Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G13
(290 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g36650.1 68418.m04383 hypothetical protein 32 0.076
At2g01100.3 68415.m00018 expressed protein 29 0.41
At2g01100.2 68415.m00017 expressed protein 29 0.41
At2g01100.1 68415.m00016 expressed protein 29 0.41
At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative simila... 29 0.71
At3g26420.1 68416.m03295 glycine-rich RNA-binding protein simila... 28 1.2
At1g76180.1 68414.m08846 dehydrin (ERD14) identical to SP|P42763... 28 1.2
At2g30230.1 68415.m03678 hypothetical protein 27 2.2
At1g67230.1 68414.m07652 expressed protein 27 2.2
At1g30950.1 68414.m03790 unusual floral organ (UFO) / F-box fami... 27 2.2
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 27 2.9
At5g32613.1 68418.m03881 zinc knuckle (CCHC-type) family protein... 26 3.8
At5g18000.1 68418.m02111 transcriptional factor B3 family protei... 26 3.8
At3g51910.1 68416.m05694 heat shock transcription factor family ... 26 3.8
At2g36360.1 68415.m04462 kelch repeat-containing protein low sim... 26 3.8
At1g75640.1 68414.m08788 leucine-rich repeat family protein / pr... 26 3.8
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 26 3.8
At5g25070.1 68418.m02971 expressed protein 26 5.0
At4g03550.1 68417.m00486 glycosyl transferase family 48 protein ... 26 5.0
At3g44500.1 68416.m04783 Ulp1 protease family protein similar to... 26 5.0
At5g51530.1 68418.m06390 ubiquitin carboxyl-terminal hydrolase-r... 25 6.6
At5g15440.1 68418.m01807 circadian clock coupling factor-related... 25 6.6
At4g24220.1 68417.m03476 expressed protein protein induced upon ... 25 6.6
At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containi... 25 6.6
At3g27460.1 68416.m03432 expressed protein 25 6.6
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 25 6.6
At1g24706.1 68414.m03104 expressed protein 25 6.6
At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC... 25 8.8
At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC... 25 8.8
At4g40020.1 68417.m05666 hypothetical protein 25 8.8
At4g25970.1 68417.m03737 phosphatidylserine decarboxylase, putat... 25 8.8
At3g58160.1 68416.m06485 myosin heavy chain, putative similar to... 25 8.8
At3g01300.1 68416.m00039 protein kinase, putative similar to pro... 25 8.8
At2g30390.1 68415.m03698 ferrochelatase II identical to Swiss-Pr... 25 8.8
At2g15560.1 68415.m01782 expressed protein contains Pfam profile... 25 8.8
>At5g36650.1 68418.m04383 hypothetical protein
Length = 158
Score = 31.9 bits (69), Expect = 0.076
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 107 PLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREERRLSSPRKKELEK 283
P K+ CW + AA G E RR L K + CR RR ++ +KK+L++
Sbjct: 19 PWRQKRSSRDCCWRRRVATAA-----GEEESRRLLEKKSRDDCR-RRRTATEKKKKLDR 71
>At2g01100.3 68415.m00018 expressed protein
Length = 247
Score = 29.5 bits (63), Expect = 0.41
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = +2
Query: 74 KKMTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREERRL 253
KK + E++ +K++ + W AAA+ + + +RS K+KQ E
Sbjct: 4 KKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSS 63
Query: 254 SSPRKKELEKR 286
S E+ ++
Sbjct: 64 ESDSSSEVRRK 74
>At2g01100.2 68415.m00017 expressed protein
Length = 247
Score = 29.5 bits (63), Expect = 0.41
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = +2
Query: 74 KKMTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREERRL 253
KK + E++ +K++ + W AAA+ + + +RS K+KQ E
Sbjct: 4 KKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSS 63
Query: 254 SSPRKKELEKR 286
S E+ ++
Sbjct: 64 ESDSSSEVRRK 74
>At2g01100.1 68415.m00016 expressed protein
Length = 247
Score = 29.5 bits (63), Expect = 0.41
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = +2
Query: 74 KKMTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRSLTSKKKQACREERRL 253
KK + E++ +K++ + W AAA+ + + +RS K+KQ E
Sbjct: 4 KKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSS 63
Query: 254 SSPRKKELEKR 286
S E+ ++
Sbjct: 64 ESDSSSEVRRK 74
>At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative similar
to p68 RNA helicase [Schizosaccharomyces pombe]
GI:173419
Length = 537
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 176 EVYGSVEERRSLTSKKKQACREERRLSSPRKKELEKR 286
EV VEE S KKK+ REE+ +KK++ ++
Sbjct: 47 EVTNGVEEELSNKEKKKKRKREEKESEKNKKKDVPEK 83
>At3g26420.1 68416.m03295 glycine-rich RNA-binding protein similar
to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotiana
sylvestris]; contains Pfam profile: PF00076 RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 245
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 177 KSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
K S K+DR K +++ AK++ Y A+ R K+D
Sbjct: 148 KDDRYSSKDDRYGAKDDRYGAKEDRYGAKDDRYSSKDD 185
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 192 SKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
S K+DR K +++ AK + Y A+ R K+D
Sbjct: 146 SSKDDRYSSKDDRYGAKDDRYGAKEDRYGAKDD 178
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 198 KEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
K+DR K++++ AK + Y ++ R K+D
Sbjct: 162 KDDRYGAKEDRYGAKDDRYSSKDDRYSSKDD 192
>At1g76180.1 68414.m08846 dehydrin (ERD14) identical to SP|P42763
Dehydrin ERD14 {Arabidopsis thaliana}
Length = 185
Score = 27.9 bits (59), Expect = 1.2
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +2
Query: 29 KKRTIKPVEER*QPSKKMTVIAVERRPLTSKKEDMMVCWPNDSSAAASCEVYGSVEERRS 208
KK KP E + V E P + + +DSS+++S E GS E+R
Sbjct: 37 KKDETKPEETPIASEFEQKVHISEPEPEVKHESLLEKLHRSDSSSSSSSEEEGSDGEKRK 96
Query: 209 LTSKKKQACREERRLSSPRKKELEK 283
+KK+ E +K +EK
Sbjct: 97 KKKEKKKPTTEVEVKEEEKKGFMEK 121
>At2g30230.1 68415.m03678 hypothetical protein
Length = 177
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 187 ECRRKKIAYLEKKTSMPRRKKTIKPAEEGVGKK 285
E +R I +L TSMP +KKT K E KK
Sbjct: 71 ELKRGSIYFLIPDTSMPEKKKTKKRKELRCRKK 103
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 189 VSKKEDRLPRKKNKHAAKKEDYQAR 263
V+K+E L RK KH K+ D+ R
Sbjct: 392 VAKREQALDRKLEKHKEKENDFDLR 416
>At1g30950.1 68414.m03790 unusual floral organ (UFO) / F-box family
protein (FBX1) E3 ubiquitin ligase SCF complex F-box
subunit; almost identical to unusual floral organs
(UFO)GI:4376159 from [Arabidopsis thaliana]
Landsberg-erecta; one amino acid difference
Length = 442
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 285 LFSNSFFRGLDSLLSSRHACFFF 217
LFSN+F LL RH CF F
Sbjct: 81 LFSNTFLETYLQLLPLRHNCFLF 103
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 13 AEDELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERRYDGVL 144
AED+ QA + ED+ R+R +T N +RR++ L
Sbjct: 134 AEDQRNLVQQQAQAKAQNLRYEDELARKRMQTDNEAQRRHNAEL 177
>At5g32613.1 68418.m03881 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 457
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 107 PLTSKKEDMMVC-WPNDSSAAASCEVYGSVEERRSLTSKKKQACREER 247
P SK+ ++V P A + S+E++++ T++ K CR R
Sbjct: 343 PSGSKEVQILVISLPTSQEAQRGIMLESSIEDQKTTTTQAKSKCRRSR 390
>At5g18000.1 68418.m02111 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 307
Score = 26.2 bits (55), Expect = 3.8
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 119 KKEDMMVCWPNDSSAAASC--EVYGSVEERRSLTSKKKQACREERRLSSPRKK 271
KKE+ + W S G + +++ L +KK+A + E+ +S +KK
Sbjct: 146 KKEEEIESWSESSHPCHKTAESTSGRLTQKQELNLRKKEADKTEKSKTSKKKK 198
>At3g51910.1 68416.m05694 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 272
Score = 26.2 bits (55), Expect = 3.8
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 55 RKMTTVEEDDCNRRRKKTTNLEERRYDGVLAK*LFCCSFL*SLRECRRKKIAYLEKKTSM 234
++ TT +R + T ++R+ LA+ + SFL L + R KKI LE S
Sbjct: 153 QQQTTKSYIKAMEQRIEGTERKQRQMMSFLARAMQSPSFLHQLLKQRDKKIKELEDNESA 212
Query: 235 PRRKKTIKPAE 267
R++ + +E
Sbjct: 213 KRKRGSSSMSE 223
>At2g36360.1 68415.m04462 kelch repeat-containing protein low
similarity to rngB protein, Dictyostelium discoideum,
PIR:S68824; contains Pfam profile PF01344: Kelch motif
Length = 496
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 191 VEERRSLTSKKKQACREERRLSSPRKKELEKRG 289
V+ER S+ QA R+ + S+PR +L++ G
Sbjct: 403 VDERASMIQMAAQALRQHWKQSTPRTLQLKELG 435
>At1g75640.1 68414.m08788 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 1140
Score = 26.2 bits (55), Expect = 3.8
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 49 CGRKMTTVEEDDCNRRRKKTTNLEERRYDGVLAK*LFCCSFL*SLRECRRK-KIAYLEKK 225
CG+ + + RRR+K L G L L CC ++ SL + R K ++ K
Sbjct: 735 CGKPLGIECPNVRRRRRRKLILLVTLAVAGALLLLLCCCGYVFSLWKWRNKLRLGLSRDK 794
Query: 226 TSMPRR 243
P R
Sbjct: 795 KGTPSR 800
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 26.2 bits (55), Expect = 3.8
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 29 KKRTIKPVEER*QPSKKMTVIAVERRPLTSKKEDMMVCWPN-DSSAAASCEVYGSVEERR 205
K +TIK E+ Q +K +++E++ L S KE + + A + +EE
Sbjct: 449 KLKTIKEREKIIQAEEKR--LSLEKQQLLSDKESLEDLQQEIEKIRAEMTKKEEMIEEEC 506
Query: 206 SLTSKKKQACREERRLSSPRKKELEK 283
KK+ E RL S K ++EK
Sbjct: 507 KSLEIKKEEREEYLRLQSELKSQIEK 532
>At5g25070.1 68418.m02971 expressed protein
Length = 736
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 170 SCEVYGSVEERRSLTSKKKQACREERRLSSPRKKELEKR 286
S ++ SV R +KK+ E RL+S +ELEK+
Sbjct: 203 SRDLAASVTSARKNAIRKKRQASENLRLASTTHEELEKQ 241
>At4g03550.1 68417.m00486 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1780
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 200 FLRHSRRLHKKLQQKSHLANTPSYLLSSRLVVFFLRRL 87
F R RRLH L + + + P L + R + FF L
Sbjct: 857 FYRQVRRLHTILTSRDSMHSVPVNLEARRRIAFFSNSL 894
>At3g44500.1 68416.m04783 Ulp1 protease family protein similar to
At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
At2g14130, At2g15190, At3g47260, At5g34900, At3g29210,
At2g02210, At3g32900
Length = 805
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +3
Query: 138 CVGQMTLLLQLLVKSTGVSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
C+ + L+ +L+ G ++++P + +HA+ E Y A+ ++W KE
Sbjct: 172 CLAAVVLIEGILLTPYG----KEKIPLPRLQHASDFEMYTAQPWKTWAKE 217
>At5g51530.1 68418.m06390 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1149
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 194 EERRSLTSKKKQACREERRLSSPRKKELE 280
EE++S + KKK R LS+P K +E
Sbjct: 713 EEKKSRSKKKKNNKRNSTSLSTPLDKTVE 741
>At5g15440.1 68418.m01807 circadian clock coupling factor-related
similar to circadian clock coupling factor ZGT
[Nicotiana tabacum] GI:14210079
Length = 293
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 189 VSKKEDRLPRKKNKHAAKKED 251
+S ED +P + N H KK+D
Sbjct: 239 LSDSEDAIPSEDNNHTEKKQD 259
>At4g24220.1 68417.m03476 expressed protein protein induced upon
wounding - Arabidopsis thaliana, PID:e257749
Length = 388
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 107 PLTSKKEDMMVCWPNDSSAAASCEVYGSV 193
PLT V W N S + +CE GS+
Sbjct: 94 PLTDVTHVFYVTWTNRESESENCEANGSM 122
>At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1184
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 16 EDELKKEDYQACGRKMTTVEEDDCNRRRKKTTNLEERRYD 135
EDE+++E Y G + +ED+ + + ++T + E D
Sbjct: 1038 EDEVEEEKYLDDGEGVGEEDEDEADLKAEETVDASEATVD 1077
>At3g27460.1 68416.m03432 expressed protein
Length = 270
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -1
Query: 182 RLHKKLQQKSHLANTPSYLLSSRLVVFFLRRLQSSSSTVVI 60
++HKKLQ + P + S+L +++ + S S V +
Sbjct: 33 KMHKKLQATPEIVEKPGDISLSKLKNLYIQAKELSESEVTV 73
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 27 EKRGLSSLWKKDDN 68
EKR + S WKKDDN
Sbjct: 35 EKRWVKSDWKKDDN 48
>At1g24706.1 68414.m03104 expressed protein
Length = 1781
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 195 KKEDRLPRKKNKHAAKKEDYQARGRRSWKKE 287
++E R++ K KED++A RR K+E
Sbjct: 1661 EREREREREREKSLPLKEDFEASKRRKLKRE 1691
>At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 192 SKKEDRLPRKKNKHAAKKEDYQARGR-RSWKKED 290
S + R PR++++ +++DY+ R R RS+ + +
Sbjct: 138 SPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRE 171
>At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 192 SKKEDRLPRKKNKHAAKKEDYQARGR-RSWKKED 290
S + R PR++++ +++DY+ R R RS+ + +
Sbjct: 138 SPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRE 171
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 25.0 bits (52), Expect = 8.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 189 VSKKEDRLPRKKNKHAAKKEDYQARGRRSWKKED 290
+ +KE + +K+NK KKE + + S KKED
Sbjct: 398 IEEKEKKEEKKENK-KEKKESKKEKKEHSEKKED 430
>At4g25970.1 68417.m03737 phosphatidylserine decarboxylase, putative
similar to SP|P53037 Phosphatidylserine decarboxylase
proenzyme 2 precursor (EC 4.1.1.65) {Saccharomyces
cerevisiae}; contains Pfam profile PF02666:
phosphatidylserine decarboxylase
Length = 635
Score = 25.0 bits (52), Expect = 8.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 194 EERRSLTSKKKQACREERRLSSP 262
E RRS KK Q R RRLS P
Sbjct: 11 ESRRSKMRKKIQNFRSRRRLSRP 33
>At3g58160.1 68416.m06485 myosin heavy chain, putative similar to
myosin heavy chain [Arabidopsis thaliana]
gi|602328|emb|CAA84067.
Length = 1242
Score = 25.0 bits (52), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 191 VEERRSLTSKKKQACREERRLSSPRKKELEK 283
VE++R+ S++K C E R L R+K LE+
Sbjct: 1098 VEKQRADISERK--CAEARELGERRRKRLEE 1126
>At3g01300.1 68416.m00039 protein kinase, putative similar to
protein kinase APK1A [Arabidopsis thaliana]
Swiss-Prot:Q06548
Length = 490
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 195 KKEDRLPRKKNKHAAKKEDYQARGRRSWKK 284
KK+ + RKKN + E Y+ W K
Sbjct: 22 KKKKKRRRKKNNNVRNSEHYEEEANGCWVK 51
>At2g30390.1 68415.m03698 ferrochelatase II identical to
Swiss-Prot:O04921 ferrochelatase II, chloroplast
precursor (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme
synthetase) [Arabidopsis thaliana]
Length = 512
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 144 QHTIISSFFEVSGLLSTAITVIFFDGCHLSSTGLIVLFF 28
QHT+I S+++ G + +I + S +V+FF
Sbjct: 254 QHTVIPSWYQREGYIKAMANLIQSELGKFGSPNQVVIFF 292
>At2g15560.1 68415.m01782 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 489
Score = 25.0 bits (52), Expect = 8.8
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 131 MMVCWPNDSSAAASCEVYGSVE 196
+M CWP++S + +C G +E
Sbjct: 265 VMSCWPSNSGESMACPPSGHLE 286
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,336,097
Number of Sequences: 28952
Number of extensions: 119112
Number of successful extensions: 572
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,070,560
effective HSP length: 69
effective length of database: 10,072,872
effective search space used: 271967544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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