Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G07
(405 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0660 - 26005210-26006150,26006440-26006467,26007307-260078... 31 0.26
05_06_0153 - 26019377-26020813 31 0.46
07_01_0463 + 3502708-3503535 30 0.80
05_07_0326 + 29274287-29274428,29274577-29275379 29 1.8
12_01_1069 - 11060045-11060262,11060404-11060545,11060624-110607... 28 2.4
05_01_0579 - 5196888-5196970,5197063-5197621,5197704-5197786,519... 28 2.4
03_02_0314 + 7398247-7400877 28 2.4
02_04_0192 + 20795659-20796309 28 2.4
07_03_1348 + 25945444-25945551,25946411-25946607,25946732-259468... 28 3.2
01_06_1777 + 39818212-39819696 28 3.2
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 28 3.2
07_01_1103 + 10141766-10143583 27 4.3
02_04_0312 - 21942310-21943356 27 4.3
11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861 27 5.6
05_03_0251 + 10987441-10988961,10989731-10989823,10989937-10990053 27 5.6
04_01_0360 - 4720997-4721812 27 5.6
06_01_1000 - 7778907-7780721 27 7.5
03_02_0181 + 6214594-6214884 27 7.5
09_06_0150 - 21225086-21225511,21225775-21226125,21227180-212277... 26 9.9
09_01_0025 - 441528-444284 26 9.9
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 26 9.9
02_01_0035 - 220036-221419,222050-222801 26 9.9
01_04_0139 - 16570515-16571141 26 9.9
>11_06_0660 -
26005210-26006150,26006440-26006467,26007307-26007838,
26008863-26009008
Length = 548
Score = 31.5 bits (68), Expect = 0.26
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 199 WKKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPKETDYLW 330
WK++ C K+E+C+++ KNT +E + K T W
Sbjct: 419 WKEKKTEECVEEEKREECDQQERKNTEEDKEESEEDGKTTKQRW 462
>05_06_0153 - 26019377-26020813
Length = 478
Score = 30.7 bits (66), Expect = 0.46
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -1
Query: 306 WLQSSFFGGCSILHSSAIAVFFLPASSASLIVFFLPTPSSASLLVFFLPAPS 151
+L S F GG L ++V L + + +L PS+ASL FFL PS
Sbjct: 102 FLSSHFRGGIQALVVDMMSVEALDIAERLKVPGYLFHPSNASLFAFFLQIPS 153
>07_01_0463 + 3502708-3503535
Length = 275
Score = 29.9 bits (64), Expect = 0.80
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +2
Query: 5 EGASKKEDHLSRKKKTSVPXXXXXXXXXXXXGFQDCGRRSWKKKTIKSAEGAGRKKTNKL 184
E KKE + KKK G ++ G++ KKK E G+K+ K
Sbjct: 100 EEGKKKEKEMKEKKKDK--SDKKEEGKKKKDGDEEEGKKKEKKKDKDGDEKEGKKEKKKD 157
Query: 185 A---EEGVGRKKTIKLAEEAGRKKT 250
EE G+KK K ++ ++KT
Sbjct: 158 KDGDEEEEGKKKEKKKKDKGDKEKT 182
>05_07_0326 + 29274287-29274428,29274577-29275379
Length = 314
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 KKKTIKSAEGAGRKKTNKLAEEGVG-RKKTIKLAEEAGRKKTAIAEE*RILQPPKKEDCN 304
KK+ + E A +KK +L EE +KK + EEA KKT +E + K
Sbjct: 150 KKQQQEEEEEAAKKKQQQLQEEEEATKKKQQEEEEEAAAKKTKKLQEEEAIAKHKPATTT 209
Query: 305 HRRK 316
R++
Sbjct: 210 ERKQ 213
>12_01_1069 -
11060045-11060262,11060404-11060545,11060624-11060776,
11060942-11061013,11062774-11063082,11063323-11063378,
11066436-11066533,11066616-11066700,11066800-11067001,
11067471-11067542,11069555-11069624,11071829-11072038,
11072337-11072609,11073912-11074183,11075354-11075557
Length = 811
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 48 KQACRE-ERGLPGSGKKEGFKIAGEG 122
K+ C++ ERG PG+ KK+ K+A G
Sbjct: 235 KRKCQDGERGSPGTSKKKKLKVANTG 260
>05_01_0579 -
5196888-5196970,5197063-5197621,5197704-5197786,
5199165-5199279,5199376-5199473,5200136-5200183,
5200313-5200415,5201003-5201119,5201254-5201430,
5202563-5202593,5203492-5203604,5203824-5204036
Length = 579
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 345 HLANTP*IICFLRWLQSSFFGGCSILHSSAIAVFFLPASSA 223
H++ P ++ S C I H S + VFF P S A
Sbjct: 315 HISTAPLLMLDANLSPDSLEAACKIAHESGVPVFFEPVSLA 355
>03_02_0314 + 7398247-7400877
Length = 876
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -1
Query: 264 SSAIAVFFLPASSASLIVFFLPTPSSASLLVFFLPAPSAD 145
S+ +AV P+SS SL+VFF P+ +A + + P AD
Sbjct: 101 SNLLAVLRAPSSSRSLVVFF-PSGENAEQVSYVTLDPVAD 139
>02_04_0192 + 20795659-20796309
Length = 216
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 234 ASSASLIVFFLPTPSSASLLVFFLPAP 154
+SS+S V FLP P+S S FLP+P
Sbjct: 46 SSSSSPFVSFLPPPTSPSPFHRFLPSP 72
>07_03_1348 +
25945444-25945551,25946411-25946607,25946732-25946804,
25947003-25947092,25947410-25947465,25947559-25947738,
25947813-25948006,25948095-25948234,25948324-25948466,
25948549-25948697,25948784-25949148,25949264-25949368
Length = 599
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 115 AKELEEKDYQVCRRSWKKED*QACGRRSW-KKEDY*ACGRSWKKEDCNRRRMKNTATTEE 291
A + ++K + CRR W C + W ++ED C S E N R + ++ +
Sbjct: 88 AAQFKDKTARQCRRRWYNYLNSECKKGGWSREEDLLLCEIS---ELANMRSVTSSVRQQA 144
Query: 292 RRLQPPKE 315
R + P E
Sbjct: 145 RHIAMPME 152
>01_06_1777 + 39818212-39819696
Length = 494
Score = 27.9 bits (59), Expect = 3.2
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -1
Query: 270 LHSSAIAVFFLPASSA--SLIVFFLPT-PSSASLLVFFLPAPSADLIVFFFQLLRPQS*N 100
+HSS +A +S SL+ LP+ PS+ SLL +P V F+ P S
Sbjct: 52 VHSSLLAAASASSSDLLPSLLRRILPSSPSADSLLAASIPHLPPAAAVSVFRSSLPSSLA 111
Query: 99 PLFSRSLVVLFLR 61
P +SRS L R
Sbjct: 112 PSWSRSFSALLRR 124
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 6 RERRRKKITYLEKKKQACREERGLPGSGKKEGFKIA-GEGAG 128
RER R+K EKK + ER G KK G K + GE G
Sbjct: 246 RERERQKDREREKKDYDSKHERYDDGGAKKNGSKASRGEEDG 287
>07_01_1103 + 10141766-10143583
Length = 605
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 146 SAEGAGRKKTNKLAEEGVGRKKTIKLAEEAGRKKTAIAEE*RILQP 283
S G RK+ + E+GVGR + A ++ +TA+ EE R++ P
Sbjct: 163 SGHGKKRKREPQSGEDGVGRARA---APQSAGTETALLEE-RVMPP 204
>02_04_0312 - 21942310-21943356
Length = 348
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 134 KTIKSAEGAGRKKTNKLAEEGVGRKK 211
K+ K+AEG+ R++ ++ A GVG +K
Sbjct: 320 KSSKAAEGSSRRRRDESARGGVGEEK 345
>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
Length = 158
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 113 GRRSWKKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLA--EEAGRKK 247
GRR+ ++ K E AGR+K + A G G++K + AGR+K
Sbjct: 15 GRRAAGRR--KEEEEAGRRKAGEEARRGAGKRKRRRGGGRRAAGRRK 59
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 113 GRRSWKKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLA--EEAGRKK 247
GRR+ ++ K E AGR+K + A G G++K + AGR+K
Sbjct: 51 GRRAAGRR--KEEEEAGRRKAGEEARRGAGKRKRRRGGGRRAAGRRK 95
>05_03_0251 + 10987441-10988961,10989731-10989823,10989937-10990053
Length = 576
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +2
Query: 104 QDCGRRSWKKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLAEEAGRKKTAIAE 262
+D ++++ + A ++ +AEEG KKT+K++ E ++ I E
Sbjct: 93 KDINGETFERSSNDHGSDADKRLGEGVAEEGKAEKKTLKISSEDCARRFEIEE 145
>04_01_0360 - 4720997-4721812
Length = 271
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 6 RERRRKKITYLEKKKQACREERGLPGSGKKEGFKIAGEGAG 128
R+R R++ + E K +A E + G GK EG EG G
Sbjct: 116 RQRLRRRRQWREGKAEARVGEETVEGEGKGEGESGGREGGG 156
>06_01_1000 - 7778907-7780721
Length = 604
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 237 PASSASLIVFFLPTPSSASLLVFFLPAPSADL 142
PA SAS + TPS ++ L L APS +L
Sbjct: 46 PAPSASALALLRDTPSLSAPLYSLLAAPSHEL 77
>03_02_0181 + 6214594-6214884
Length = 96
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 131 KKTIKSAEGAGRKKTNKLAEEGVGRKKTI-KLAEEAGRKKTA 253
K + A+G G ++ + EEG GRKK + + E GR+ A
Sbjct: 20 KTKLGEAKGGGSEQLDWSLEEGGGRKKAAPEFSGEDGRRHAA 61
>09_06_0150 -
21225086-21225511,21225775-21226125,21227180-21227718,
21227813-21227929,21228038-21228290
Length = 561
Score = 26.2 bits (55), Expect = 9.9
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 234 ASSASLIVFFLPTPSSASLLVFFLPA-PSADL 142
+SS+SL LPTP +S FFL A P+ADL
Sbjct: 56 SSSSSL----LPTPPPSSAAAFFLSAKPAADL 83
>09_01_0025 - 441528-444284
Length = 918
Score = 26.2 bits (55), Expect = 9.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 240 LPASSASLIVFFLPTPSSASLLVFFLPAPSADLIVFF 130
L +S + F P P S L L APS L++FF
Sbjct: 124 LSSSLSDSTTFRPPPPPSNLLATILLRAPSTSLLLFF 160
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 26.2 bits (55), Expect = 9.9
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 127 EEKDYQVCRRSWKKED*QACGRRSWKKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQP 306
EE+ V + ++ + RRS ++E RS ++++ R ++ ++ EER+
Sbjct: 89 EERRQSVAAERRRSQEEEWERRRSQEEEAVREMRRSQEEDEVEERVIRESSEAEERKRVR 148
Query: 307 PKETDYL 327
KE D L
Sbjct: 149 EKEDDDL 155
>02_01_0035 - 220036-221419,222050-222801
Length = 711
Score = 26.2 bits (55), Expect = 9.9
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 101 FQDCGRRS--WKKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLAEEAGRKKTAIAE 262
FQ+ G + W++ + + A R+ + E+ K + A+E+G+K+ A A+
Sbjct: 545 FQEPGLKGPLWEEVSARMAAAGYRRNAKRCKEKWENINKYFRKAKESGKKRPAHAK 600
>01_04_0139 - 16570515-16571141
Length = 208
Score = 26.2 bits (55), Expect = 9.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 6 RERRRKKITYLEKKKQACREERGLPGSGKKEGFKIAGEGAG 128
R+R R++ + E K +A E G GK EG EG G
Sbjct: 31 RQRLRRRRQWREGKAEARVGEETAEGEGKGEGESGGREGGG 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,644,084
Number of Sequences: 37544
Number of extensions: 219418
Number of successful extensions: 874
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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