Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G07
         (405 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    25   1.0  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   1.0  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   3.2  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    23   5.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    22   7.4  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    22   7.4  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    22   7.4  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    22   9.8  
AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.    22   9.8  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 192 SSASLLVFFLPAPSADLIVFFFQLLRPQS 106
           S  S+LVF+LPA S + I     +L  Q+
Sbjct: 267 SYLSVLVFYLPADSGEKIALCISILLSQT 295


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 128  KKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLAEEA 235
            +K+  K A G G+KK  K  +EG+ +K+  ++  +A
Sbjct: 980  RKRKKKGASG-GQKKRQKAMDEGLSQKQKGRILSKA 1014



 Score = 24.6 bits (51), Expect = 1.4
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +2

Query: 128  KKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLAEEAGRKKTAIAEE*RILQPPK 289
            +K+  K+  G+G    ++  EEG G +K  K     G+KK   A +  + Q  K
Sbjct: 955  RKRKEKARRGSGGDSDSE-EEEGEGSRKRKKKGASGGQKKRQKAMDEGLSQKQK 1007


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 3   TRERRRKKITYLEKKKQACREERGLPGSGKKE 98
           T ERR+K +  +  +++   E + +P   KKE
Sbjct: 395 TNERRKKTLEQIAAEEKRLLELQDVPKKNKKE 426


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 192 SSASLLVFFLPAPSADLIVFFFQLLRPQS*NPLFSRSLVVLFL 64
           ++  L   FL  P+AD +V      R +   PLF  +L V  L
Sbjct: 106 AAGKLTKLFLDQPNADRLVDVAAYARDRLNAPLFQYALSVALL 148


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +3

Query: 9   ERRRKKITYLEKKKQACREERGLPGSGKKEGFKIAGEGA 125
           E+ R +   + +K++ C  E  L    +KE +   G G+
Sbjct: 345 EQVRPRYEAMRRKEEECSRELNLKEQKRKELYAKQGRGS 383


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 179 KLAEEGVGRKKTIKLAEEAGRKK 247
           K  + G G K + KLAEEA  ++
Sbjct: 658 KSQKSGEGVKTSAKLAEEAAERR 680


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 179 KLAEEGVGRKKTIKLAEEAGRKK 247
           K  + G G K + KLAEEA  ++
Sbjct: 658 KSQKSGEGVKTSAKLAEEAAERR 680


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 192 SSASLLVFFLPAPSADLIVFFFQLL 118
           S  S+LVF+LP+ S + I     +L
Sbjct: 254 SFLSVLVFYLPSDSGEKISLCISIL 278


>AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.
          Length = 76

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 186 ASLLVFFLPAPSADLIVFFFQLLRP 112
           ++LLV  + AP      FFFQ  RP
Sbjct: 9   STLLVVVVIAPRHQCSPFFFQYNRP 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,723
Number of Sequences: 2352
Number of extensions: 6836
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)