Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G09
         (494 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.4  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   4.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.7  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   7.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    22   10.0 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    22   10.0 
AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription fact...    22   10.0 

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 206 TTNTFLVTGHIDQCEIPLWASNNLLRH 286
           TT+  LV   +D C+I +  + N+L+H
Sbjct: 279 TTHAGLVDAMVDACDIVMQRAPNVLQH 305


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 230  GHIDQCEIPLWASNNLLRHFSQPDS 304
            G I Q E P WASN     ++ P +
Sbjct: 964  GAIKQNEFPSWASNKEYLAYNSPSA 988


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 226  DEKSVRSMTMNSFIIS*PFLQFHLQTI 146
            ++KS++S+   SF I  PF Q H  +I
Sbjct: 1752 EDKSIQSLPGKSFAIDGPFAQ-HFNSI 1777


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 378 VFVRPATYQTVLVDNDSKPSLHTI 307
           +F+R AT +  LVD  +  S+H I
Sbjct: 190 IFLRQATLEESLVDPKTGDSVHKI 213


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 342 VDNDSKPSLHTISESGCEK 286
           +D  SKPS  + S +GC++
Sbjct: 305 LDTKSKPSTSSSSGTGCDR 323


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 8/68 (11%)
 Frame = +2

Query: 164 LQKRSRNDKTVHRHTTNTFLVTGHIDQCEIPLWASNNLL---RHFS-----QPDSLIVCK 319
           +Q+     K        T   TG    C    + SN L    RH       +P   +VC+
Sbjct: 102 VQEEQEPAKKTQTRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCE 161

Query: 320 LGFESLST 343
            GF++L++
Sbjct: 162 RGFKTLAS 169


>AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription factor
           zen protein.
          Length = 52

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 380 RYLCGPRRIK 351
           RYLC PRRI+
Sbjct: 23  RYLCRPRRIE 32


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,600
Number of Sequences: 2352
Number of extensions: 11332
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)