Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G09
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.5  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   4.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   4.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   6.1  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 173 VFAVSFANNFLFFRYFI*HFNQKISKIKRSI*RYFPRPKRSSPFFTKT*HIRMSPS 6
           +F++S A N   F     H    I  +     R  P PKRSSP   +   + +SP+
Sbjct: 47  LFSLSLAQNNQLFT----HHKAPIRPVALPPKREIPSPKRSSPILAE--KVSVSPT 96


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -1

Query: 425 VVQWSSNCGPHVALERYLCGPRRIKQFW*TMTQN 324
           ++ W+S+      +E+YL   R + Q W   + N
Sbjct: 434 IILWTSHLTQADVIEKYLSKARYVIQTWVPASDN 467


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 428 IVVQWSSNCGPHVALERYLCGPRRIKQFW 342
           +V+ WSSN      + +YL     + Q W
Sbjct: 451 LVIIWSSNLSKRPYIYKYLDKKNVVVQSW 479


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 380 RYLCGPRRIKQFW-*TMTQNRVYIRLVNQVVK 288
           +YLC PRRI+      +T+ ++ I   N+ +K
Sbjct: 108 KYLCRPRRIQMAQNLNLTERQIKIWFQNRRMK 139


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 380 RYLCGPRRIKQFW-*TMTQNRVYIRLVNQVVK 288
           +YLC PRRI+      +T+ ++ I   N+ +K
Sbjct: 128 KYLCRPRRIQMAQNLNLTERQIKIWFQNRRMK 159


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 380 RYLCGPRRIK 351
           +YLC PRRI+
Sbjct: 27  KYLCRPRRIE 36


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 380 RYLCGPRRIK 351
           +YLC PRRI+
Sbjct: 158 KYLCRPRRIE 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,227
Number of Sequences: 336
Number of extensions: 2500
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)