Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G09
         (494 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    23   1.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.5  

>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 411 RPLYYDIIEIKCLP 452
           +PLYY+II I+ +P
Sbjct: 332 KPLYYNIINIEQIP 345


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 452 W*TLYLYYIVVQWSSNCGP 396
           W   +L Y++V +  +C P
Sbjct: 340 WLPFFLMYVIVPFCPDCCP 358


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 452 W*TLYLYYIVVQWSSNCGP 396
           W   +L Y++V +  +C P
Sbjct: 340 WLPFFLMYVIVPFCPDCCP 358


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 452 W*TLYLYYIVVQWSSNCGP 396
           W   +L Y++V +  +C P
Sbjct: 340 WLPFFLMYVIVPFCPDCCP 358


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 182 NDKTVHRHTTNTF 220
           +D++ HR T+NTF
Sbjct: 220 SDESFHRLTSNTF 232


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,397
Number of Sequences: 438
Number of extensions: 2804
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)