Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G06
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    25   0.32 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.55 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   3.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.0  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 25.4 bits (53), Expect = 0.32
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +1

Query: 286 ISGHGNLLSSVAPPSQL-PNFIT---AVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 453
           +S  GN+L+   P  +  P+ I    A+ P      N+LP   LP  P P+P+ PI    
Sbjct: 137 MSPPGNVLNLTMPKYEPNPSIIDPGPALPPAGFLCNNYLP---LPQVP-PLPLPPIFAPT 192

Query: 454 RADPAAETE 480
             +P+A  E
Sbjct: 193 MINPSAICE 201


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 355 VSPTPAN-LQNHLPPQDLPATPHPVPVQPILVQQ 453
           V+P P++   +  P  ++P  P P P+   LVQ+
Sbjct: 69  VTPLPSDGTTSPEPDPEIPVAPEPAPLASPLVQE 102


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 285 RCWRFRNPRLFIRTHVELYFIF 220
           R +   N + FIR HVEL   F
Sbjct: 365 RLYGIENLQAFIRKHVELAHYF 386


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 380 RITCLHKICLLHH 418
           ++  L+KIC LHH
Sbjct: 498 QLNTLNKICALHH 510


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 380 RITCLHKICLLHH 418
           ++  L+KIC LHH
Sbjct: 223 QLNTLNKICALHH 235


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 394 PQDLPATPHPVP 429
           P+ +P+TP+P P
Sbjct: 205 PEPVPSTPYPPP 216


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 316 VAPPSQLPNFITAVSPTPANLQNHLPP 396
           V  PS  P  + ++SP+   L   LPP
Sbjct: 191 VNAPSVSPASLPSISPSGGFLPKWLPP 217


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +2

Query: 71  IILGLIHI*KQNRISHRLISFVLKTSYLLDI 163
           +++ L+HI    R++ R +   LKT+  + +
Sbjct: 18  LVVLLVHISSSERVTRRRLRRPLKTTQSVSV 48


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 87  FIYRNKTEFLTG*FHSF*KLVIYL 158
           F+ R+  E+     H F +L++YL
Sbjct: 146 FLCRHTVEYFQNYIHFFYQLLLYL 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,791
Number of Sequences: 336
Number of extensions: 2968
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)