNQAEKQRLLEEKKRRREKKKRRREDRLRKEEQIR 302
>AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 protein
protein.
Length = 425
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 155 SSAAASCEVYGSVEERRSLTSKKKQACREERRLSSPRKKELEKR 286
S+ A E+ E++R L KK++ +++RR +KE + R
Sbjct: 259 SNLRAKVEMTNQAEKQRLLEEKKRRREKKKRRREDRLRKEEQIR 302
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 143 WPNDSSAAASCEVYGSVEE-RRSLTSKKKQACRE 241
W N+ A + E YG+ E+ R L SK + C +
Sbjct: 1681 WMNEKRNALASEDYGNDEDAARKLLSKHRALCED 1714
>AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3
protein.
Length = 208
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 199 KKIAYLEKKTSMPRRKKTIKPAEEGVGKK 285
KK+A K S P++ KPA++ V K
Sbjct: 179 KKVAKSPAKKSAPKKAAAAKPAKKAVAPK 207
>AC084197-6|AAO38572.1| 328|Caenorhabditis elegans Serpentine
receptor, class v protein25 protein.
Length = 328
Score = 25.0 bits (52), Expect = 9.1
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -1
Query: 257 LIVFFLRGMLVFFSR*AIF-FLR-HSRRLHKKLQQKSHLA 144
LIV L L S A+F F+R HS R+ K L ++ HLA
Sbjct: 186 LIVVGLTCALCSISYGALFLFIRKHSNRISKSLSREIHLA 225
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 189 VSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
V KKE++ +KK++ +K++ + ++ KK+D
Sbjct: 186 VEKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKKD 219
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 195 KKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
KK+++ KK K KK+D + + ++ K+D
Sbjct: 196 KKDEKKEEKKEKKEDKKKDEKKKDKKKEDKKD 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,682,187
Number of Sequences: 27780
Number of extensions: 129689
Number of successful extensions: 820
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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