Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G09
         (494 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CC400 Cluster: hypothetical protein TTHERM_0013...    33   2.7  
UniRef50_A1H811 Cluster: Putative uncharacterized protein; n=1; ...    33   3.5  
UniRef50_Q8A690 Cluster: Putative uncharacterized protein; n=1; ...    32   6.1  
UniRef50_A3VIT4 Cluster: Probable flavin-binding monooxygenase; ...    32   6.1  

>UniRef50_UPI00006CC400 Cluster: hypothetical protein
           TTHERM_00133590; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00133590 - Tetrahymena
           thermophila SB210
          Length = 909

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = -2

Query: 247 TLIYVARDEKSVRSMTMNSFIIS*PFLQFHLQTIFYFFAILYNTLIKK*VKSNGAFSVIF 68
           T++ +A D+K    + +  F I     QF++Q  FY   + YN L K  +++      I+
Sbjct: 86  TVLCLALDKKISLKIKIQLFFIGHEKSQFYIQKKFYSDRLHYNILSKNYIRNQDGSQQIY 145

Query: 67  RDQKDHH 47
            ++K  H
Sbjct: 146 NEEKVRH 152


>UniRef50_A1H811 Cluster: Putative uncharacterized protein; n=1;
           Ralstonia pickettii 12J|Rep: Putative uncharacterized
           protein - Ralstonia pickettii 12J
          Length = 709

 Score = 33.1 bits (72), Expect = 3.5
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 240 INVRYHCGPPTTYYVIFHNLIH*SYVNSVLSHCLPKLFDTSRAAQI 377
           IN R   G   TY+ I H  +   Y   ++    PK++DT R  +I
Sbjct: 447 INARQRQGDNATYHFIDHQALAVRYTGRIIVDLFPKVYDTPRVMRI 492


>UniRef50_Q8A690 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides thetaiotaomicron|Rep: Putative
           uncharacterized protein - Bacteroides thetaiotaomicron
          Length = 194

 Score = 32.3 bits (70), Expect = 6.1
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = -3

Query: 459 FFMVNTLSLLYRSTVVVKLRPACGPRTVFVRPATYQTVLVDNDSKPSLHTISE 301
           FF+++ L  LY + +  K    CG R  +     Y   +++ D   ++  +SE
Sbjct: 55  FFLIDDLISLYNANIAKKYHEGCGDRKYYKLMYLYDVNMIETDMSDTVFPLSE 107


>UniRef50_A3VIT4 Cluster: Probable flavin-binding monooxygenase;
           n=1; Rhodobacterales bacterium HTCC2654|Rep: Probable
           flavin-binding monooxygenase - Rhodobacterales bacterium
           HTCC2654
          Length = 496

 Score = 32.3 bits (70), Expect = 6.1
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -1

Query: 440 YLYYIVVQWSSNCGPHVALERYLCGPRRIKQFW*TMTQNRVYIRLVNQVVKNDVIGCWRP 261
           Y +Y    WS+N  P   +  YL   R +   +  +T+  V+   ++Q   ND  GCWR 
Sbjct: 65  YSFYPGTSWSTNFAPGSEILAYL---RDLADRY-GVTRKTVFNTRISQATWNDDAGCWRV 120

Query: 260 T 258
           T
Sbjct: 121 T 121


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,446,794
Number of Sequences: 1657284
Number of extensions: 8654070
Number of successful extensions: 18535
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18532
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)