Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G10
(498 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 33 0.024
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 0.51
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 29 0.51
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 29 0.51
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 28 0.68
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 28 0.90
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 27 1.2
SPAC17A2.02c |||DUF887 family protein|Schizosaccharomyces pombe|... 26 2.7
SPBC3H7.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 2.7
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 26 2.7
SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces pom... 26 3.6
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 26 3.6
SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2 |Schizosacc... 26 3.6
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 25 4.8
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 25 4.8
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 25 6.3
SPAC977.10 |sod2||CPA1 sodium ion/proton antiporter |Schizosacch... 25 6.3
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 25 6.3
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 25 8.4
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 25 8.4
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 25 8.4
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 33.1 bits (72), Expect = 0.024
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 264 FKKDIAEAVQQSCEKCTDAQKHIFKRFLEALKEKLPAEYEAFKNKYDP 407
FK DI+E + +S A H++ R EAL+ KLP E E F +K++P
Sbjct: 111 FKDDISEEMLKS------ALNHLYDRMTEALRFKLPEEDEVF-DKHEP 151
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 28.7 bits (61), Expect = 0.51
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 204 LEEFVKCFLDSVKCNPVAGDFKKDIAEAVQQSCEKCTDAQKHIFKRFLEALKEKLPAEYE 383
LEEF + LD V C+ V G+ D EAV+ ++ + +R E ++ + E
Sbjct: 229 LEEFYR-HLDFVSCSSVTGEGMDDFLEAVKAKVKEYEEEYVPEMERMKEIQRQTKERQKE 287
Query: 384 AFKNK 398
A +K
Sbjct: 288 AQLSK 292
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 28.7 bits (61), Expect = 0.51
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 208 KSSLNAFSIPSNVILWLEISKRILRRLYNNHAKSAQMPRNISSNVSLKL 354
K SL+AF +P+ ++ + R+L+ + + H KS M ++ISS + L
Sbjct: 295 KESLDAF-LPAFYDVYFQCRTRLLKPVLDYHLKSFFMEKSISSYIQKSL 342
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 28.7 bits (61), Expect = 0.51
Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 198 STLEEFVKCFLDSVKCNPVAGDFKKDIAEAVQQSCEKCTDAQK-HIFKRFLEALKEKL 368
ST+++F+ F + + + KKD+ +++SC+ ++ H++K+F + + L
Sbjct: 1279 STVDDFLFRFSKATEQCLMVKYIKKDLEIEIEESCDFSIQTEEIHLYKKFKDVISSNL 1336
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 28.3 bits (60), Expect = 0.68
Identities = 12/56 (21%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 282 EAVQQSCEKCTDAQKHIFKRFLEALKE--KLPAEYEAFKNKYDPEGKHFAALEAAV 443
++ +++C+ C K K+F EAL++ + A+ + +Y+ + H +E +
Sbjct: 206 DSSEEACKSCYTQAKTWEKKFREALRDSKEYAAQLQTIHEEYEQQQAHIVRMEELI 261
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 27.9 bits (59), Expect = 0.90
Identities = 30/108 (27%), Positives = 50/108 (46%)
Frame = -3
Query: 415 FPSGSYLFLNASYSAGNFSFKASRKRLKICFWASVHFSHDCCTASAISFLKSPATGLHLT 236
+P+G +N +Y A ++ I A+ S ++S+ S L S T +
Sbjct: 82 WPTGQGFQINMAYPGRPEQIYAQSQQFNIVEGAA---SSSSSSSSSSSSLVSSTTSSS-S 137
Query: 235 ESRKHLTNSSRVDWSLATASISKSSFSVVYFSLAYTLAKTTRHRT*MH 92
+ T+SS S +++S SKSS S S + + ++TT HRT H
Sbjct: 138 SATPSTTSSSSSSSSSSSSSSSKSSSSSSKSS-SRSSSRTTSHRTTSH 184
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 283 SAISFLKSPATGLHLTESRKHLTNSSRVDWSLATASISKSSFSVVYFSLAYTLAKTTR 110
S I L + + +HL + D +L T I K + S YFS T KT++
Sbjct: 133 SPIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGTLSSDYFSHPITSVKTSK 190
>SPAC17A2.02c |||DUF887 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 290
Score = 26.2 bits (55), Expect = 2.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -3
Query: 262 SPATGLHLTESRKHLTNSSRVDWSLATASISKSSFSVVYFSLAYTLAK 119
SP HL+ L+ +R++W A + S S+V L YT K
Sbjct: 57 SPVISRHLSTHYAKLSKKTRLNWD---AHVVSSVQSIVLICLGYTCLK 101
>SPBC3H7.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 287
Score = 26.2 bits (55), Expect = 2.7
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 205 LKSSLNAFSIPSNVILWLEISKRILRRLYNNHAKSAQMPRNISSNVSLKL*KKNCLRNMK 384
LKS + S SN L S R + + NH S +P N++ + S+ CL +
Sbjct: 159 LKSQNSIVSRTSNPFSCLNHSPRQIHKTVRNHLFSPPLPSNLALSFSISN-ASVCLHLFR 217
Query: 385 RSRTNTI 405
S N +
Sbjct: 218 LSGPNEV 224
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 26.2 bits (55), Expect = 2.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 268 KRILRRLYNNHAKSAQMPRNISS 336
++IL R +N H K+A PR +S+
Sbjct: 264 EKILLRWFNYHLKAANWPRTVSN 286
>SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 605
Score = 25.8 bits (54), Expect = 3.6
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 147 YTTENDDLDIEAVANDQSTLEEFVKCFLDSV 239
YTT+N+ +EAV ++ ++ +K ++ V
Sbjct: 253 YTTKNNKFSVEAVLLQSTSEDKVIKAYMSEV 283
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 25.8 bits (54), Expect = 3.6
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = -1
Query: 213 TLQELTGHWQQPQYLNHH--SQSYTSP*R-----THSPKPPDTERKCTSSLRVSRYLVM* 55
T E TG Q ++H S+S T P T S PP+ +R+ TSS SR L +
Sbjct: 457 TKSEKTGKSNSQQAPSNHVLSKSNTVPNLVTGFPTRSDNPPNEKRRRTSSSENSRALDIQ 516
Query: 54 VCNHTYHSP 28
+ HSP
Sbjct: 517 LSASDSHSP 525
>SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 25.8 bits (54), Expect = 3.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 315 DAQKHIFKRFLEALKEKLPAEYEAFKNKYDPEGK 416
D K I K+FL+ +K ++ ++ +YD +GK
Sbjct: 556 DTDKIIPKQFLKTIKRTGLGQFAFYEIRYDADGK 589
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 4.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 451 NLATAASSAAKCFPSGSYLFLNASYSAGNFSFKAS 347
N A++A+ AA PSGS +S ++ NF AS
Sbjct: 123 NTASSATGAATTNPSGSTFNFGSSNNSFNFGKPAS 157
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 25.4 bits (53), Expect = 4.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 306 KCTDAQKHIFKRFLEALKEKLPAEYEAFKNKYDPEGK 416
KC D K R K+ LP K Y PEGK
Sbjct: 447 KCEDINKLKQLRLALETKKDLPGTKVQLKPAYSPEGK 483
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 25.0 bits (52), Expect = 6.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 340 RLKICFWASVHFSHDCCTASAISFLKSPATGLHLTESRKHL 218
RL+I ++A H +A+SFL G E R+HL
Sbjct: 580 RLRIAYFAQHHVDTLDLNLNALSFLAKTFPGKGEEEYRRHL 620
>SPAC977.10 |sod2||CPA1 sodium ion/proton antiporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 25.0 bits (52), Expect = 6.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 120 LASVYAKEKYTTENDDLDIEAVANDQSTLEEFV 218
L S+Y K T + DL+++ + D+S E++V
Sbjct: 437 LKSLYLNRKVTKSDSDLELQVIGVDKSQ-EDYV 468
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.0 bits (52), Expect = 6.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 361 KNCLRNMKRSRTNTIPKENILPHWKLPLLNFKHI 462
K+ LR+++R +T P ++ L H K KHI
Sbjct: 306 KHVLRSLQRLSASTFPMKDYLVHCKSNQETAKHI 339
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 24.6 bits (51), Expect = 8.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +1
Query: 241 NVILWLEISKRILRRL 288
NV++W +S+++LRRL
Sbjct: 319 NVLVWDSVSRQVLRRL 334
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 485 NKEII-LFIICLKFSNGSFQCGKMFSFGIVFVL 390
++EI+ F +C KFS S + +FSF V+ L
Sbjct: 35 SQEILSFFFMCSKFSMNSLKFCVLFSFKTVYSL 67
>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 24.6 bits (51), Expect = 8.4
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 225 FLDSVKCNPVAGDFKKDIAEAVQQSCEKCTDAQKHIFKRFLE-ALKEKLPAEYEAFKNKY 401
F+D + AGD + + + +CEK + Q +++R E A K + E + +N
Sbjct: 8 FVDKIASIESAGDTLDRLPQLISLACEKGQETQ--VYERLNELASKSAIRVEQLSAENNQ 65
Query: 402 D 404
D
Sbjct: 66 D 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,081,667
Number of Sequences: 5004
Number of extensions: 41463
Number of successful extensions: 190
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 196153982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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