Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G11
         (347 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   1.1  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   4.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   7.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   7.5  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
 Frame = -2

Query: 190  WRSQQHVR------LQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQRIHQRR 47
            W + +H R      L  P+   R     GPS+ S D   S+   STS +  + R
Sbjct: 1368 WNANRHNRQSKADSLDSPKKHRRNGSCPGPSNESTDGGESMGTASTSSQTDEPR 1421



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 124  GPSHGSDDYSPSISLGSTSQRIHQRRSAFCVSKL 23
            GP+H S       S GSTS + ++    F  ++L
Sbjct: 1525 GPNHSSPSNHTDDSSGSTSAKQYRDLETFQKAQL 1558


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = -1

Query: 212 APQTTYILEESAARPVAGSTSAITSCTDAWSFAWIRRLLAEHFLGQYK--STNSPASFCI 39
           +P   Y    S+   +    + I+SC +  ++ ++ R   + FLG +       P   C 
Sbjct: 492 SPTFVYQYVNSSGIALVQLMAYISSCCNPITYCFMNRRFRQAFLGVFSCYRNRMPICCCF 551

Query: 38  LC 33
            C
Sbjct: 552 CC 553


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 66   NEFTSVVLHFVYLSSTQIA 10
            NE    V+HF Y+S  ++A
Sbjct: 1956 NETLDRVIHFTYVSDDKVA 1974


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/36 (16%), Positives = 19/36 (52%)
 Frame = -3

Query: 213 GSTDHVHLGGVSSTSGCRVHVRYHELHRCVVLRMDQ 106
           G+ DH+ +  + +   C   ++ H++ R   + +++
Sbjct: 626 GTLDHIVVETIDTAKACIEFLKQHDIGRASFIALEK 661


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,230
Number of Sequences: 2352
Number of extensions: 7215
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)