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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G06
         (535 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)                     33   0.15 
SB_48061| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.19 
SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.19 
SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016)                 32   0.34 
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)                 32   0.34 
SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24)                  31   0.45 
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.45 
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)                   31   0.45 
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)                   31   0.78 
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.0  
SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062)              30   1.4  
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)                     30   1.4  
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)              29   2.4  
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)                 29   2.4  
SB_31197| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)                   29   3.2  
SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0)                     28   4.2  
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)                   28   4.2  
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8)                       28   4.2  
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)                      28   4.2  
SB_57111| Best HMM Match : Drf_FH1 (HMM E-Value=3.3)                   28   5.5  
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)                28   5.5  
SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57)               28   5.5  
SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.5  
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.3  
SB_51860| Best HMM Match : ShTK (HMM E-Value=1.5e-09)                  27   7.3  
SB_28618| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.3  
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)                   27   7.3  
SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.3  
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.3  
SB_19791| Best HMM Match : Reprolysin (HMM E-Value=3.1)                27   7.3  
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)                  27   7.3  
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)                     27   9.6  
SB_33909| Best HMM Match : FH2 (HMM E-Value=0)                         27   9.6  
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)              27   9.6  
SB_1061| Best HMM Match : Extensin_2 (HMM E-Value=2)                   27   9.6  

>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
          Length = 662

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 367 PANLQNHLPPQDLPATPHPVPVQ-PILVQQRAD 462
           P N+Q H+PP  +P  P+ +P Q P ++    D
Sbjct: 53  PGNIQGHVPPPQMPMAPNQMPPQNPPMIDSNGD 85


>SB_48061| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 307

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = +1

Query: 238 NMSSDKKTRIPE-PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPAT 414
           ++ +   T IP+ PP P   H +      PP +LP   +A +  P +LQ   PP   P  
Sbjct: 136 SLPTSATTPIPQIPPPPTYLHPSQYPPSPPPWELPRVPSANATLPPHLQYGPPPPTSPGL 195

Query: 415 PHPVPVQPILVQQRADPAAETEKFSPAIP 501
            +    Q   + QR+ P    E F    P
Sbjct: 196 CN----QGYNLHQRSQPVHSMEPFPDQPP 220


>SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1554

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 355 VSPTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAETEKFSPA 495
           +SP  A +Q  L    +P T  P P  P L+++R   A    K SPA
Sbjct: 450 ISPIWAAIQKELNAFGIPTTAKPTPALPDLIKERLALAGAAGKTSPA 496


>SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016)
          Length = 419

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
 Frame = +1

Query: 241 MSSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHL------PPQD 402
           + SDK++    PP P  G  N  SS  PP +  +      PTP+  Q++       PP+ 
Sbjct: 315 VQSDKQS----PPTPSRGQSNKQSSPTPPPRQSD--KQSPPTPSRGQSNKQSSPTPPPRQ 368

Query: 403 LPATPHPVPVQPILVQQRA--DPAAETEKFSPAIPWSKGEA 519
                 P+P +    +Q +   P  +++K SP IP S+G++
Sbjct: 369 SDKQSPPIPSRGQSNKQSSPTPPPRQSDKQSPPIP-SRGQS 408


>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
          Length = 1258

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = +1

Query: 259 TRIPEPPAPISGHGNLLSSVAP---PSQLPNFITAVSPTPANL--QNHLPPQDLPATPHP 423
           T++P  PAPI+      SS  P   P QLP+     +  P+       LP    P+TP P
Sbjct: 246 TQLPSTPAPINPTPINPSSYQPNSHPPQLPSTQLPSTQLPSTQLPSTQLPSTQFPSTPAP 305

Query: 424 VPVQPI 441
           +   PI
Sbjct: 306 INPTPI 311



 Score = 31.5 bits (68), Expect = 0.45
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +1

Query: 259 TRIPEPPAPISGHGN---LLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVP 429
           T+ P  P PI+ + +   LLS++ P +  P    A++PTP N     P    P++  P  
Sbjct: 169 TQAPINPTPINSNSHQLQLLSTLIPSTTAPINPAAINPTPINPTPINPTPINPSSHQPSC 228

Query: 430 VQP 438
            QP
Sbjct: 229 YQP 231



 Score = 27.9 bits (59), Expect = 5.5
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 16/66 (24%)
 Frame = +1

Query: 289 SGHGNLLSSVAP----PS-QLPNFITAVSPTPANLQNH--------LPPQDLPATP---H 420
           S H N L   AP    PS QLP+    ++PTP N  +H        +P    P  P   +
Sbjct: 146 STHNNALQHSAPITQLPSTQLPSTQAPINPTPINSNSHQLQLLSTLIPSTTAPINPAAIN 205

Query: 421 PVPVQP 438
           P P+ P
Sbjct: 206 PTPINP 211



 Score = 27.5 bits (58), Expect = 7.3
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = +1

Query: 277 PAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPV---PVQPILV 447
           P PI+      + + P S  P+     S  P + Q  L    LP+TP P+   P+ P   
Sbjct: 206 PTPINPTPINPTPINPSSHQPSCYQPSSHQPNSHQPQLLLTQLPSTPAPINPTPINPSSY 265

Query: 448 QQRADP 465
           Q  + P
Sbjct: 266 QPNSHP 271


>SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24)
          Length = 324

 Score = 31.5 bits (68), Expect = 0.45
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +1

Query: 337 PNFITAV--SPTP-ANLQNHLPPQDLPATPHPVPVQPILV 447
           P  +TA   +PTP A+L+   PP+D+P  P PVP +  +V
Sbjct: 107 PEEVTAKDQAPTPQASLEEVEPPKDIPPLPPPVPKEKPIV 146


>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 476

 Score = 31.5 bits (68), Expect = 0.45
 Identities = 23/86 (26%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
 Frame = +1

Query: 274 PPAPISGHGNLLSSVAPPSQLP----NFITAVSPTPANLQNHLPPQDLPATPHPVPVQPI 441
           PP P +      +   PPSQ P       + + P P       PP    +   P P+   
Sbjct: 307 PPPPAASEPAAFAPAPPPSQAPPPPKTIPSTLPPPPVPSATSAPPPWATSNSGPKPLMST 366

Query: 442 LVQQ---RADPAAETEKFSPAIPWSK 510
            VQ+      P A      P  PWSK
Sbjct: 367 PVQRPPGMRPPGAGNGPGGPPPPWSK 392



 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 319 APPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPV 432
           APP    +   A +P P   Q   PP+ +P+T  P PV
Sbjct: 306 APPPPAASEPAAFAPAPPPSQAPPPPKTIPSTLPPPPV 343


>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
          Length = 638

 Score = 31.5 bits (68), Expect = 0.45
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 244 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP 423
           S+   ++  +PPAP+    N    +AP   L      + P P++    LPP +    P P
Sbjct: 413 STVSNSKEKKPPAPLPKAHN--EKIAPLPSLRASAATLPPLPSDEPPPLPPDEEKPPPPP 470

Query: 424 VPVQPIL 444
            P  P L
Sbjct: 471 APALPPL 477


>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
          Length = 619

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 24/75 (32%), Positives = 33/75 (44%)
 Frame = +1

Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILV 447
           P PP P+  H       APP QLP       P P  + +   PQ+ P T    P+Q +L+
Sbjct: 65  PVPPTPLVQHPE---PEAPP-QLP------PPPPFIVDDTESPQEQPPTTPVSPLQQLLL 114

Query: 448 QQRADPAAETEKFSP 492
           + R D     E+  P
Sbjct: 115 KGRIDKQEPEEEQKP 129


>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1850

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
 Frame = +1

Query: 268  PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP--VPVQPI 441
            P P      + +   + A P+Q P   TA   T    Q  + P   PAT +P   PV P 
Sbjct: 1295 PAPAPAAQAYPSAAPATAYPTQAPANPTAAPATAYPAQAPVNPTAAPATAYPAQAPVNPT 1354

Query: 442  LVQQRADPA 468
                 A PA
Sbjct: 1355 AAPATAYPA 1363


>SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
          Length = 830

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
 Frame = +1

Query: 256 KTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQ 435
           +T IP   + I+ H +   + AP    PN    ++P+P N+    PP   P+ PH  P+ 
Sbjct: 280 RTEIPPLSSLIATHNHSPPNTAPSP--PN----IAPSPPNIAPS-PPNTAPSPPHSDPIA 332

Query: 436 PILVQQRAD--PAAETEKFSPAIP 501
             L    A   P    +   PA P
Sbjct: 333 AALSGNLASTAPVISGQSSFPAPP 356


>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
          Length = 293

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
 Frame = +1

Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQ-NHLPPQDLPATPHP---VPVQ 435
           P P +PI        +  PP  +P+   +V P P        PPQ  PA P+P    P Q
Sbjct: 119 PPPYSPIPPQVPYPGAAGPP--MPHPTASVYPPPGGYPPTSYPPQPYPAQPYPQQGYPPQ 176

Query: 436 PILVQQRADPAAETEKFSPAIPW 504
           P   Q    P    + + P  P+
Sbjct: 177 P-PPQAYPQPGYPPQGYPPTGPY 198


>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1680

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
 Frame = +1

Query: 214 EVKYKV*FNMSSDKKTRIPEP-PAPISGHGNLLSSVAPPSQLPNFITAVSPTPAN--LQN 384
           EV Y      +   + + P P PAP        +    P+Q  N     +PT A   + +
Sbjct: 704 EVPYPTLSTAAQPTQAQNPAPTPAPTQAQNP--APTPAPTQAQNPAPTPAPTQAQPPVPS 761

Query: 385 HLPPQDLPATPHPVPVQPIL--VQQRADPAAET 477
             P Q  P  P P P Q +L  +  +  PA  T
Sbjct: 762 PAPTQAQPPAPSPAPTQALLQTMANQTQPATAT 794



 Score = 28.7 bits (61), Expect = 3.2
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
 Frame = +1

Query: 265 IPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPV-QPI 441
           +PE P P       LS+ A P+Q  N   A +P P   QN  P        +P P   P 
Sbjct: 702 VPEVPYPT------LSTAAQPTQAQN--PAPTPAPTQAQNPAPTPAPTQAQNPAPTPAPT 753

Query: 442 LVQQRADPAAETEKFSPA 495
             Q      A T+   PA
Sbjct: 754 QAQPPVPSPAPTQAQPPA 771



 Score = 27.9 bits (59), Expect = 5.5
 Identities = 19/63 (30%), Positives = 22/63 (34%)
 Frame = +1

Query: 313 SVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAETEKFSP 492
           S+ P    P   TA  PT A      P       P P P  P   Q  A   A T+   P
Sbjct: 700 SIVPEVPYPTLSTAAQPTQAQNPAPTPAPTQAQNPAPTPA-PTQAQNPAPTPAPTQA-QP 757

Query: 493 AIP 501
            +P
Sbjct: 758 PVP 760


>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
          Length = 774

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +1

Query: 328 SQLPNFITAVSPTPANLQN---HLPPQDLPATPHPVPVQPIL 444
           +Q P  I+ V+PTP N+ N      P D  AT    P  PI+
Sbjct: 71  TQTPTSISNVTPTPTNINNISSTTTPLDSSATTTTTPTLPIV 112


>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 158

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 18/65 (27%), Positives = 23/65 (35%)
 Frame = +1

Query: 244 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP 423
           ++ + T  P  P P +      S   P S  P   T  +PTP       P Q  P    P
Sbjct: 18  ATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAP---TQTTPTPTTPSPTAPTQTTPTPATP 74

Query: 424 VPVQP 438
            P  P
Sbjct: 75  TPTTP 79



 Score = 27.5 bits (58), Expect = 7.3
 Identities = 16/60 (26%), Positives = 22/60 (36%)
 Frame = +1

Query: 259 TRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 438
           T  P+ P P +      +    P+      TA +PT      H P +  P TP P    P
Sbjct: 78  TPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTP 137


>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 737

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 274 PPAPISGHGN---LLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPAT 414
           PP P+        LLS   PP  LP F +A++     L ++LPPQ LP++
Sbjct: 501 PPQPLPSSSTITFLLSHYLPPQPLP-FSSAITFL---LNHYLPPQPLPSS 546


>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
          Length = 942

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +1

Query: 310 SSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAETEKFS 489
           SS APP  LP   T+ S  P + ++   PQ + A     P +P +    + P        
Sbjct: 260 SSAAPPQSLPGLQTSPSLQPPSQRSTPSPQSMSALHSGKPKRPGMPPSPSVPHQSQPAVP 319

Query: 490 PA 495
           PA
Sbjct: 320 PA 321


>SB_31197| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 469

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +1

Query: 259 TRIPEPPAPISGHGNLLSSVAPPSQLPNF-ITAVSPTPANLQNHLPPQDLPATPHPVPVQ 435
           T+I   PA     G   +     SQLP   +T V   P   QN LP   L  T HP PV 
Sbjct: 58  TQITITPAQTKLSGLQQTHTRVESQLPTCTVTTVPVIPPISQNPLPSPTL-VTVHPAPVP 116

Query: 436 PILVQQRADPAAETEK 483
             +    + P +  ++
Sbjct: 117 IPITNANSSPDSSDDE 132


>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
          Length = 237

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +1

Query: 259 TRIPEPPAPISGHGNLLSSVAPPSQLP-NFITAVSP-TPANLQNHLPPQDLPATPHPVP 429
           T  P   AP +   +  +   P S  P ++  A +P TPA+    +PP    +TP P P
Sbjct: 60  TPAPAQQAPHTTAASQPAPYTPASGQPASYTPAYTPYTPASTVGRMPPTTSQSTPSPAP 118


>SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0)
          Length = 808

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = +1

Query: 319 APPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAETEKFSPAI 498
           AP    P+  T  +PT     N LPP   P T H +P   +         A  E+  P++
Sbjct: 300 APAKVQPSTPTP-TPTCMTPLNRLPPTPSPTTTHAIPQAYVSTPVNQSTVANREQALPSV 358


>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1071

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 364 TPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAETEKFSPA 495
           TP   + + P  DL  TP+P+ V+P     R +P   TE+++P+
Sbjct: 687 TPCT-ERYTPCNDLSVTPYPLSVKP-YAMNRYNPC--TERYTPS 726


>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
          Length = 924

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
 Frame = +1

Query: 349 TAVSPTPANLQNHLPPQDLPATP-----HPVPVQPILVQQRADPAAETEK 483
           T+ SP P   + H PP      P      P P+ P  VQ+ + P  +  K
Sbjct: 280 TSPSPQPTEAKPHTPPPPTSTPPTTAPRQPSPMAPAPVQKESPPLTDDRK 329


>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 469

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = +1

Query: 244 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP 423
           S+ + T   +P  P S     L++    S  P  +T  S    N + H PP     TP P
Sbjct: 46  STSRPTNALQPLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQSNNPRPHTPPSCQSNTPRP 105

Query: 424 VPVQP 438
           +   P
Sbjct: 106 LTPPP 110


>SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8)
          Length = 232

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +3

Query: 366 SSESTESLASTRFACYTTPSTRSTHFSTAESRSSSRNRKI*PS 494
           ++ +  +L S   + ++TPS ++TH S+ ++R +S +  + PS
Sbjct: 2   NTTAPSTLGSPGTSLFSTPSIQATHSSSIKTRDASLSSSLMPS 44


>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4529

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 8/50 (16%)
 Frame = +1

Query: 355  VSPTPANLQNHLPPQDLPAT--------PHPVPVQPILVQQRADPAAETE 480
            V   P N Q  +P Q +P          P P PVQP+  QQ+ D   + E
Sbjct: 2099 VMQQPINQQVQIPQQGMPVNIQPGPPPAPPPPPVQPVGAQQQPDDQQQLE 2148


>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = +1

Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 438
           P PP P + +    ++  PP   P +   + P P N     PP + P  P P P  P
Sbjct: 131 PYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPN----PPPPNAPYPPPPYPPPP 183



 Score = 27.5 bits (58), Expect = 7.3
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +1

Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQN--HLPPQDLPATPHPVPVQP 438
           P PP P   +    ++  PP   P +     P P N  N  + PP + P  P+P P  P
Sbjct: 186 PYPPPPNPPYPPPPNAPNPPPPNPPY-----PPPPNAPNPPYPPPPNAPNPPYPPPPNP 239


>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
          Length = 330

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = +1

Query: 244 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLP 408
           +S   T  P PP P +  G   SS   P   P    A  P P    + LPP   P
Sbjct: 274 ASQNATPPPPPPPPSNTPGMFASSGFQPPPPPPTDFAPPPPPPEPTSELPPPPPP 328


>SB_57111| Best HMM Match : Drf_FH1 (HMM E-Value=3.3)
          Length = 451

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = +1

Query: 265 IPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPH 420
           IP P  P+   GN  SSV P +  P+    V+P  A   N +P    PA PH
Sbjct: 72  IPNPGVPL---GNNFSSVMPSTMSPSLPFFVAPLAA---NQMP---YPALPH 114


>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
          Length = 382

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
 Frame = +1

Query: 256 KTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQN-------HLPPQDLPAT 414
           +T+ P+PPAP      + +   PP+     I    PTP   +        H+PP  L   
Sbjct: 173 ETKPPKPPAP----STIPTPPTPPAPPSPPIPTAPPTPPMPETPLPPGSPHIPPAPLHPH 228

Query: 415 PHPVPVQPILVQQRADPAAETEKFSPAIP 501
             P P  P       +P        PA P
Sbjct: 229 IPPAPPNPSKAIATPNPPMPETPLPPATP 257


>SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57)
          Length = 1121

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 19/80 (23%), Positives = 33/80 (41%)
 Frame = +1

Query: 244  SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP 423
            +SDK   + EP + ++      ++    S  P+ +   +PTPA+  +   P  L  T +P
Sbjct: 796  ASDKNPEVTEPSSYVNTEMASPAAAGSSSITPSNLRPTNPTPAHATDGGTPTPLRPT-NP 854

Query: 424  VPVQPILVQQRADPAAETEK 483
             P           P+  T K
Sbjct: 855  TPAHAASKPSNPRPSNPTPK 874


>SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 212

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 20/67 (29%), Positives = 26/67 (38%)
 Frame = +1

Query: 301 NLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAETE 480
           NLL     P +L N     S  P NL+   PP+     P    V P L  +      E  
Sbjct: 142 NLLPKNLLPRKLQNPSLQRSQPPRNLRRKPPPRSPLKRPPRSKVLPTLYNKTKRLLYEPP 201

Query: 481 KFSPAIP 501
           KF+  +P
Sbjct: 202 KFAKVVP 208


>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1554

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 20/65 (30%), Positives = 24/65 (36%)
 Frame = +1

Query: 244 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP 423
           SS  +   P P  P S  G   S   PP   P  +T   PT   +   +PP       HP
Sbjct: 673 SSSAQMLPPMPGPPSSMSGPTTSRHGPP---PTGLTMNPPTSMGMAPMMPPPGPGMGTHP 729

Query: 424 VPVQP 438
             V P
Sbjct: 730 QQVSP 734


>SB_51860| Best HMM Match : ShTK (HMM E-Value=1.5e-09)
          Length = 197

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 316 VAPPSQL--PNFITAVSPTPANLQNHLPPQDLPATPHPVP 429
           + PP+++  P     + PTPA L    PP  +P  P PVP
Sbjct: 111 LVPPTEISGPGPKETLPPTPATL----PPTTVPPAPAPVP 146


>SB_28618| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 172

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 364 TPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAET 477
           TP  L+N  P   +PA+ HP+P QP   Q     + ET
Sbjct: 26  TPTALENSNPSPLIPASHHPIP-QP--TQSNTSQSEET 60


>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
          Length = 1097

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
 Frame = +1

Query: 295  HGNLLSSVAPPSQLPNFITAVSPTP------ANLQNHLPPQDLPATPHPVPVQPILVQQR 456
            +G +  S  PPS  PN +  VS  P      A+L  + PP   P+ PHP  V     +  
Sbjct: 918  NGAVACSRGPPSTSPNAV-GVSGVPMATLITASLSRYPPPPQ-PSRPHPWTVGAWDPKDE 975

Query: 457  ADPAAETEKFSPAIPWSKGEAMVSVR 534
             D   E+     A+  +   A V  R
Sbjct: 976  KDLCPESHSNGVAVAPASDAACVKTR 1001


>SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 431

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 24/70 (34%), Positives = 32/70 (45%)
 Frame = +1

Query: 310 SSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAETEKFS 489
           SS  PP   P     + P PA  Q  +P  D+P +P PVP  P    Q+   +A +   S
Sbjct: 134 SSTPPP---PAKEAPLPPPPAQ-QEAVP--DIPTSPPPVPPLPTEPLQQTTTSAPS-LIS 186

Query: 490 PAIPWSKGEA 519
           PA   S  +A
Sbjct: 187 PAAAGSPSDA 196


>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1574

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 291  RNRCWRFRNPRLFIRTHVELYFIFHFTSLLMRMAT 187
            ++  W+  N R  +   ++L   FHFT L+MR  T
Sbjct: 1178 KDEWWQSENGRENVYLQLDLESEFHFTHLIMRFRT 1212


>SB_19791| Best HMM Match : Reprolysin (HMM E-Value=3.1)
          Length = 616

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 280 APISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQ-DLPATPH 420
           +P + HGN  + V   ++LP+  T ++ + AN     P   D  A PH
Sbjct: 322 SPPTNHGNQPTQVMDSNRLPDLTTTIASSEANTPAPDPLHVDTVARPH 369


>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
          Length = 1284

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = +1

Query: 244 SSDKKTRIPEPPAPISGHGNL---LSSVAPPSQLPNFITAVSPTPANL--QNHLPPQDLP 408
           SS   +    PP P+ G GNL   L+ +  P  L   +  V P P      +H  P DLP
Sbjct: 231 SSQSGSNDSPPPFPVEGEGNLTTFLAKIQAPRLLLRALDWVLPAPQRTPSSDHSLP-DLP 289

Query: 409 ATPH 420
             PH
Sbjct: 290 --PH 291


>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 145

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
 Frame = +1

Query: 322 PPSQLPNFITAVSPTPANLQNHLPPQDLP-ATPHPVPVQPILVQQRADPAAETEKFSP 492
           PP   P    A  P PA      PP   P A P P P  P      A PA +     P
Sbjct: 53  PPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAPP 110


>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 791

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +3

Query: 360 AYSSESTESLASTRFACYTTPSTRSTHFSTAESRSSSRNRKI*PSHTL 503
           +YSS S  S +S+  + +++ S   T  S + SR+SSR+     SH++
Sbjct: 197 SYSSRSRSSSSSSSGSSHSSRSQSHTPSSGSGSRNSSRSASRSQSHSV 244


>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
          Length = 480

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 23/80 (28%), Positives = 31/80 (38%)
 Frame = +1

Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 453
           PP P  G G    S+APP   P   +   P P   +N  PP     T    P  P    +
Sbjct: 215 PPPPPPGRGPSQRSLAPP---PTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPP----K 267

Query: 454 RADPAAETEKFSPAIPWSKG 513
            A P  +    +P  P ++G
Sbjct: 268 NAPPPPKRGSSNPPPPPTRG 287


>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
          Length = 1063

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 17/59 (28%), Positives = 21/59 (35%)
 Frame = +1

Query: 253 KKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVP 429
           KK   P PP P+    +L     PP   P  ++   P P       PP      P P P
Sbjct: 674 KKVPPPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPP--PPPPPPPGCAGLPPPPP 730


>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 195

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = +3

Query: 273 TSSTYFWSWQPAI*CSTTVAASQLHYCCFAYSSESTESLASTRFACYTTPSTRSTHFSTA 452
           TS+T + S   +  C+T+   +  + C  +Y+  ST S  ST     TT  T +T ++T 
Sbjct: 129 TSTTSYTS-TTSYTCTTSYTCTTSYTCTTSYT--STTSYTSTTSYTSTTSYTSTTSYTTT 185

Query: 453 ESRSSS 470
            S +++
Sbjct: 186 TSYTTT 191


>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
          Length = 392

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 23/80 (28%), Positives = 31/80 (38%)
 Frame = +1

Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 453
           PP P  G G    S+APP   P   +   P P   +N  PP     T    P  P    +
Sbjct: 127 PPPPPPGRGPSQRSLAPP---PTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPP----K 179

Query: 454 RADPAAETEKFSPAIPWSKG 513
            A P  +    +P  P ++G
Sbjct: 180 NAPPPPKRGSSNPPPPPTRG 199


>SB_1061| Best HMM Match : Extensin_2 (HMM E-Value=2)
          Length = 352

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
 Frame = +1

Query: 322 PPSQLPNFITAVS----PTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAETEKFS 489
           PP Q P+++  V     P P +   H P    P T   VP Q ++  Q   P       +
Sbjct: 264 PPPQQPHYVQQVGVANPPVPPS-SFHSPLLAYPPTSTNVPTQVLVGIQGYGPPGIQANST 322

Query: 490 PAIPWSKG 513
           P +P  +G
Sbjct: 323 PQLPMYRG 330


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,521,198
Number of Sequences: 59808
Number of extensions: 349058
Number of successful extensions: 1180
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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