Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G06
(535 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.007
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 35 0.009
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.11
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.44
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.44
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 29 0.58
SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 28 0.76
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 1.3
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 1.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 1.3
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 27 1.8
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 27 1.8
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 27 1.8
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 27 1.8
SPCC1259.06 |||transcription factor TFIID complex subunit 8 |Sch... 27 2.3
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch... 27 2.3
SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces p... 27 2.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 3.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 5.4
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 25 5.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 7.1
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 7.1
SPCC1020.10 |oca2||serine/threonine protein kinase Oca2 |Schizos... 25 9.4
SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual 25 9.4
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 9.4
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 25 9.4
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 25 9.4
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.1 bits (77), Expect = 0.007
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +1
Query: 262 RIPEPP---APISGHGNLLSSVAPPS-QLPNFITAVSPTPANLQNHLPPQDLPATPHPVP 429
++P PP AP++ + SS APP+ PN +T+ SP N +P +P PVP
Sbjct: 200 KVPPPPLSQAPVANTSSRPSSFAPPAGHAPN-VTSESPKFPNRGPSIPSASVP----PVP 254
Query: 430 VQPILVQQRADPAAETEKF 486
++QQR + + +F
Sbjct: 255 PSSYVLQQRPNRVDDHGRF 273
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPI 441
PP P S + SS+ PP+Q P P+ +L + +PP P P+ P+
Sbjct: 158 PPIP-SKAPPIPSSLPPPAQ-PAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPV 211
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 34.7 bits (76), Expect = 0.009
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +3
Query: 273 TSSTYFWSWQPAI*CSTTVAASQLHYCCFAYSSESTESLASTRFACYTTPSTRSTHFSTA 452
TSS+ F S P S+ +++S + + SS S+ +L S+ + + PST S+ ST+
Sbjct: 192 TSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTS 251
Query: 453 ESRSSS 470
S SSS
Sbjct: 252 SSLSSS 257
Score = 30.3 bits (65), Expect = 0.19
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +3
Query: 318 STTVAASQLHYCCFAYSSESTESLASTRFACYTTPSTRSTHFSTAESRSSSRNR 479
S+T+++S ++SS ++ S +S+ F+ T S+ ST ST S SSS +R
Sbjct: 340 SSTISSSSSSPSSSSFSSTTSSSKSSSSFSS-TVSSSSSTSSSTLTSSSSSSSR 392
Score = 27.1 bits (57), Expect = 1.8
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +3
Query: 273 TSSTYFWSWQPAI*CSTTVAASQLHYCCFAYSSESTESLASTRFACYTTPSTRSTHFSTA 452
TSST S + S+T+++S + ++SS T S +ST + ++PS+ S +T+
Sbjct: 303 TSSTISSSSSSSSSFSSTLSSSSMSSSS-SFSSSPTSS-SSTISSSSSSPSSSSFSSTTS 360
Query: 453 ESRSSS 470
S+SSS
Sbjct: 361 SSKSSS 366
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.11
Identities = 21/69 (30%), Positives = 26/69 (37%)
Frame = +1
Query: 307 LSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAETEKF 486
LSS APP LP+ P P+ PP +P + PVP P
Sbjct: 1017 LSSKAPPVPLPSADAPPIPVPST----APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE 1072
Query: 487 SPAIPWSKG 513
P+IP G
Sbjct: 1073 IPSIPAPSG 1081
Score = 29.9 bits (64), Expect = 0.25
Identities = 21/77 (27%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP-VPVQPILVQ 450
PP P S G S PP P+ P P+ P +P P P V P+
Sbjct: 1050 PPVPKSSSG--APSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Query: 451 QRADPAAETEKFSPAIP 501
A P +P +P
Sbjct: 1108 SVAVPPVPAPSGAPPVP 1124
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.44
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFI----TAVSPTPANLQNHLPPQD-----LPATPH 420
P PPAP+S + +V PS +P+ ++V+P A + LPP +P+
Sbjct: 1476 PAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAP-SSTLPPSQSSFAHVPSPAP 1534
Query: 421 PVPVQPILVQQRADPAAET--EKFSPAIP 501
P P P + PA + + SP P
Sbjct: 1535 PAPQHPSAAALSSAPADNSMPHRSSPYAP 1563
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 391 PPQDLPATPHPVPVQPILVQQRADPAAETEKFSPA 495
PP +P HP P + I DP+ + F+ A
Sbjct: 1302 PPAVVPTVQHPQPTKQIPTAAVKDPSTTSTSFNTA 1336
Score = 25.4 bits (53), Expect = 5.4
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +1
Query: 256 KTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSP-TPANLQNHLPPQDLPATPHPVPV 432
K P P S H V PP+ + + + V P P + N P PA P PV
Sbjct: 1429 KASQPTNPGAPSNHA---PQVVPPAPM-HAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQ 1484
Query: 433 QP 438
P
Sbjct: 1485 LP 1486
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.44
Identities = 19/68 (27%), Positives = 40/68 (58%)
Frame = +3
Query: 273 TSSTYFWSWQPAI*CSTTVAASQLHYCCFAYSSESTESLASTRFACYTTPSTRSTHFSTA 452
TSS+YF + + S++ ++S + SS S++S +S+ + ++ S+ S+ S++
Sbjct: 141 TSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSS 200
Query: 453 ESRSSSRN 476
S SSS++
Sbjct: 201 SSSSSSKS 208
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 28.7 bits (61), Expect = 0.58
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 289 SGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPP-QDLPATPHPVPVQ 435
S HG+L S P+ N + +PT + + + PP P P P VQ
Sbjct: 322 SMHGSLHSKSPSPAFTANRFSPAAPTTVSSERNAPPYPSAPTRPTPPTVQ 371
>SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 716
Score = 28.3 bits (60), Expect = 0.76
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 279 WRFRNPRLFIRTHVELYFIFHFTSLLMRMATCDMYTIPPMSSR 151
W F+NP+ F+RT L+ H + + AT +++ I + +R
Sbjct: 344 WEFKNPQPFLRTREFLWQEGHTAHMTLEGATEEVHQILDLYAR 386
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.5 bits (58), Expect = 1.3
Identities = 23/62 (37%), Positives = 26/62 (41%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILV 447
P PP P + SS APP Q TA P A + P Q P P QPI+V
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQ--TAYPPQQA---PYPPVQAYPQAPQ----QPIVV 256
Query: 448 QQ 453
Q
Sbjct: 257 AQ 258
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 366 SSESTESLASTRFACYTTPSTRSTHFSTAESRSSS 470
SS S+ S +S+ + T ST S+H S++ S SSS
Sbjct: 194 SSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSS 228
Score = 26.2 bits (55), Expect = 3.1
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 321 TTVAASQLHYCCFAYSSESTESLASTRFACYTTPSTRSTHFSTAESRSSS 470
TTV++S + + SS S S ++T T+PS+ S+ S++ S SSS
Sbjct: 125 TTVSSSSVSSTTSSSSSSSPSSSSTTTT---TSPSSSSSSSSSSSSSSSS 171
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +1
Query: 244 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP 423
SS + P PP I G ++ P T PTP +L PP P+ P
Sbjct: 381 SSRAVSNPPAPPPAIPGRS--APALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPS 438
Query: 424 VPV 432
+P+
Sbjct: 439 LPM 441
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPAT 414
PP P +G + S PP+ P I VS PA PP P++
Sbjct: 254 PPIPPPSNGTVSS---PPNSPPRPIAPVSMNPAINSTSKPPLPPPSS 297
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 349 TAVSPTPANLQNHLPPQDLP--ATPHPVPVQP 438
T+ P P ++ + PP+ +P + P P P+ P
Sbjct: 227 TSAPPIPPSIPSSRPPERVPSLSAPAPPPIPP 258
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPP 396
P P AP+S + + S+ PP P+ + + AN + PP
Sbjct: 272 PRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 262 RIPEPPAPISGH-GNLLSSVAPPSQLPNFITAVSPTPAN 375
+IP PP P+ N SS +PP+ NF+ + P PAN
Sbjct: 354 QIP-PPKPMQKFPANAASSESPPNATGNFLPS-GPVPAN 390
Score = 25.0 bits (52), Expect = 7.1
Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Frame = +1
Query: 322 PPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQ--PILVQQRADPAAETEKFSPA 495
PP+ L T +Q LPP + P P P+Q P P T F P+
Sbjct: 327 PPAHLVQSAPVQRKTTPKIQR-LPPSSIQIPP-PKPMQKFPANAASSESPPNATGNFLPS 384
Query: 496 IPWSKGEAMV 525
P E M+
Sbjct: 385 GPVPANEPML 394
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 190 RHSHKK*SEVKYKV*FNMSSDKKTRIPEPPAPISGHGNLLSSVAPP 327
+H+ S+V+YKV NM S+ +P P + + L +V PP
Sbjct: 798 KHAEIMFSDVQYKVFINMMSNILPTLPVAEIPFT-YQQFLDAVKPP 842
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 304 LLSSVAPPS-QLPNFITAVSPTPANLQNHLPPQDLPATP 417
L +SV+ PS Q+ N A + TP + +PP +PA P
Sbjct: 239 LSNSVSSPSIQVSNNQNANNSTPLSFHAPIPPLHVPAVP 277
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 366 SSESTESLAS--TRFACYTTPSTRSTHFSTAESRSSSRNR 479
SS S+ SL S T + TPST S+ S++ S SSS ++
Sbjct: 121 SSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSK 160
>SPCC1259.06 |||transcription factor TFIID complex subunit 8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 222
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 328 SQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPI 441
SQL + PA + NHLPP T PV P+
Sbjct: 114 SQLLGSLAVSQNRPAYVVNHLPPFPASHTYMATPVYPV 151
>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 26.6 bits (56), Expect = 2.3
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 295 HGNLLSSVAPPSQL----PNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQRAD 462
H + + PPSQ+ +F P+ ++ N L +P + V ++ QRA
Sbjct: 323 HSKIHTHSTPPSQMYSAASHFRYRSDPSTRHVSNSTNKSSLHPSPTSLRVAHPIIPQRAS 382
Query: 463 PAAET 477
PA+++
Sbjct: 383 PASQS 387
>SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 289 SGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 438
S L++ +PP Q+P V P L L P + P P P
Sbjct: 272 SNQSRTLTTASPPEQIPLMEPQVYVNPQVLPGRLSSLSKPVSLPPTPSSP 321
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 2.3
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 318 STTVAASQLHYCCFAYSSESTESLASTRFACYTTPSTRSTHFSTAESRSSS 470
STT A+ + +S + ES +S YTT S ST T++ SSS
Sbjct: 829 STTSLAANKGVNSNSITSLNLESTSSVTSTAYTTDSVTSTTALTSQGPSSS 879
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 3.1
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +3
Query: 273 TSSTYFWSWQPAI*CSTTVAASQLHYCCFAYSSESTESLA-----STRFACYTTPSTRST 437
+SST S + S+++A+S + A SS ++ SLA ST A T+ +T S+
Sbjct: 121 SSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSS 180
Query: 438 HFSTAESRSSS 470
STA S S++
Sbjct: 181 LSSTAASNSAT 191
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/72 (20%), Positives = 26/72 (36%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILV 447
P P P HG PS+ P + + T ++ ++ P TP + P+
Sbjct: 250 PSKPTPFESHGPAKQISVQPSEHPKPSISTTTTGSSYRS-AESSHAPTTPDHFKLTPLTK 308
Query: 448 QQRADPAAETEK 483
+ P+ K
Sbjct: 309 LEPQPPSGSPSK 320
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 25.4 bits (53), Expect = 5.4
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -2
Query: 216 FTSLLMRMATCDMYTIPPMSS----R*LVFRTNEISR*EILFCFYI*ISPNIIFLSQSR* 49
FTS ++ M+ CD Y++ ++ + F NE+ R E+ + + +P IF + SR
Sbjct: 586 FTSTIVTMSVCDEYSLVVYTADNFLHHIRFDINELGRLELDYLTSVNFAP--IFTTPSR- 642
Query: 48 HVYPLTLL 25
V +TLL
Sbjct: 643 -VRSITLL 649
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.0 bits (52), Expect = 7.1
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = +1
Query: 280 APISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPA--TPHPVPVQPILVQQ 453
AP S + AP PN + + P+ P LP+ P P P P V+
Sbjct: 142 APASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVED 201
Query: 454 RADPAAETEKF 486
+A A E + +
Sbjct: 202 QAADANEPDDY 212
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.0 bits (52), Expect = 7.1
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 310 SSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAETEKFS 489
S+ A P + P+ +PT A LPP A P QP ++R +PA +T S
Sbjct: 434 SATATPKRSPS----ATPTSA-----LPPIGKFAPPTTAKAQPAPEKRRGEPAVQTRNHS 484
>SPCC1020.10 |oca2||serine/threonine protein kinase Oca2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 295 HGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPP 396
HG+ SS P + N + A SP P+ + P
Sbjct: 116 HGSANSSTVLPPRTENALHAASPKPSGSTGYTSP 149
>SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 238 NMSSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQ 399
++S+D K P AP++ + SS+ P+ P +V+ PA PPQ
Sbjct: 33 SISTDVKK--PSHSAPVTPVRSARSSMEQPTFRPVAKNSVTVAPARAAGFCPPQ 84
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 24.6 bits (51), Expect = 9.4
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 286 ISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHL---PPQDLPATPHPVPVQPILVQQR 456
+S +G S A + A++P PA Q L PPQ LPA P + +
Sbjct: 217 VSQNGTYYSIPAVNHPMAGQPIAIAPVPAPNQAALPPIPPQALPANGTPNTLASPVTLPA 276
Query: 457 ADPAAETEKFSPAIPWSKGEAMVSV 531
A+ A + + +P + AM V
Sbjct: 277 ANSAVQN---AQPVPMTSSPAMAVV 298
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 24.6 bits (51), Expect = 9.4
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 238 NMSSDKKTRIPEPPAPISGHGNLLSSVAPPS-QLPNFITAVSPTPANLQNHLPPQDLPAT 414
N+ K P P P HG SS P + ITA S T + + P+ P+T
Sbjct: 71 NIDLSKGIEYPPPEKPKKAHGKGKSSKRPKAVDRRRSITAPSKTEPSTPSTEKPE--PST 128
Query: 415 P 417
P
Sbjct: 129 P 129
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 24.6 bits (51), Expect = 9.4
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 14/65 (21%)
Frame = +1
Query: 265 IPEPPAPISGHGNL--------LSSVAP-----PSQLPNFITA-VSPTPANLQNHLPPQD 402
+ E P P+SG+GN+ LS V P PS P+ +++ +S + + + +P
Sbjct: 398 LSETPTPVSGNGNVADAPPDFSLSQVMPLDLIAPSMQPSAVSSPMSESHVQISSEMPRTG 457
Query: 403 LPATP 417
+ A P
Sbjct: 458 MSALP 462
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,222,658
Number of Sequences: 5004
Number of extensions: 46562
Number of successful extensions: 193
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 220420454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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