Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G12
(353 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058649-1|AAL13878.1| 433|Drosophila melanogaster LD35228p pro... 79 2e-15
AE013599-3054|AAF57436.1| 433|Drosophila melanogaster CG11132-P... 79 2e-15
Y18197-1|CAB62169.1| 682|Drosophila melanogaster ARALAR 1 prote... 27 5.2
BT012316-1|AAS77441.1| 169|Drosophila melanogaster LP04080p pro... 27 5.2
AY058654-1|AAL13883.1| 682|Drosophila melanogaster LD35441p pro... 27 5.2
AE014297-4598|AAN14230.1| 682|Drosophila melanogaster CG2139-PD... 27 5.2
AE014297-4597|AAF57049.1| 682|Drosophila melanogaster CG2139-PA... 27 5.2
AE014297-4596|AAF57050.3| 679|Drosophila melanogaster CG2139-PB... 27 5.2
AE014297-4595|AAF57048.1| 695|Drosophila melanogaster CG2139-PC... 27 5.2
AY070815-1|AAL48437.1| 182|Drosophila melanogaster AT24358p pro... 27 6.9
AE013599-3253|AAF46750.2| 182|Drosophila melanogaster CG15676-P... 27 6.9
Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subuni... 27 9.1
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 27 9.1
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 27 9.1
AE013599-1910|AAF58234.1| 1642|Drosophila melanogaster CG10122-P... 27 9.1
>AY058649-1|AAL13878.1| 433|Drosophila melanogaster LD35228p
protein.
Length = 433
Score = 78.6 bits (185), Expect = 2e-15
Identities = 41/71 (57%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Frame = +3
Query: 156 EQPGTTEISRDSIIHGDKNKKKYVQTK-AVKRPEGMHREVFALLYNDNKDLPPLLPTDT- 329
E+ T E++RDS + K+ + +TK A +RPEGMHREVFALLY D KD PPLLPTDT
Sbjct: 12 ERANTPEVTRDSFLA--TKKRNFERTKTASRRPEGMHREVFALLYTDKKDAPPLLPTDTA 69
Query: 330 ---GKGYKQTK 353
G GYK+TK
Sbjct: 70 LGIGAGYKETK 80
>AE013599-3054|AAF57436.1| 433|Drosophila melanogaster CG11132-PA
protein.
Length = 433
Score = 78.6 bits (185), Expect = 2e-15
Identities = 41/71 (57%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Frame = +3
Query: 156 EQPGTTEISRDSIIHGDKNKKKYVQTK-AVKRPEGMHREVFALLYNDNKDLPPLLPTDT- 329
E+ T E++RDS + K+ + +TK A +RPEGMHREVFALLY D KD PPLLPTDT
Sbjct: 12 ERANTPEVTRDSFLA--TKKRNFERTKTASRRPEGMHREVFALLYTDKKDAPPLLPTDTA 69
Query: 330 ---GKGYKQTK 353
G GYK+TK
Sbjct: 70 LGIGAGYKETK 80
>Y18197-1|CAB62169.1| 682|Drosophila melanogaster ARALAR 1 protein
protein.
Length = 682
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 238 LLKGRRGCIERFLPFYTMIIKIYLHCYQLTQERD 339
L KG R C+ R +PF + Y H + ++D
Sbjct: 482 LYKGARACLLRDVPFSAIYFPTYAHTKAMMADKD 515
>BT012316-1|AAS77441.1| 169|Drosophila melanogaster LP04080p
protein.
Length = 169
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 207 KNKKKYVQTKAVKRPEGMHREVFALLYNDNKDLPPL 314
K KKK + K K+ + E F + Y D +D+PPL
Sbjct: 15 KKKKKKKKKKKKKKKKKKKTETFVIPY-DMRDMPPL 49
>AY058654-1|AAL13883.1| 682|Drosophila melanogaster LD35441p
protein.
Length = 682
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 238 LLKGRRGCIERFLPFYTMIIKIYLHCYQLTQERD 339
L KG R C+ R +PF + Y H + ++D
Sbjct: 482 LYKGARACLLRDVPFSAIYFPTYAHTKAMMADKD 515
>AE014297-4598|AAN14230.1| 682|Drosophila melanogaster CG2139-PD,
isoform D protein.
Length = 682
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 238 LLKGRRGCIERFLPFYTMIIKIYLHCYQLTQERD 339
L KG R C+ R +PF + Y H + ++D
Sbjct: 482 LYKGARACLLRDVPFSAIYFPTYAHTKAMMADKD 515
>AE014297-4597|AAF57049.1| 682|Drosophila melanogaster CG2139-PA,
isoform A protein.
Length = 682
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 238 LLKGRRGCIERFLPFYTMIIKIYLHCYQLTQERD 339
L KG R C+ R +PF + Y H + ++D
Sbjct: 482 LYKGARACLLRDVPFSAIYFPTYAHTKAMMADKD 515
>AE014297-4596|AAF57050.3| 679|Drosophila melanogaster CG2139-PB,
isoform B protein.
Length = 679
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 238 LLKGRRGCIERFLPFYTMIIKIYLHCYQLTQERD 339
L KG R C+ R +PF + Y H + ++D
Sbjct: 479 LYKGARACLLRDVPFSAIYFPTYAHTKAMMADKD 512
>AE014297-4595|AAF57048.1| 695|Drosophila melanogaster CG2139-PC,
isoform C protein.
Length = 695
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 238 LLKGRRGCIERFLPFYTMIIKIYLHCYQLTQERD 339
L KG R C+ R +PF + Y H + ++D
Sbjct: 495 LYKGARACLLRDVPFSAIYFPTYAHTKAMMADKD 528
>AY070815-1|AAL48437.1| 182|Drosophila melanogaster AT24358p
protein.
Length = 182
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 197 YNTVPTDFSCTRLFYIQY 144
Y+TVP RLFY+QY
Sbjct: 41 YSTVPAALKMQRLFYVQY 58
>AE013599-3253|AAF46750.2| 182|Drosophila melanogaster CG15676-PA
protein.
Length = 182
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 197 YNTVPTDFSCTRLFYIQY 144
Y+TVP RLFY+QY
Sbjct: 41 YSTVPAALKMQRLFYVQY 58
>Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subunit
of RNA polymeraseI (A) protein.
Length = 1644
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 304 KSLLSLYRRAKTSRCIPSGLLTAF 233
KSLL Y S C+P GL+T F
Sbjct: 845 KSLLDGYTNDINSTCLPRGLITKF 868
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 328 VSVGSNGGKSLLSLYRRAKTSRCIPS 251
++ SN + S+Y TS+CIPS
Sbjct: 102 INTDSNSSLKIYSIYFAGNTSKCIPS 127
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 328 VSVGSNGGKSLLSLYRRAKTSRCIPS 251
++ SN + S+Y TS+CIPS
Sbjct: 50 INTDSNSSLKIYSIYFAGNTSKCIPS 75
>AE013599-1910|AAF58234.1| 1642|Drosophila melanogaster CG10122-PA
protein.
Length = 1642
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 304 KSLLSLYRRAKTSRCIPSGLLTAF 233
KSLL Y S C+P GL+T F
Sbjct: 844 KSLLDGYTNDINSTCLPRGLITKF 867
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,546,416
Number of Sequences: 53049
Number of extensions: 284790
Number of successful extensions: 803
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -