Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G06
(535 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 36 0.014
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 36 0.014
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 35 0.032
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 34 0.056
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 34 0.056
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 32 0.30
U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical pr... 31 0.52
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 31 0.52
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 31 0.52
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 31 0.52
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 31 0.52
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 31 0.69
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 0.69
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 0.69
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 0.69
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 31 0.69
AF016673-4|AAB66125.2| 743|Caenorhabditis elegans Hypothetical ... 31 0.69
Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical pr... 30 0.91
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 30 0.91
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 30 0.91
U00050-3|AAL02480.1| 556|Caenorhabditis elegans Hypothetical pr... 30 0.91
U00050-2|AAL02479.1| 582|Caenorhabditis elegans Hypothetical pr... 30 0.91
U00050-1|AAA50697.1| 583|Caenorhabditis elegans Hypothetical pr... 30 0.91
AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical ... 30 0.91
AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical ... 30 0.91
AL023835-8|CAA19491.1| 483|Caenorhabditis elegans Hypothetical ... 30 1.2
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 29 2.8
Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z79604-2|CAB01900.1| 780|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear recep... 29 2.8
AF332204-1|AAK17975.1| 519|Caenorhabditis elegans nuclear recep... 29 2.8
Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF067937-4|AAF99911.2| 352|Caenorhabditis elegans Hypothetical ... 28 3.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z47745-3|CAA87666.1| 313|Caenorhabditis elegans Hypothetical pr... 28 4.8
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 28 4.8
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 28 4.8
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 28 4.8
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 28 4.8
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 28 4.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 4.8
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 4.8
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 4.8
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 4.8
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 28 4.8
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 6.4
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 27 6.4
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 27 6.4
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 27 6.4
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 27 6.4
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 27 6.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 6.4
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z75549-1|CAA99917.1| 424|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 27 8.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 27 8.5
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 27 8.5
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 27 8.5
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 27 8.5
AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic mul... 27 8.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 8.5
AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell... 27 8.5
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 36.3 bits (80), Expect = 0.014
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +1
Query: 247 SDKKTRIPEPPAPISGHGNLLSSVA-----PPSQLPNFITAVSPTPANLQNHLPPQDLPA 411
SD++ P PP P + +SSV PP QL N + P NHLP P
Sbjct: 814 SDEECDPPPPPKPQVSTSSRMSSVPSHPPPPPQQLGNPMVGYPGMPLQSPNHLPLTPSPL 873
Query: 412 TPHPVPVQP 438
+ P P P
Sbjct: 874 SAPPKPFSP 882
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 36.3 bits (80), Expect = 0.014
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +1
Query: 247 SDKKTRIPEPPAPISGHGNLLSSVA-----PPSQLPNFITAVSPTPANLQNHLPPQDLPA 411
SD++ P PP P + +SSV PP QL N + P NHLP P
Sbjct: 814 SDEECDPPPPPKPQVSTSSRMSSVPSHPPPPPQQLGNPMVGYPGMPLQSPNHLPLTPSPL 873
Query: 412 TPHPVPVQP 438
+ P P P
Sbjct: 874 SAPPKPFSP 882
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 35.1 bits (77), Expect = 0.032
Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPAN-LQNHLPPQDLPATPHPVPVQPIL 444
P PAP+ + APP +P V P P + PA P P P Q
Sbjct: 277 PPNPAPVVQQASAPVQQAPPKPVPQQTPPVQQAPPKPAVQQAPTRAAPAPPKPAPQQAPP 336
Query: 445 VQQRADPAAETEKFSPAI 498
VQQ A + +P +
Sbjct: 337 VQQNPPKPAVQQAQAPVV 354
Score = 30.3 bits (65), Expect = 0.91
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Frame = +1
Query: 265 IPEPPAPISGHGNLLSSVAPPSQLPNFITAV----SPTPANLQNHLPPQDLPATPHPVPV 432
+ PP PI ++ PP Q V +P P Q P Q P P PVP
Sbjct: 244 VQAPPKPIVQQAPVVQQAPPPKQQQAQAQPVQQPPNPAPVVQQASAPVQQAP--PKPVPQ 301
Query: 433 QPILVQQRADPAAETEKFSPAIP 501
Q VQQ A + + A P
Sbjct: 302 QTPPVQQAPPKPAVQQAPTRAAP 324
Score = 27.1 bits (57), Expect = 8.5
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 298 GNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPV--PVQPILVQQ-RADPA 468
G L SVA Q+P A +PA Q PA P+ QP QQ +A PA
Sbjct: 8 GLLFVSVAGQQQVPVIQQAPPNSPAQQQQQAQAHAPPAQAKPIVQQTQPAQKQQAQAPPA 67
Query: 469 AE 474
A+
Sbjct: 68 AQ 69
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 34.3 bits (75), Expect = 0.056
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPI-L 444
P P P ++ + P Q ++ V+P + P Q PA HP P+QP +
Sbjct: 352 PVQPQPYVAPAHITQEIQPAPQ--PYVAPVAPVAQEIHTIQPIQ--PAPIHPAPLQPAHV 407
Query: 445 VQQRADPAAETE 480
VQ+ A A ET+
Sbjct: 408 VQETAHVAPETK 419
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 34.3 bits (75), Expect = 0.056
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 283 PISG-HGNLLSSVAPPSQLPNFITAVSPT-PANLQN--HLPPQDLPATPHPVPVQP 438
P G +G PP Q+ + + P+ PA+L N LPP + P PHP+P P
Sbjct: 172 PFGGDYGGYKFQQQPPPQINRYGSGPPPSKPADLSNTRSLPPVNNPPPPHPIPQFP 227
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 PNFITAVSPTPANLQN-HLPPQDLPATPHPVPVQPILVQQRADPAAETEKFSPAIP 501
P + P P L + LP +D TP P PV P VQ+R P E E+ +P IP
Sbjct: 1579 PQVSESTCPIPEPLADLKLPVEDDEKTPEPEPVVPGQVQERIIP-IEVEQ-APTIP 1632
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 PNFITAVSPTPANLQN-HLPPQDLPATPHPVPVQPILVQQRADPAAETEKFSPAIP 501
P + P P L + LP +D TP P PV P VQ+R P E E+ +P IP
Sbjct: 1579 PQVSESTCPIPEPLADLKLPVEDDEKTPEPEPVVPGQVQERIIP-IEVEQ-APTIP 1632
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 PNFITAVSPTPANLQN-HLPPQDLPATPHPVPVQPILVQQRADPAAETEKFSPAIP 501
P + P P L + LP +D TP P PV P VQ+R P E E+ +P IP
Sbjct: 1579 PQVSESTCPIPEPLADLKLPVEDDEKTPEPEPVVPGQVQERIIP-IEVEQ-APTIP 1632
>U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical
protein C02F12.8 protein.
Length = 687
Score = 31.5 bits (68), Expect = 0.39
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 367 PANLQNHLPPQDLPATPHPVPVQPILVQQ 453
P QN+ PPQ +PA P +PV ++V Q
Sbjct: 175 PVGSQNYNPPQFVPAPPTMMPVGAVMVSQ 203
>Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical
protein T07C12.8 protein.
Length = 965
Score = 31.1 bits (67), Expect = 0.52
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 244 SSDKKTRIPEPPAPISGHGNLLSSVAPP-SQLPNFI---TAVSPTPANLQNHLPPQDLPA 411
SS +T + N L AP +P + TA+ P + +N LPP LP+
Sbjct: 451 SSSNQTSTISNEQQFANFVNFLKQTAPVIPYIPTLVRSLTALDPRSSPSENILPPGTLPS 510
Query: 412 TPHPVPVQ 435
P P+ V+
Sbjct: 511 NPAPIDVR 518
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 31.1 bits (67), Expect = 0.52
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 313 SVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 453
S A + + A SP+P+ HL P + + PV + P +QQ
Sbjct: 758 STAAAATAERLVNATSPSPSVASQHLVPTETSTSVPPVTIVPPAIQQ 804
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 31.1 bits (67), Expect = 0.52
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 313 SVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 453
S A + + A SP+P+ HL P + + PV + P +QQ
Sbjct: 758 STAAAATAERLVNATSPSPSVASQHLVPTETSTSVPPVTIVPPAIQQ 804
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 31.1 bits (67), Expect = 0.52
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 313 SVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 453
S A + + A SP+P+ HL P + + PV + P +QQ
Sbjct: 758 STAAAATAERLVNATSPSPSVASQHLVPTETSTSVPPVTIVPPAIQQ 804
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 31.1 bits (67), Expect = 0.52
Identities = 25/78 (32%), Positives = 29/78 (37%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILV 447
PE PAP + AP Q P P PA L P+ P P PVQ
Sbjct: 69 PEAPAP--------APTAPDVQQPGPAPVPVPEPAQLAPQSAPEPTPDAPAAAPVQE--- 117
Query: 448 QQRADPAAETEKFSPAIP 501
+ PA ET +P P
Sbjct: 118 TPQVAPAPETPAPAPETP 135
Score = 31.1 bits (67), Expect = 0.52
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Frame = +1
Query: 268 PEP-PAPISGHGNLLSSVAP-PSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQ-- 435
P P P P+ L AP P+ V TP P P TP P PVQ
Sbjct: 84 PGPAPVPVPEPAQLAPQSAPEPTPDAPAAAPVQETPQVAPAPETPAPAPETPAPAPVQET 143
Query: 436 PILVQQRADPAAETEKFSPAIPWS 507
P +V +P E PA P S
Sbjct: 144 PQVVAPAPEPTPEAAAPVPADPQS 167
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 30.7 bits (66), Expect = 0.69
Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = +1
Query: 259 TRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQ--NHLPPQDLPATPHPVPV 432
T EP P+S N S PN+ TA S PA+ +H PP PAT
Sbjct: 60 TTSQEPVKPVSQIPNGAPSYQYNHAAPNYPTAASAFPAHSAGFSHQPPSFSPAT------ 113
Query: 433 QPILVQQRA--DPAAETEKFSPAIPWSKGEAMVSVR 534
QP + A PA P P S G A S++
Sbjct: 114 QPSMNGHHAPPPPAVSRPPAFPTPPPSVGSAAPSIQ 149
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 0.69
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPI 441
P PP P SG + S P Q PN+ TP N + +PP P P + PI
Sbjct: 574 PPPPPPSSGTRGIAPS-RPLPQAPNY-----GTPENRPHAVPPPPPPPPPQSFGMAPI 625
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 0.69
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPI 441
P PP P SG + S P Q PN+ TP N + +PP P P + PI
Sbjct: 400 PPPPPPSSGTRGIAPS-RPLPQAPNY-----GTPENRPHAVPPPPPPPPPQSFGMAPI 451
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 0.69
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPP--SQLPNFITAVSPTPANLQNH-LPPQDLPATPHP---VPVQ 435
PPAP H + + APP S N + +P PA H +P P P+P VP
Sbjct: 68 PPAPYPQHA--VPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPA- 124
Query: 436 PILVQQRADPAAETEKFSPAIP 501
P QQ+ P + P P
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPPP 146
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPN--FITAVSPTPANLQNHLPPQDLPATPHPVPVQPI 441
P PP P + PP P+ +I +P PA +++ PP P +P P
Sbjct: 132 PPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSAPP---PQPQYPQQQPPQ 188
Query: 442 LVQQR 456
QQR
Sbjct: 189 YPQQR 193
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 30.7 bits (66), Expect = 0.69
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 310 SSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPA 468
SS P + + A S TPA Q P Q P T V+P+++ + + PA
Sbjct: 199 SSRKPSKEDSSPFDASSATPAPSQLETPQQQKPTTTRHFQVEPVVLSEPSTPA 251
>AF016673-4|AAB66125.2| 743|Caenorhabditis elegans Hypothetical
protein T06D4.3 protein.
Length = 743
Score = 30.7 bits (66), Expect = 0.69
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 241 MSSDKKTRIPEPPAPISGHGNLLSSVAP--PSQLPNFITAVSPTPANLQNHLPPQDLP 408
+SSDKK+ +PP + H L + AP S+ PN T+ P ++ +P D P
Sbjct: 35 ISSDKKSE--QPPPILPSHTEALKAPAPVTTSRPPNLTTSTLPNSSSRPPSIPICDTP 90
>Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical
protein C07E3.8 protein.
Length = 294
Score = 30.3 bits (65), Expect = 0.91
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 308 YLV*HHRRSFPTSLLLFRLLQRIYRITCLHKICL 409
Y V H R+ FPT + ++L +I I + K+C+
Sbjct: 223 YKVKHFRKCFPTKKMSIKILSQIENIQDIRKLCI 256
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 30.3 bits (65), Expect = 0.91
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 277 PAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQN-HLPPQDLPATPHPVPVQPILVQQ 453
PAP S +++ PP LP + P + LPP + P PVQPI Q
Sbjct: 336 PAPTSQPVQVMT---PPPTLPPVQVPIQTLPPQTRPPQLPPVQITQPPIQTPVQPIFFQT 392
Query: 454 RADP 465
P
Sbjct: 393 TRPP 396
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 30.3 bits (65), Expect = 0.91
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 277 PAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQN-HLPPQDLPATPHPVPVQPILVQQ 453
PAP S +++ PP LP + P + LPP + P PVQPI Q
Sbjct: 433 PAPTSQPVQVMT---PPPTLPPVQVPIQTLPPQTRPPQLPPVQITQPPIQTPVQPIFFQT 489
Query: 454 RADP 465
P
Sbjct: 490 TRPP 493
>U00050-3|AAL02480.1| 556|Caenorhabditis elegans Hypothetical
protein F09F7.5c protein.
Length = 556
Score = 30.3 bits (65), Expect = 0.91
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 253 KKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPV 432
+K + P P AP LSS P Q P FI A S P ++ + PP A P
Sbjct: 332 RKKKGPAPKAPSLPPD--LSS--PTFQAPGFIPAFSARPVSMPPNRPPPSYEAPSFDAPE 387
Query: 433 QP--ILVQQRA 459
P +L+ RA
Sbjct: 388 APGTVLINGRA 398
>U00050-2|AAL02479.1| 582|Caenorhabditis elegans Hypothetical
protein F09F7.5b protein.
Length = 582
Score = 30.3 bits (65), Expect = 0.91
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 253 KKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPV 432
+K + P P AP LSS P Q P FI A S P ++ + PP A P
Sbjct: 331 RKKKGPAPKAPSLPPD--LSS--PTFQAPGFIPAFSARPVSMPPNRPPPSYEAPSFDAPE 386
Query: 433 QP--ILVQQRA 459
P +L+ RA
Sbjct: 387 APGTVLINGRA 397
>U00050-1|AAA50697.1| 583|Caenorhabditis elegans Hypothetical
protein F09F7.5a protein.
Length = 583
Score = 30.3 bits (65), Expect = 0.91
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 253 KKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPV 432
+K + P P AP LSS P Q P FI A S P ++ + PP A P
Sbjct: 332 RKKKGPAPKAPSLPPD--LSS--PTFQAPGFIPAFSARPVSMPPNRPPPSYEAPSFDAPE 387
Query: 433 QP--ILVQQRA 459
P +L+ RA
Sbjct: 388 APGTVLINGRA 398
>AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical
protein D1007.13a protein.
Length = 142
Score = 30.3 bits (65), Expect = 0.91
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 244 SSDKKTRIPEPPAPISG-HGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLP 408
+S T PPA S +G+ + S PPS F + PT ++ + PP+DLP
Sbjct: 19 ASTSSTAYSPPPATSSTTYGSSIPSTYPPS---TFAPSAYPTSSSWGSTHPPEDLP 71
>AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical
protein D1007.13b protein.
Length = 247
Score = 30.3 bits (65), Expect = 0.91
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 244 SSDKKTRIPEPPAPISG-HGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLP 408
+S T PPA S +G+ + S PPS F + PT ++ + PP+DLP
Sbjct: 124 ASTSSTAYSPPPATSSTTYGSSIPSTYPPS---TFAPSAYPTSSSWGSTHPPEDLP 176
>AL023835-8|CAA19491.1| 483|Caenorhabditis elegans Hypothetical
protein Y37A1B.8 protein.
Length = 483
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 525 YHSFTFTPRYGWAKFFCFCCWICSL 451
+ + TF P+ W+ F FCC+ C L
Sbjct: 97 FTNITFFPKSEWSDQFEFCCYTCKL 121
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILV 447
P PPAP+ + P +P + ++P PA +Q+ P P+ P P P
Sbjct: 197 PPPPAPMP-----VPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPVEPSDPAPPSKLPSPS 251
Query: 448 QQRADPAAETEKF 486
+ D A +++F
Sbjct: 252 KSCTDLAGGSQRF 264
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Frame = +1
Query: 283 PISGHGNLLSSVAPPSQL------PNFITAVSPT-PANLQNHLPPQDLPATPHPVPVQPI 441
P+S +G ++++ PP P F P P N Q PP P P +P +
Sbjct: 177 PVSSNGMNVTAIPPPPSFNINPFQPMFSQPPPPPLPPNSQFMTPPPRPPPAPFSIPPPSV 236
Query: 442 LVQQRADPAAETEKFSPAIPWSKGEAMVSVR 534
+ A + P P + G A S R
Sbjct: 237 DIHFAATASFSLSSIPPPPPQTDGGASSSKR 267
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 238 NMSSDKKTRIPEPPAPISGHGNLLSSVAPPSQLP-NFITAVSPTPANLQNHLPPQDLPAT 414
++++D +PE P S L V P +P NF P Q+H LP
Sbjct: 442 DLAADIPIEMPESPGARSV-APLGDVVEPAPMIPLNFSRNPKPMMPEPQSH-DDIPLPVN 499
Query: 415 PHPVPVQPILVQQRADPAAETEKFSPA 495
V P ++QQ+ + A+ E+F P+
Sbjct: 500 KSRNTVPPPVMQQKPNNASNNEEFDPS 526
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 266 FLNLQHLFLVMATCYLV*---HHRRSFPTSLLLFRLLQRIYRITCLHKICLLHHTQYPFN 436
FL+L F+ +A +L+ HH P LL F L ++R T + C+ + FN
Sbjct: 188 FLSLFLFFVSIAMTFLISRFQHHLTWQPAVLLYFDCLLAVFRSTYILFRCISSSRVFSFN 247
Query: 437 P 439
P
Sbjct: 248 P 248
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 266 FLNLQHLFLVMATCYLV*---HHRRSFPTSLLLFRLLQRIYRITCLHKICLLHHTQYPFN 436
FL+L F+ +A +L+ HH P LL F L ++R T + C+ + FN
Sbjct: 188 FLSLFLFFVSIAMTFLISRFQHHLTWQPAVLLYFDCLLAVFRSTYILFRCISSSRVFSFN 247
Query: 437 P 439
P
Sbjct: 248 P 248
>Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical
protein ZK662.3b protein.
Length = 817
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 286 ISGHGNLLSSVAP--PSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 438
+S ++ +V P P P FI PTP N+ P +TP P P+ P
Sbjct: 389 VSNMAPVMPTVNPLDPLLAPAFIAPPMPTPINVPITTPIAGALSTPLPPPIVP 441
>Z79604-2|CAB01900.1| 780|Caenorhabditis elegans Hypothetical
protein ZK662.3a protein.
Length = 780
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 286 ISGHGNLLSSVAP--PSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 438
+S ++ +V P P P FI PTP N+ P +TP P P+ P
Sbjct: 352 VSNMAPVMPTVNPLDPLLAPAFIAPPMPTPINVPITTPIAGALSTPLPPPIVP 404
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTP 369
P+P AP+ G+L+ + P +LPN + AV P
Sbjct: 569 PDPSAPVVPSGDLIIA-TPDPELPNIVAAVPFIP 601
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTP 369
P+P AP+ G+L+ + P +LPN + AV P
Sbjct: 591 PDPSAPVVPSGHLIVA-TPDPELPNIVAAVPFIP 623
>AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear receptor
NHR-48 protein.
Length = 817
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 286 ISGHGNLLSSVAP--PSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 438
+S ++ +V P P P FI PTP N+ P +TP P P+ P
Sbjct: 389 VSNMAPVMPTVNPLDPLLAPAFIAPPMPTPINVPITTPIAGALSTPLPPPIVP 441
>AF332204-1|AAK17975.1| 519|Caenorhabditis elegans nuclear receptor
NHR-48 protein.
Length = 519
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 286 ISGHGNLLSSVAP--PSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 438
+S ++ +V P P P FI PTP N+ P +TP P P+ P
Sbjct: 91 VSNMAPVMPTVNPLDPLLAPAFIAPPMPTPINVPITTPIAGALSTPLPPPIVP 143
>Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical
protein T28D6.4 protein.
Length = 991
Score = 28.3 bits (60), Expect = 3.7
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +1
Query: 202 KK*SEVKYKV*FNMSSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNF--ITAVSPTPAN 375
+K SEV V + S + + EPP I G L P LP +T + T +
Sbjct: 53 RKLSEVSECVASHFCSHDEPQSSEPPTVIRSLGEQLMRRFPNLVLPRLTTVTLLEDTVSA 112
Query: 376 LQN--HLPPQDLPATPHPV 426
L + LP + +P+T PV
Sbjct: 113 LDHFLRLPLETMPSTSKPV 131
>AF067937-4|AAF99911.2| 352|Caenorhabditis elegans Hypothetical
protein F22F7.6 protein.
Length = 352
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = -2
Query: 306 QVAMTRNRCWRFRNPRLFIRTHVELYFIFHFTSLLMRMA 190
Q+ + CW+FR + ++R+H+ F + ++L+ +A
Sbjct: 102 QIPASDRTCWKFRADQSYLRSHLSGPFQLYPSNLMRNLA 140
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 27.9 bits (59), Expect = 4.8
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 6/97 (6%)
Frame = +1
Query: 262 RIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQ---NHLPPQ-DLPATPHPVP 429
+IPE P + ++ P P SP PA +PP PA P P P
Sbjct: 303 QIPEASEPTEAEADAPTTFILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPP 362
Query: 430 VQPILVQQRADPAAETEKFSP--AIPWSKGEAMVSVR 534
P + A+ + FSP ++ + + M ++R
Sbjct: 363 PPPPPPPPQTPSASSSVTFSPTKSVDGGRSDLMAAIR 399
>Z47745-3|CAA87666.1| 313|Caenorhabditis elegans Hypothetical
protein T19H5.4 protein.
Length = 313
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 286 ISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPIL 444
IS H +LLS +APP+ P F N PP++ A P + V P+L
Sbjct: 67 ISMHLSLLSQLAPPNFSPFFFF--------FSNRSPPKERRANPKALCVLPLL 111
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 322 PPSQLPNFITAVSPTPANLQNHLP-PQDLPATPHPVPVQPILVQQRADPAAETEK 483
P SQ+ + A PT + N + +D+PA P P P + R P E ++
Sbjct: 116 PSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPPPEYDE 170
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 322 PPSQLPNFITAVSPTPANLQNHLP-PQDLPATPHPVPVQPILVQQRADPAAETEK 483
P SQ+ + A PT + N + +D+PA P P P + R P E ++
Sbjct: 757 PSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPPPEYDE 811
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 322 PPSQLPNFITAVSPTPANLQNHLP-PQDLPATPHPVPVQPILVQQRADPAAETEK 483
P SQ+ + A PT + N + +D+PA P P P + R P E ++
Sbjct: 757 PSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPPPEYDE 811
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 322 PPSQLPNFITAVSPTPANLQNHLP-PQDLPATPHPVPVQPILVQQRADPAAETEK 483
P SQ+ + A PT + N + +D+PA P P P + R P E ++
Sbjct: 757 PSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPPPEYDE 811
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 325 PSQLPNFITAVSPTPANLQNHLP-PQDLPATPHPVPVQPILVQQRADPAAETEKFSPAIP 501
P+ +P F+ ++ P P LP P D P P P+ +L D E IP
Sbjct: 489 PAPVPKFLNSILPPPPAPPQFLPNPTDSFRPPTPPPLPSVLYVPNKDQMILKEPKDIPIP 548
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 27.9 bits (59), Expect = 4.8
Identities = 23/86 (26%), Positives = 31/86 (36%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILV 447
P PP P ++L PP P T +P P + P TP P P +
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPTPRPKE---C 123
Query: 448 QQRADPAAETEKFSPAIPWSKGEAMV 525
P E + + + WSK A V
Sbjct: 124 PTSFLPKKEKKTKTRTVQWSKINASV 149
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/69 (23%), Positives = 29/69 (42%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 453
PP P+ + A P +P ++ + P P ++ +PP A VP P+
Sbjct: 100 PPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPPVQSTA 159
Query: 454 RADPAAETE 480
+ P+ +E
Sbjct: 160 QPPPSGTSE 168
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/69 (23%), Positives = 29/69 (42%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 453
PP P+ + A P +P ++ + P P ++ +PP A VP P+
Sbjct: 123 PPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPPVQSTA 182
Query: 454 RADPAAETE 480
+ P+ +E
Sbjct: 183 QPPPSGTSE 191
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/69 (23%), Positives = 29/69 (42%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 453
PP P+ + A P +P ++ + P P ++ +PP A VP P+
Sbjct: 373 PPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPPVQSTA 432
Query: 454 RADPAAETE 480
+ P+ +E
Sbjct: 433 QPPPSGTSE 441
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 325 PSQLPNFITAVSPTPANLQNHLPPQDLPA-TPHPVP--VQPILVQQRADPAAET 477
PSQ + + + P P++L +LPP PA P P P+ Q+ P +E+
Sbjct: 246 PSQFSSTVP-LPPAPSSLIQNLPPPPQPAFLPQPPTSYAPPVAATQQQPPVSES 298
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 388 LPPQDLPATPHPVPVQPI 441
LPP P P P PVQPI
Sbjct: 517 LPPPPPPPKPKPAPVQPI 534
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNF--ITAVSPTPANLQNHLPPQDLPATPHPVPV 432
P PP P+ G + ++ PP +P ++ +PTP P P P+P+
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPL 559
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 388 LPPQDLPATPHPVPVQPI 441
LPP P P P PVQPI
Sbjct: 517 LPPPPPPPKPKPAPVQPI 534
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQ-NHLPPQDLPATPHPVPVQPILVQ 450
PP P + S PP+ + V PTP + + +PP A P VP+ P
Sbjct: 296 PPTPKTAASEKQS--VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAA 353
Query: 451 QRADP 465
Q + P
Sbjct: 354 QSSVP 358
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQ-NHLPPQDLPATPHPVPVQPILVQ 450
PP P + S PP+ + V PTP + + +PP A P VP+ P
Sbjct: 246 PPTPKTAASEKQS--VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAA 303
Query: 451 QRADP 465
Q + P
Sbjct: 304 QSSVP 308
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQ-NHLPPQDLPATPHPVPVQPILVQ 450
PP P + S PP+ + V PTP + + +PP A P VP+ P
Sbjct: 296 PPTPKTAASEKQS--VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAA 353
Query: 451 QRADP 465
Q + P
Sbjct: 354 QSSVP 358
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQ-NHLPPQDLPATPHPVPVQPILVQ 450
PP P + S PP+ + V PTP + + +PP A P VP+ P
Sbjct: 296 PPTPKTAASEKQS--VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAA 353
Query: 451 QRADP 465
Q + P
Sbjct: 354 QSSVP 358
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 6.4
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Frame = +1
Query: 256 KTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPA-NLQNHL---PPQDLPAT--P 417
+T P P+P S +S P LP ++ SP+PA N+ + P PAT P
Sbjct: 389 ETETPSAPSPASPSS--VSVTIPRVALPASVSVPSPSPASNVPVTITLSAPAKSPATYGP 446
Query: 418 HPVPVQPILVQQRADPAAETEKFSPAIP 501
P P +P + P+ P+ P
Sbjct: 447 APEPSRPAVPPVAPAPSVIPTSSQPSQP 474
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/62 (24%), Positives = 20/62 (32%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILV 447
P PP +G + PP+ +T V P PP P V +
Sbjct: 1001 PTPPHVPTGRPTTVGQAQPPASSSRRVTEVGPPAPRTTEAAPPAPSSQPPRQFAVNTLQH 1060
Query: 448 QQ 453
QQ
Sbjct: 1061 QQ 1062
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 262 RIPEPPAPISGHGNLLSSVAP-PSQLPNFITAVSPTPA 372
++P P P+ GN + AP P +P PTP+
Sbjct: 736 KVPPPEPPVDYEGNAKENAAPSPVPVPKISQKPVPTPS 773
>Z75549-1|CAA99917.1| 424|Caenorhabditis elegans Hypothetical
protein T19C4.1 protein.
Length = 424
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +1
Query: 391 PPQDLPATPHPVPVQ------PILVQQRADPAAETEKFSPAIPW 504
PP +P+ HPVP+ P +++Q+ P A T + + P+
Sbjct: 211 PPSAVPSMGHPVPLSQMGAFVPPMLEQKPSPRAVTAQLAIRTPY 254
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical protein
ZK287.4 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 8.5
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Frame = +1
Query: 286 ISGHGNLLSSVAPPSQLPNFITAVSPTPANL----QNHLPPQDLPATPH-----PVPVQP 438
+S H +LLS S P + TP NL +HL P+ +PA P P+P P
Sbjct: 832 MSVHTHLLSCNFE-SDCPYSHDCIQSTPHNLCCPKTSHLVPESIPAPPFEPVQMPIPAPP 890
Query: 439 ILVQQ 453
V Q
Sbjct: 891 AQVSQ 895
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 27.1 bits (57), Expect = 8.5
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = +1
Query: 274 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 453
PPAP+ + + AP P + A P P P A P P PV PI+
Sbjct: 72 PPAPLLAPPAPVLAAAPAFAAPAPVFAAPPAPV----LAAPAPFLAPPVP-PVAPIVSAF 126
Query: 454 RADPAAETEKFSPA 495
P F+PA
Sbjct: 127 APRPVLAAPAFAPA 140
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.1 bits (57), Expect = 8.5
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 247 SDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPV 426
S T P P P + + + +P Q P ++ P P L P +P P P
Sbjct: 460 SYSSTTPPTTPKPAPPPPSRIPNPSPSPQ-PAEVSKSPPPPPPLPPIATPSSVPPPPPPP 518
Query: 427 PVQPILVQQ 453
P P ++Q
Sbjct: 519 PPPPPALEQ 527
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 361 PTPANLQNHLPPQDLPATPHPVPVQPILVQQRADPAAE--TEKFSPAIPWSK 510
P P + P + P P P+ V+P++ ++ + E E P +P S+
Sbjct: 719 PEPVVSEELKPTEPEPVEPEPMEVEPVVAKEVVEEVVEEVVETQEPWVPLSE 770
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 268 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDL 405
P P P+S +L A PS P F+ + P PA +PP+ +
Sbjct: 171 PPPVPPLSPLYKVLEIPATPS--PIFVAPLPPPPAYTTPDVPPEPM 214
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 250 DKKTRIPEP-PAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPV 426
D++ +P P P+P+ + PP + P +P P ++ PP PA P P+
Sbjct: 530 DQELILPSPEPSPVRE-----PTPPPPPREPT-PREPTPEPEPVREPTPPPPPPAKPRPL 583
Query: 427 PVQPILVQQR 456
I Q+R
Sbjct: 584 TAAEIAAQKR 593
>AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic
multivulva protein LIN-35 Rb protein.
Length = 961
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 284 LFLVMATCYLV*HHRRSFPTSL----LLFRLLQRIYRITCLHKICLLHHTQYPF 433
LF V+ T +LV R + + LLF +L ++Y C K ++HH F
Sbjct: 280 LFTVLWTSFLVMKSRMTVDDLISNYQLLFSILDQVYTEMCSMKEGIVHHLNQKF 333
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.1 bits (57), Expect = 8.5
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 235 FNMSSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDL-PA 411
F+ S P PP P + L+ V PP P ++ +PT L PP P+
Sbjct: 1328 FSTSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSK-APTGVPLPVPPPPPLFSPS 1386
Query: 412 TPHPVPVQPILVQQRADP 465
P P P+ +++ +P
Sbjct: 1387 MILPPPPPPLPSEEKKNP 1404
>AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell
lineage protein 35 protein.
Length = 961
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 284 LFLVMATCYLV*HHRRSFPTSL----LLFRLLQRIYRITCLHKICLLHHTQYPF 433
LF V+ T +LV R + + LLF +L ++Y C K ++HH F
Sbjct: 280 LFTVLWTSFLVMKSRMTVDDLISNYQLLFSILDQVYTEMCSMKEGIVHHLNQKF 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,310,951
Number of Sequences: 27780
Number of extensions: 273472
Number of successful extensions: 1128
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -