Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G12
         (353 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   0.70 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   2.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   2.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   2.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   3.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   3.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   6.5  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 0.70
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 352 FVCLYPFPVSVGSNG 308
           F+CL+P  +++  NG
Sbjct: 32  FICLFPITINIRKNG 46


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 123 FTLFIRLQITIFFSILNNY 67
           F + + L+I   F+ILNNY
Sbjct: 171 FMMLLMLEIWRRFTILNNY 189


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 123 FTLFIRLQITIFFSILNNY 67
           F + + L+I   F+ILNNY
Sbjct: 167 FMMLLMLEIWRRFTILNNY 185


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 294 NKDLPPLLPTDTGKGYKQTK 353
           NK  PPL     GKG+   K
Sbjct: 49  NKSPPPLADAAVGKGFHPWK 68


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 165 QAVLYPVYQEYL 130
           QA++YP+ QE L
Sbjct: 557 QAIIYPIIQEKL 568


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 109 NK*SESWQIFLIYWI*NSLVQLKSVGTVLYMAIKTKR 219
           +K S+  + FLI+W    L+  K +   L + +   R
Sbjct: 154 SKKSKQVEYFLIHWYPRMLISTKLLAHFLILTVLKAR 190


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 109 NK*SESWQIFLIYWI*NSLVQLKSVGTVLYMAIKTKR 219
           +K S+  + FLI+W    L+  K +   L + +   R
Sbjct: 154 SKKSKQVEYFLIHWYPRMLISTKLLAHFLILTVLKAR 190


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -1

Query: 245 FNSFRLHILLFVFIAMYNTVPTDFSCTRLFYIQYI 141
           F  F +H+LL V I  +  +   F C  + +  ++
Sbjct: 245 FILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHL 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,919
Number of Sequences: 336
Number of extensions: 1955
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)