Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G07
(405 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061598-1|AAL29146.1| 310|Drosophila melanogaster SD04909p pro... 32 0.25
BT001674-1|AAN71429.1| 781|Drosophila melanogaster RE52507p pro... 31 0.44
BT001508-1|AAN71263.1| 755|Drosophila melanogaster LD40404p pro... 31 0.44
AE013599-324|AAF59275.3| 755|Drosophila melanogaster CG12165-PA... 31 0.44
BT023558-1|AAY84958.1| 277|Drosophila melanogaster IP09724p pro... 30 1.4
AE014296-447|AAF47641.1| 277|Drosophila melanogaster CG15877-PA... 30 1.4
M57889-1|AAA28920.1| 1322|Drosophila melanogaster su(s) protein ... 29 3.1
AY071563-1|AAL49185.1| 1220|Drosophila melanogaster RE63043p pro... 29 3.1
AL031581-8|CAA20886.1| 1325|Drosophila melanogaster EG:115C2.3,F... 29 3.1
AE014298-82|AAF45534.1| 1325|Drosophila melanogaster CG6222-PA p... 29 3.1
AE014297-422|AAN13235.1| 741|Drosophila melanogaster CG15593-PB... 28 5.4
U97685-1|AAB58311.1| 986|Drosophila melanogaster replication fa... 27 7.2
L17340-1|AAA28573.1| 986|Drosophila melanogaster transcription ... 27 7.2
BT003618-1|AAO39621.1| 986|Drosophila melanogaster GH06471p pro... 27 7.2
AY128477-1|AAM75070.1| 939|Drosophila melanogaster RE39339p pro... 27 7.2
AY122077-1|AAM52589.1| 1008|Drosophila melanogaster AT18625p pro... 27 7.2
AE014298-628|AAF45943.3| 939|Drosophila melanogaster CG3626-PA ... 27 7.2
AE014297-166|AAF52082.1| 986|Drosophila melanogaster CG1119-PA,... 27 7.2
AE014297-165|AAX52937.1| 1008|Drosophila melanogaster CG1119-PB,... 27 7.2
AE014297-4720|AAF57130.2| 357|Drosophila melanogaster CG15561-P... 27 9.5
>AY061598-1|AAL29146.1| 310|Drosophila melanogaster SD04909p
protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/105 (20%), Positives = 49/105 (46%)
Frame = +1
Query: 16 EERRSLISXXXXXXXXXXEDYQGAGKKRVSRLRAKELEEKDYQVCRRSWKKED*QACGRR 195
EER+ L E + +R+++L A+ ++++ + K+++ + R+
Sbjct: 115 EERKKLREQKHQQAAQQREAKERERAERMAKLAAERAKKQEERKRIEERKRQELEELQRK 174
Query: 196 SWKKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPKETDYLW 330
++E+ A ++ KE ++ + T ++ L PP +T Y W
Sbjct: 175 MRQQEEAEALKKAKHKELEQQKLQQLTGAKPKKMLPPPPKTKYTW 219
>BT001674-1|AAN71429.1| 781|Drosophila melanogaster RE52507p
protein.
Length = 781
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/105 (20%), Positives = 49/105 (46%)
Frame = +1
Query: 16 EERRSLISXXXXXXXXXXEDYQGAGKKRVSRLRAKELEEKDYQVCRRSWKKED*QACGRR 195
EER+ L E + +R+++L A+ ++++ + K+++ + R+
Sbjct: 586 EERKKLREQKHQQAAQQREAKERERAERMAKLAAERAKKQEERKRIEERKRQELEELQRK 645
Query: 196 SWKKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPKETDYLW 330
++E+ A ++ KE ++ + T ++ L PP +T Y W
Sbjct: 646 MRQQEEAEALKKAKFKELEQQKLQQLTGAKPKKMLPPPPKTKYTW 690
>BT001508-1|AAN71263.1| 755|Drosophila melanogaster LD40404p
protein.
Length = 755
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/105 (20%), Positives = 49/105 (46%)
Frame = +1
Query: 16 EERRSLISXXXXXXXXXXEDYQGAGKKRVSRLRAKELEEKDYQVCRRSWKKED*QACGRR 195
EER+ L E + +R+++L A+ ++++ + K+++ + R+
Sbjct: 560 EERKKLREQKHQQAAQQREAKERERAERMAKLAAERAKKQEERKRIEERKRQELEELQRK 619
Query: 196 SWKKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPKETDYLW 330
++E+ A ++ KE ++ + T ++ L PP +T Y W
Sbjct: 620 MRQQEEAEALKKAKFKELEQQKLQQLTGAKPKKMLPPPPKTKYTW 664
>AE013599-324|AAF59275.3| 755|Drosophila melanogaster CG12165-PA
protein.
Length = 755
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/105 (20%), Positives = 49/105 (46%)
Frame = +1
Query: 16 EERRSLISXXXXXXXXXXEDYQGAGKKRVSRLRAKELEEKDYQVCRRSWKKED*QACGRR 195
EER+ L E + +R+++L A+ ++++ + K+++ + R+
Sbjct: 560 EERKKLREQKHQQAAQQREAKERERAERMAKLAAERAKKQEERKRIEERKRQELEELQRK 619
Query: 196 SWKKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPKETDYLW 330
++E+ A ++ KE ++ + T ++ L PP +T Y W
Sbjct: 620 MRQQEEAEALKKAKFKELEQQKLQQLTGAKPKKMLPPPPKTKYTW 664
>BT023558-1|AAY84958.1| 277|Drosophila melanogaster IP09724p
protein.
Length = 277
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +2
Query: 140 IKSAEGAGRKKTNKLAEEGVGR--KKTIKLAEEAGRKK 247
+ S++GA R K ++LAEE + + K+ KL +EA R+K
Sbjct: 222 LASSQGAARSKISQLAEEVIQKLDKEGEKLEDEAERRK 259
>AE014296-447|AAF47641.1| 277|Drosophila melanogaster CG15877-PA
protein.
Length = 277
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +2
Query: 140 IKSAEGAGRKKTNKLAEEGVGR--KKTIKLAEEAGRKK 247
+ S++GA R K ++LAEE + + K+ KL +EA R+K
Sbjct: 222 LASSQGAARSKISQLAEEVIQKLDKEGEKLEDEAERRK 259
>M57889-1|AAA28920.1| 1322|Drosophila melanogaster su(s) protein
protein.
Length = 1322
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 9 ERRRKKITYLEKKKQACREERGLPGSGKKEGFKIAGEGAG 128
E+ ++ K++ R E GL GSG K + +GEG G
Sbjct: 277 EKEHQRGVNNRKRRDRDRLEGGLAGSGSKRNRRDSGEGGG 316
>AY071563-1|AAL49185.1| 1220|Drosophila melanogaster RE63043p
protein.
Length = 1220
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 9 ERRRKKITYLEKKKQACREERGLPGSGKKEGFKIAGEGAG 128
E+ ++ K++ R E GL GSG K + +GEG G
Sbjct: 277 EKEHQRGVNNRKRRDRDRLEGGLAGSGSKRNRRDSGEGGG 316
>AL031581-8|CAA20886.1| 1325|Drosophila melanogaster
EG:115C2.3,FBgn0003575;su(s) protein.
Length = 1325
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 9 ERRRKKITYLEKKKQACREERGLPGSGKKEGFKIAGEGAG 128
E+ ++ K++ R E GL GSG K + +GEG G
Sbjct: 277 EKEHQRGVNNRKRRDRDRLEGGLAGSGSKRNRRDSGEGGG 316
>AE014298-82|AAF45534.1| 1325|Drosophila melanogaster CG6222-PA
protein.
Length = 1325
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 9 ERRRKKITYLEKKKQACREERGLPGSGKKEGFKIAGEGAG 128
E+ ++ K++ R E GL GSG K + +GEG G
Sbjct: 277 EKEHQRGVNNRKRRDRDRLEGGLAGSGSKRNRRDSGEGGG 316
>AE014297-422|AAN13235.1| 741|Drosophila melanogaster CG15593-PB,
isoform B protein.
Length = 741
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 128 KKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLAEEAGRKK 247
KKK K + +KK+ K ++ +KK K +++ GRKK
Sbjct: 561 KKKKSKKKKPKKQKKSKKKKKKDKYKKKNKKCSKKTGRKK 600
>U97685-1|AAB58311.1| 986|Drosophila melanogaster replication
factor C large subunit protein.
Length = 986
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 197 VGRK-KTIKLAEEAGRKKTAIAEE 265
VG+K K + + EEAG KK A+AEE
Sbjct: 271 VGKKLKYLVVGEEAGPKKLAVAEE 294
>L17340-1|AAA28573.1| 986|Drosophila melanogaster transcription
factor protein.
Length = 986
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 197 VGRK-KTIKLAEEAGRKKTAIAEE 265
VG+K K + + EEAG KK A+AEE
Sbjct: 271 VGKKLKYLVVGEEAGPKKLAVAEE 294
>BT003618-1|AAO39621.1| 986|Drosophila melanogaster GH06471p
protein.
Length = 986
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 197 VGRK-KTIKLAEEAGRKKTAIAEE 265
VG+K K + + EEAG KK A+AEE
Sbjct: 271 VGKKLKYLVVGEEAGPKKLAVAEE 294
>AY128477-1|AAM75070.1| 939|Drosophila melanogaster RE39339p
protein.
Length = 939
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 107 DCGRRSWKKKTIKSAEGAGRKKTNKLAEEGVGR 205
+CGR SW+ K K + GR K EEGV R
Sbjct: 769 ECGR-SWRVKFNKPIDFIGRNALLKQREEGVKR 800
>AY122077-1|AAM52589.1| 1008|Drosophila melanogaster AT18625p
protein.
Length = 1008
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 197 VGRK-KTIKLAEEAGRKKTAIAEE 265
VG+K K + + EEAG KK A+AEE
Sbjct: 271 VGKKLKYLVVGEEAGPKKLAVAEE 294
>AE014298-628|AAF45943.3| 939|Drosophila melanogaster CG3626-PA
protein.
Length = 939
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 107 DCGRRSWKKKTIKSAEGAGRKKTNKLAEEGVGR 205
+CGR SW+ K K + GR K EEGV R
Sbjct: 769 ECGR-SWRVKFNKPIDFIGRNALLKQREEGVKR 800
>AE014297-166|AAF52082.1| 986|Drosophila melanogaster CG1119-PA,
isoform A protein.
Length = 986
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 197 VGRK-KTIKLAEEAGRKKTAIAEE 265
VG+K K + + EEAG KK A+AEE
Sbjct: 271 VGKKLKYLVVGEEAGPKKLAVAEE 294
>AE014297-165|AAX52937.1| 1008|Drosophila melanogaster CG1119-PB,
isoform B protein.
Length = 1008
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 197 VGRK-KTIKLAEEAGRKKTAIAEE 265
VG+K K + + EEAG KK A+AEE
Sbjct: 271 VGKKLKYLVVGEEAGPKKLAVAEE 294
>AE014297-4720|AAF57130.2| 357|Drosophila melanogaster CG15561-PA
protein.
Length = 357
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +2
Query: 26 DHLSRKKKTSVPXXXXXXXXXXXXGFQDCGRRSWKKKTIKSAEGAGRKKTNKLAEEGVGR 205
+ L RK KT+ P + C ++ KKK + E + + ++L E +
Sbjct: 188 EKLQRKLKTT-PETEHRAVESVDDSVEQCDTKAKKKKKSIAEEFSEACEVSQLEEPIKSK 246
Query: 206 KKTIKLAEEAGRKKTA 253
KK AE+AG++ A
Sbjct: 247 KKKKDKAEKAGKESPA 262
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,818,212
Number of Sequences: 53049
Number of extensions: 328442
Number of successful extensions: 1248
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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