Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G05
(480 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 261 5e-69
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 260 2e-68
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 232 3e-60
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 184 7e-46
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 182 3e-45
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 179 3e-44
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 164 1e-39
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 155 6e-37
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 128 6e-29
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 126 2e-28
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 125 6e-28
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 121 7e-27
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 120 2e-26
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 120 2e-26
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 116 2e-25
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 114 8e-25
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 111 6e-24
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 101 8e-21
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 99 3e-20
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 70 3e-20
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 99 6e-20
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 86 3e-16
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 85 1e-15
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 85 1e-15
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 78 1e-13
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 77 2e-13
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 77 2e-13
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 75 6e-13
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 75 8e-13
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 74 2e-12
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 73 4e-12
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 71 1e-11
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 69 5e-11
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 69 7e-11
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 66 4e-10
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 64 2e-09
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 63 3e-09
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 61 1e-08
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 61 1e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 3e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 3e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 60 3e-08
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 57 2e-07
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 57 2e-07
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 56 5e-07
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 54 2e-06
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 53 4e-06
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 52 9e-06
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 50 4e-05
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 49 6e-05
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 47 2e-04
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 45 0.001
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 44 0.001
UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protei... 34 1.9
UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Re... 34 1.9
UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole... 33 4.4
UniRef50_Q5KPR7 Cluster: Expressed protein; n=1; Filobasidiella ... 33 4.4
UniRef50_UPI00005874CE Cluster: PREDICTED: similar to OTTHUMP000... 32 5.8
UniRef50_A6GTP1 Cluster: Putative transcriptional regulator; n=1... 32 5.8
UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6; ... 32 5.8
UniRef50_Q9XJT6 Cluster: Terminase; n=2; root|Rep: Terminase - B... 32 5.8
UniRef50_UPI0000EFD0F5 Cluster: hypothetical protein An18g01440;... 32 7.7
UniRef50_A6C829 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_A5ARJ7 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_Q9HF59 Cluster: Cdc24; n=2; Saccharomycetaceae|Rep: Cdc... 32 7.7
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 261 bits (640), Expect = 5e-69
Identities = 123/157 (78%), Positives = 139/157 (88%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHI 189
+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI
Sbjct: 23 DYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHI 82
Query: 190 KGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALS 369
+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL
Sbjct: 83 RGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALG 142
Query: 370 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 143 ITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 260 bits (636), Expect = 2e-68
Identities = 122/157 (77%), Positives = 139/157 (88%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHI 189
++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTMMRKAI+ HLE NPALE+LLPHI
Sbjct: 23 DFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALERLLPHI 82
Query: 190 KGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALS 369
+GNVGFVFT+ DL +VRD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL
Sbjct: 83 RGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALG 142
Query: 370 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
I TKIS+GTIEI++DV ++KPGDKVGASEATLLNMLN
Sbjct: 143 ITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLN 179
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 232 bits (568), Expect = 3e-60
Identities = 107/156 (68%), Positives = 133/156 (85%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHI 189
EY + +V DNVGS+QMQQIRISLRG + +LMGKNT +RKA++ HLE NP LEK+LPH+
Sbjct: 23 EYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTTIRKALRGHLEQNPNLEKVLPHV 82
Query: 190 KGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALS 369
KGN+GFVFT D+VD+R+ +L N+V APA+ GAIAP+ V +PA NTGLGPEKTSFFQALS
Sbjct: 83 KGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVDVFVPASNTGLGPEKTSFFQALS 142
Query: 370 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
I TKIS+GTIEI+++VH++K G+KVGASEATLL ML
Sbjct: 143 IATKISRGTIEILSEVHLIKIGEKVGASEATLLQML 178
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 184 bits (449), Expect = 7e-46
Identities = 89/158 (56%), Positives = 118/158 (74%), Gaps = 2/158 (1%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLP 183
EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM+++++ H E N A+ LLP
Sbjct: 23 EYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNLLP 82
Query: 184 HIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 363
++GNVG +FT+GDL +V +++ + KV APAR G +AP+ VV+ NTGL P +TSFFQ
Sbjct: 83 LLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQV 142
Query: 364 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L
Sbjct: 143 LNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 182 bits (444), Expect = 3e-45
Identities = 88/158 (55%), Positives = 117/158 (74%), Gaps = 2/158 (1%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLP 183
EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM+++++ H + N A LLP
Sbjct: 24 EYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFLSLLP 83
Query: 184 HIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 363
++GNVG +FT+GDL +V +++ + KV APAR G +AP+ VV+ NTGL P +TSFFQ
Sbjct: 84 LLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQV 143
Query: 364 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L
Sbjct: 144 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKL 181
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 179 bits (435), Expect = 3e-44
Identities = 86/156 (55%), Positives = 113/156 (72%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHI 189
EY + +V DNVGS Q Q IR LRG +MGKNT++RKAIK+ ET P LE+LLPHI
Sbjct: 30 EYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTLIRKAIKNQAETQPELEELLPHI 89
Query: 190 KGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALS 369
KGNVGF+FT+GDL ++ KL E K +PA+ G IAP V++PA +TGL P +T+F QAL+
Sbjct: 90 KGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPNDVIVPAGDTGLDPTQTNFVQALN 149
Query: 370 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
I +KI+KG IEI ++ ++K G+KVG S+A LL L
Sbjct: 150 IASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKL 185
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 164 bits (398), Expect = 1e-39
Identities = 83/158 (52%), Positives = 108/158 (68%), Gaps = 1/158 (0%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHI 189
+Y K IV DNVGS QM +R SLRG + +LMGKNT +R A+K +L+ P +EKLLP +
Sbjct: 23 QYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIEKLLPLV 82
Query: 190 KGNVGFVFTRGDLVDVRDKLLENKVQA-PARPGAIAPLSVVIPAHNTGLGPEKTSFFQAL 366
K N+GFVF + DL ++R+ +L+NK + PAR G IAP+ V IP TG+ P TSF ++L
Sbjct: 83 KLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESL 142
Query: 367 SIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
I TKI KG IEI VH++K G+KV AS ATLL N
Sbjct: 143 GISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFN 180
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 155 bits (375), Expect = 6e-37
Identities = 76/156 (48%), Positives = 105/156 (67%)
Frame = +1
Query: 13 YPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIK 192
Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D ++ P L+ L ++K
Sbjct: 23 YDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALNTYLK 82
Query: 193 GNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSI 372
N +F + ++ +V+ + +V APA+ G AP V+IPA TG+ P +TSF Q L I
Sbjct: 83 QNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKI 142
Query: 373 PTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
TKI++G I+I+N+VHI+K G KVGASEATLL LN
Sbjct: 143 ATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLN 178
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 128 bits (309), Expect = 6e-29
Identities = 71/166 (42%), Positives = 103/166 (62%), Gaps = 9/166 (5%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPA--LEKLLP 183
+Y + DNV SQQ+ +R LRG ++MGK T+ +K ++ E A +KLL
Sbjct: 21 KYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLY 80
Query: 184 H-------IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPE 342
+ + GN +FT ++ + L +++VQAPAR GAIAP V++PA NTG+ P+
Sbjct: 81 NTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGMEPK 140
Query: 343 KTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
TSFFQAL+I TKI+KGT+EI++D +L GD+V S ATLL L+
Sbjct: 141 ATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLD 186
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 126 bits (305), Expect = 2e-28
Identities = 72/156 (46%), Positives = 98/156 (62%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHI 189
EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I + L+ + L+ LLP+I
Sbjct: 26 EYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI-NQLDDDK-LKNLLPYI 83
Query: 190 KGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALS 369
K NV FVFT GD + + K +A A+ G +AP VVI T GP++ F+ AL
Sbjct: 84 KLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEPMLTQSGPDQHGFYAALG 143
Query: 370 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
I TKI+KG IEI+N V+++K GD V S ATLL L
Sbjct: 144 IDTKINKGKIEIVNPVNLIKKGDIVTPSHATLLQRL 179
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 125 bits (301), Expect = 6e-28
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 18/174 (10%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIR-ISLRGHSIVLMGKNTMMRKAIKDHLETNPA------- 165
+Y + IVG NVGS+Q+Q IR I + ++++++GKNT+ +K + ++ P
Sbjct: 23 KYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNTLFKKVLATRVQELPKEHEYYED 82
Query: 166 ----------LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 315
L+ L + G VGF+FT + D++ + ENKV+ PAR GA+AP+ VVIP
Sbjct: 83 LAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIP 142
Query: 316 AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
TG+ P FF AL IPTKI KG I+I D +LK G KVG S+A LL L
Sbjct: 143 PGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKL 196
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 121 bits (292), Expect = 7e-27
Identities = 72/173 (41%), Positives = 101/173 (58%), Gaps = 17/173 (9%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL-ETN--------- 159
E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L E N
Sbjct: 16 EAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRLTEPNAEDEDFEKR 75
Query: 160 -------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 318
P LE L+P ++GNV +F ++ +V + E+KV A A+ G IAP V +
Sbjct: 76 KNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPNDVHVYP 135
Query: 319 HNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
TG+ P +TSFFQAL I TKI KG I+I+N++H++ KVG SEA LL L
Sbjct: 136 GPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKL 188
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 120 bits (289), Expect = 2e-26
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 18/175 (10%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDHL------ETN--- 159
+Y + +V DN+ ++Q+ R LR + S++LMG+NT+++ A++ + E++
Sbjct: 23 KYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENTLIKAALQKRISKPIESESDFEE 82
Query: 160 --------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 315
P +E L+ +KGN+G +FT DL D++D + + +APAR G++A V I
Sbjct: 83 RSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIK 142
Query: 316 AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
A TGL P++T+FFQ L+IPTKI+K IEI D I+ G+KVG++EA LL LN
Sbjct: 143 AGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLN 197
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 120 bits (289), Expect = 2e-26
Identities = 66/156 (42%), Positives = 99/156 (63%)
Frame = +1
Query: 13 YPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIK 192
Y + +V +NV S Q++ I+ G++ +LMGKN+ +R+AI D P L + +K
Sbjct: 48 YSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSAIRRAIADL--GKPELSGVYDLVK 105
Query: 193 GNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSI 372
G+V FVF +G+ D++ + EN +A A+ G +A V + + TG+ P+KTS+FQAL I
Sbjct: 106 GDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGI 165
Query: 373 PTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
TKI+KG +EII+ +L GDKVG S+A LL MLN
Sbjct: 166 ATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLN 201
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 116 bits (280), Expect = 2e-25
Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 16/173 (9%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK---DHLETN------- 159
+Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA++ L T+
Sbjct: 25 KYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKAVQLKSADLPTDSKYDWYR 84
Query: 160 ------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 321
P L L+PH+K + +VF + ++ K+ V APAR G +A V+IP
Sbjct: 85 QFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPG 144
Query: 322 NTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
TG+ P + +FF ALSI TKI KG IEI +V + G K+G SE +LL +N
Sbjct: 145 PTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKGKKIGNSEVSLLEKMN 197
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 114 bits (275), Expect = 8e-25
Identities = 55/157 (35%), Positives = 94/157 (59%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHI 189
++ + +V +N+ S+Q+++ + L SI++ GKNT+++K ++D L+ + ++L I
Sbjct: 22 KFSRLIVVKIENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRLKNSTLSNEILTKI 81
Query: 190 KGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALS 369
GNV F+FT D +++ L N + A+ G +A V + T + P+ FQ+L+
Sbjct: 82 NGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTNISPDGIGIFQSLN 141
Query: 370 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
IPTKI KG IEII + +L+ G K+ +EATLL LN
Sbjct: 142 IPTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLN 178
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 111 bits (268), Expect = 6e-24
Identities = 59/157 (37%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSI-VLMGKNTMMRKAIKDHLETNPALEKLLPH 186
+Y K +V + NV + Q+ IR L H VL GKN++MR+A+ E P + +L H
Sbjct: 24 KYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQLKEELPGIRQLEEH 83
Query: 187 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQAL 366
+ G +FT G+ ++D + N + + A+ GAIAP V++ T + P AL
Sbjct: 84 LYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRTSMSPNDIKILHAL 143
Query: 367 SIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
+I KI KGTIEI + ++ G KVGASEA +LN+L
Sbjct: 144 NIQCKIFKGTIEITGEKQLIWEGQKVGASEANILNIL 180
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 101 bits (242), Expect = 8e-21
Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDHLETNPALEKLLPH 186
EY +V + + + Q+Q+IR LR +I+ M +NT+MR A+++ L+ P LE LL +
Sbjct: 34 EYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALEEKLDERPELEPLLDY 93
Query: 187 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQA 363
I+G V F+FT D + L E+K APA+PG IAP +V+P T P S Q
Sbjct: 94 IEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQ 153
Query: 364 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
+P +I G + I D ++K G+++ A +L L
Sbjct: 154 AGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKL 191
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 99 bits (238), Expect = 3e-20
Identities = 59/132 (44%), Positives = 69/132 (52%)
Frame = -2
Query: 398 IVPFEILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 219
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 218 RVKTKPTFPLM*GSSFSRAGFVSRWSLMAFLIMVFLPMSTML*PRNEXXXXXXXCEPTLS 39
VKTKPT PL G++FS++G + LMA L MVFLP+ T P N E TLS
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLS 120
Query: 38 APTMKHFGYSPR 3
PT YS +
Sbjct: 121 TPTTNKDLYSSK 132
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 70.1 bits (164), Expect(2) = 3e-20
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +1
Query: 127 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 264
++AI+ HLE N L KLLPHIK VGFVFT+GDLV+VRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 50.0 bits (114), Expect(2) = 3e-20
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 361 ALSIPTKISKGTIEIINDVHILKPGDKV 444
ALSIP KISKGTIEIINDV ILK GDK+
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKI 765
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 98.7 bits (235), Expect = 6e-20
Identities = 57/157 (36%), Positives = 82/157 (52%)
Frame = -1
Query: 480 VQHVEKSSFRSSHLITRLQDMDIIDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDR 301
VQ V++ SFRS+ +T + D+++ DNFN T NL + +SLEERSL V N D
Sbjct: 148 VQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDI 207
Query: 300 QWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDGFPHH 121
W N + + + V I + GED+ N++LD R+Q F W D H
Sbjct: 208 FWGNSTSSGWSGNLVGDDDFLDILQGIVGEDETNVTLDERQQLFVVWEVRDETSDSSSDH 267
Query: 120 GVFAHEHNAVTTQ*NTDLLHLLRAYIVRTHYETFWVF 10
GV H+ N+ +Q +D +HLL +IV T+ E VF
Sbjct: 268 GVLTHQDNSSASQVLSDFVHLLGRHIVNTNNEDRLVF 304
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 86.2 bits (204), Expect = 3e-16
Identities = 46/156 (29%), Positives = 82/156 (52%)
Frame = +1
Query: 13 YPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIK 192
Y IV +N+ S+Q+ IR LRG S +++GK + + ++++ + ++
Sbjct: 19 YDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRWMSVKEYLS 78
Query: 193 GNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSI 372
N+G +FT +L + + + + + G IA +++I L P +T FFQAL I
Sbjct: 79 DNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQALGI 138
Query: 373 PTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
PT+ISK +IEII D+ ++ + S+ LL L+
Sbjct: 139 PTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLD 174
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 84.6 bits (200), Expect = 1e-15
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Frame = +1
Query: 52 SQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL--ETNPALEKLLPHIKGNVGFVFTRGD 225
+ + Q R LRGH +V + +N + A++ N +EK ++ G GF+FT +
Sbjct: 49 ASMLHQYRRVLRGHGVVKVFRNKLFLIALRRIYGDSVNAEIEK---YLSGENGFIFTNEN 105
Query: 226 LVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIE 402
D+ +++N V+ A+PG + +++PA NTG+ P S F L IPT+I G I
Sbjct: 106 PFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGINPGPVLSRFSKLKIPTQIRDGKIW 165
Query: 403 IINDVHILKPGDKVGASEATLLNMLN 480
+ D + KPGD V A LL ++N
Sbjct: 166 VARDTQVAKPGDTVTPELADLLRLIN 191
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 84.6 bits (200), Expect = 1e-15
Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Frame = +1
Query: 13 YPKCFIVGADNVGSQQMQQIRISLRGHSIVL-MGKNTMMRKAIKDHLET--NPALEKLLP 183
YP +V ++ + + Q+R +R + +L + +NT++ AIK + P LEKL+
Sbjct: 22 YPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVE 81
Query: 184 HIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQ 360
+I G + T + + L +N+ APA+PGA+ P VV+PA T L P Q
Sbjct: 82 YIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQ 141
Query: 361 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
AL IP +I KG + I D +LK G+ + A +LN L
Sbjct: 142 ALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNAL 180
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 77.8 bits (183), Expect = 1e-13
Identities = 41/156 (26%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Frame = +1
Query: 13 YPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIK 192
Y +V + S+Q+Q +R L G + + M +NT++ +A++ E L+ L +++
Sbjct: 30 YDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRALE---EAGDGLDTLTEYVE 86
Query: 193 GNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALS 369
G VG V T + + +L +K AP G +AP +V+P +TG+ P Q +
Sbjct: 87 GEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIG 146
Query: 370 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
+I +G+I++++D + + G+ V + +L+ L
Sbjct: 147 ANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSEL 182
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 77.4 bits (182), Expect = 2e-13
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Frame = +1
Query: 28 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 207
+V +++ + Q+ +R LR K+ + RKA+ P ++K++ + G F
Sbjct: 17 LVRMESIRASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMF 74
Query: 208 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 381
+FT + L +NK AR G IA + V +PA NTG+ GP T F +A IPTK
Sbjct: 75 MFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTK 133
Query: 382 ISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
I +GTI I+ D +K G+ +G A LL L+
Sbjct: 134 IDQGTIWILKDTTPVKKGEPIGDKLAPLLGKLD 166
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 77.0 bits (181), Expect = 2e-13
Identities = 44/151 (29%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 207
IV ++ ++Q+Q +R SL ++I+ M + ++ A+++ +E L +++G
Sbjct: 27 IVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALEN--SDKEEVEGLADYLEGQPAM 84
Query: 208 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKI 384
VFT+ + + L ++K +APA+ G+IAP +V+PA +T P Q + IP KI
Sbjct: 85 VFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKI 144
Query: 385 SKGTIEIINDVHILKPGDKVGASEATLLNML 477
KG+I + +D I+ G+++ + A +L L
Sbjct: 145 DKGSIVVTDDAKIVDEGEEIPKAVADILTKL 175
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 75.4 bits (177), Expect = 6e-13
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHI 189
+YP F+ + S+ + + R LR + ++ + K T+ + A PA ++ +
Sbjct: 33 KYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EIAEKV 90
Query: 190 KGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQAL 366
+G VGF FT + +V + EN V+ A+PG AP +V+PA T P S F L
Sbjct: 91 RGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGKL 150
Query: 367 SIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
IPT++ +G I I D + K G ++ A +L ++
Sbjct: 151 KIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRVV 187
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 74.9 bits (176), Expect = 8e-13
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Frame = +1
Query: 46 VGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTR 219
V + Q+Q+IR +R + M +NT++++A+++ E NP KL+ ++ V T
Sbjct: 39 VPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTE 98
Query: 220 GDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGT 396
+ + L E+K AP + GAIAP + + + +TG+ P S +A+ IP I KG
Sbjct: 99 MNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGK 158
Query: 397 IEIINDVHILKPGDKVGASEATLLNML 477
I I D + K GD + A +L+ L
Sbjct: 159 IGIKEDKVVAKEGDVISPKLAVVLSAL 185
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 73.7 bits (173), Expect = 2e-12
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +1
Query: 94 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP 273
S++ + KNT+ A+K+ T +E + H++G +FT + ++ L + K+
Sbjct: 59 SLMKVVKNTIFLLALKN---TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMRE 115
Query: 274 ARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 450
AR G IA +V+PA NTG+ P S F L IPT++ +G+I I D + KPGD +
Sbjct: 116 ARAGDIATSEIVLPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISP 175
Query: 451 SEATLLNML 477
A LL+ L
Sbjct: 176 ELAELLSKL 184
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 72.5 bits (170), Expect = 4e-12
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHI 189
+Y I+ + V S Q+ +R +L+ K+ + +KA+++ P ++ ++
Sbjct: 25 KYKVMAIIKMNKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALEN--SDIPGMKDMIGEF 82
Query: 190 KGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQA 363
KG V +FT + L +NK+ AR G IA + VV+PA NTG+ GP T F +A
Sbjct: 83 KGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAPGPMLTEFKEA 142
Query: 364 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
IPTKI +GTI I D + G+ + A +L L+
Sbjct: 143 -GIPTKIDQGTIWIAKDSTPVLKGEAINEKLAAILGKLD 180
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 70.9 bits (166), Expect = 1e-11
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Frame = +1
Query: 52 SQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 231
+ ++ +IR LRG + + + KNT+ + A K+ +EKL ++ G F+FT+ D
Sbjct: 44 ADKLHEIRKKLRGKATIKVTKNTLFKIAAKN---AGIDIEKLEQYLTGPNVFIFTK-DNP 99
Query: 232 DVRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIE 402
+ + EN K++ A PG A VVIPA +TG+ GP S F L + TK+ G +
Sbjct: 100 FITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAGPI-LSVFGKLKVQTKVQDGKVH 158
Query: 403 IINDVHILKPGDKVGASEATLLNML 477
++ D + KPGD + A +L L
Sbjct: 159 VVKDTVVAKPGDVIPAEALPILQKL 183
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 68.9 bits (161), Expect = 5e-11
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Frame = +1
Query: 13 YPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIK 192
YP I + Q+Q++R L + + KN ++ +A+++ E+LL
Sbjct: 30 YPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNAGIDTSKFEELLT--- 86
Query: 193 GNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALS 369
G +FT + ++ L + K + +PG IA +VIP NTGL P S F L
Sbjct: 87 GQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLK 146
Query: 370 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
IPT+I +I I D + KPGD + A+LL L+
Sbjct: 147 IPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLD 183
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 68.5 bits (160), Expect = 7e-11
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Frame = +1
Query: 112 KNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 291
KN ++RKA + P +++ + G+ F+FT + + K+ + + APA+PG +
Sbjct: 68 KNNLVRKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDV 125
Query: 292 APLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 468
A +V+PA +TGL P S F L I T + GTI I D + KPGD + A+LL
Sbjct: 126 AQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLL 185
Query: 469 NML 477
L
Sbjct: 186 QKL 188
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 66.1 bits (154), Expect = 4e-10
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Frame = +1
Query: 13 YPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALE--KLLPH 186
Y +++ + N+ S QQ+R S++G++ + MGKN +MR A+ E + + +L
Sbjct: 47 YDTVYVIDSHNMTSSSWQQLRTSMKGYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRL 106
Query: 187 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSF---- 354
+KG G +FT VR L AR G +A ++VIP L +K SF
Sbjct: 107 LKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP--QGPLDRDKYSFALEP 164
Query: 355 -FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 468
+ L +PT + I ++ D + K GD + +++A LL
Sbjct: 165 ELRKLGLPTSLQNTVIHVLCDHVLCKEGDVLTSAQARLL 203
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 63.7 bits (148), Expect = 2e-09
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Frame = +1
Query: 7 GEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KDHLETNPALEKLL 180
G+YP F+ N+ + ++ +R L+ +S + GKN +M+ + E P L KL
Sbjct: 35 GKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLS 94
Query: 181 PHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN-TGLGPEKTSFF 357
+ G VG +FT +V + AR G +A +V +PA
Sbjct: 95 KRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLPAGPLEDFAHSMEPHL 154
Query: 358 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
++L +PTK+ KG + + +D + + G + +A +L ++
Sbjct: 155 RSLGLPTKLEKGIVTLYSDYTVCEEGKVLTPEQARILKLV 194
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 63.3 bits (147), Expect = 3e-09
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Frame = +1
Query: 28 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 207
+V + + Q+QQIR +LRG + V M +NT++ A+ E ++ L H +G
Sbjct: 31 VVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALN---ELGGSVATLNDHAEGQSAL 87
Query: 208 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKI 384
+FT + + L + K + A+PG AP +VIP T P Q + IP I
Sbjct: 88 IFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQQVGIPAAI 147
Query: 385 SKGTIEIINDVHILKPGDKVGASEATLL 468
G ++I ++K G+ + A L
Sbjct: 148 EGGKVKIRETKTVVKKGEVINKKVAEAL 175
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 61.3 bits (142), Expect = 1e-08
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +1
Query: 28 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 207
I + ++ +Q+IR +R + + + K ++ +A+K+ + A E L +
Sbjct: 25 IANIRGIPTRDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALL 83
Query: 208 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 381
+ T ++ + +E+KV P + G IAP +VIP T + GP +T +AL + TK
Sbjct: 84 LSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTK 142
Query: 382 ISKGTIEIINDVHILKPGDKVGASEATLLNML 477
++ G IEI+ D ++K G+ V A +L L
Sbjct: 143 VTSGKIEIVEDAVVVKEGEIVSPKVANVLQTL 174
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 60.9 bits (141), Expect = 1e-08
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLP 183
+Y + N+ + +QQIR G S + +G N +M AI E+ L KL P
Sbjct: 36 DYSDVYTFQLHNIRTNILQQIREERAGDSRIFLGNNKVMMIAIGRDEESAQRQNLHKLSP 95
Query: 184 HIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQ 360
+ G G +FT +V++ AR G A S+V+ P
Sbjct: 96 FLTGLCGLLFTNLSKKEVKEYFATVGAPVYARTGQTATESLVLKGGPLPQFPHSMFDHLA 155
Query: 361 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 474
L +P K+ +G I ++ D + +PGD + A A LL +
Sbjct: 156 KLGLPIKLDRGVIVLLQDTTVCEPGDTLSAEAAQLLKL 193
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 94 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP 273
S+ M K+++ +A K NP L+P + GNVG +FT+GDL + +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKTG---NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 274 ARPGAIAPLSVVIPAHNTGL 333
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.1 bits (139), Expect = 3e-08
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 49 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRG 222
G + + R +V + K + + + H E NP L+P + GNVG + T+G
Sbjct: 574 GGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKG 633
Query: 223 DLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 333
DL +V ++ + KV APAR G ++ + V++P NTGL
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 60.1 bits (139), Expect = 3e-08
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 157 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 333
NP L+P + GNVG +FT+GDL +V +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 59.7 bits (138), Expect = 3e-08
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Frame = +1
Query: 7 GEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPH 186
G Y + +GS+Q+Q+IR RG +++ + KN+M+ ++ + ++
Sbjct: 24 GSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARSFG-----GSGMNDMVDF 78
Query: 187 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQA 363
I + +FT D + L + K+ AP + GA+AP+ +VI T L P Q
Sbjct: 79 IDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGPVVGELQN 138
Query: 364 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
L IP+ I G + + ++ G+ V A +L L
Sbjct: 139 LGIPSGIDGGKVVVKQRKVAVEEGEIVSPELADMLAKL 176
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 57.2 bits (132), Expect = 2e-07
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 207
IV V + +Q++R +L G + M +NT+ A D L ++L ++ G +
Sbjct: 36 IVDVRGVPADSLQKMRRNLLGKVEMRMVRNTLSTIAF-DSLPEGEKAKELAKYVDGQMLI 94
Query: 208 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKI 384
V+T + + L K + A+ G IAP +VIP T P FQ + IP I
Sbjct: 95 VYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPTSFKPGPLVGEFQQVGIPAGI 154
Query: 385 SKGTIEIINDVHILKPGDKVGASEATLLNML 477
G + I + ++K G+K+ A A L L
Sbjct: 155 EGGKVVIKDTKTVVKQGEKISAKLAEALTRL 185
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 56.8 bits (131), Expect = 2e-07
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 207
+ G + + + Q++R LR S V + N + R+AI L+++ ++ L+ +I+
Sbjct: 34 VAGIRELPADEFQRLRGLLRPISEVRVVNNNIARRAI---LKSDESIRPLVDYIEDQTAL 90
Query: 208 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKI 384
+F+ + ++ L K P + GA+AP+ +V+ + T P Q+ IP I
Sbjct: 91 IFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGETSFSPGPMVGKLQSAGIPAAI 150
Query: 385 SKGTIEIINDVHILKPGDKVGASEATLLNML 477
G + I V + K GD + A +L ++
Sbjct: 151 KGGKVVINQRVVLAKQGDVITPKVAEVLKLM 181
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 55.6 bits (128), Expect = 5e-07
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Frame = +1
Query: 13 YPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KDHLETNPALEKLLPH 186
Y FI N+ + +++ +R + + HS + GKN +M A+ + E L ++ H
Sbjct: 44 YKHIFIFSVANMRNNKLKDVRNAWK-HSRIFFGKNKVMMVALGREPSSEYRENLHQVSKH 102
Query: 187 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQA 363
++G VG +FT +V + K AR G A +V + P +
Sbjct: 103 LRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDTGPLEQFPHSMEPQLRQ 162
Query: 364 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 474
L +PT + KG + +++D + K GD + +A +L +
Sbjct: 163 LGLPTALKKGVVTLLSDYEVCKEGDILTPEQARVLKL 199
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 53.6 bits (123), Expect = 2e-06
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 207
+V + + + ++Q+IR L+ +++ + +NT+ +A+ E+ P + + L +
Sbjct: 34 MVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGESIPEMTRYLDN---QTAL 90
Query: 208 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKI 384
+FT + L + K +P + GAIAP +++ T P Q+ IP I
Sbjct: 91 IFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASI 150
Query: 385 SKGTIEIINDVHILKPGDKVGASEATLLNML 477
G + + + K G+ V AT+L+ L
Sbjct: 151 DAGKVAVKETKVVCKAGEAVPQKLATMLSKL 181
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 52.8 bits (121), Expect = 4e-06
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Frame = +1
Query: 16 PKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKG 195
P IV NV + QMQ+IR RG + + + KNT++ +A+ D L + KL ++
Sbjct: 27 PVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL-DALGGD--YLKLKDYLGD 83
Query: 196 NVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSI 372
+ + + + + + KV +P +P ++P+ VV+ T + P + Q +
Sbjct: 84 QIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPLMAELQMAGL 143
Query: 373 PTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 480
P I KG + + ++K G+ V A L L+
Sbjct: 144 PVAIEKGKVVVKATTTVVKAGEVVRPEVARALERLD 179
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 51.6 bits (118), Expect = 9e-06
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 3/156 (1%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPA--LEKLLP 183
+Y FI N+ S + IR + +S GKN ++ A+ A L K
Sbjct: 36 QYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKASA 95
Query: 184 HIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSFFQ 360
+KG G +FT +V + E + AR G +A +VV+P + +
Sbjct: 96 ILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLR 155
Query: 361 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 468
L +PTK+ KG I + + K G+ + +A +L
Sbjct: 156 KLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKIL 191
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 49.6 bits (113), Expect = 4e-05
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 13 YPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPA--LEKLLPH 186
Y CF+ DN+ + ++ +R L I GK + +A+ E A L+KL +
Sbjct: 37 YQHCFVFSIDNMRNNYLKDVRKELNDCRI-FFGKTKLTARALGTTPEDAQADGLDKLSKY 95
Query: 187 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 318
+ G+VG +FT D +++D + AR G++A ++ IP+
Sbjct: 96 LSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 48.8 bits (111), Expect = 6e-05
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Frame = +1
Query: 10 EYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI-KDHLET-NPALEKLLP 183
EY + ++V N +Q++ +IR ++ + L G N + A+ K H ++ P L L
Sbjct: 30 EYKRVYVVTLHNPRTQKVSEIRKNMPDIKL-LFGINKVTVWALGKTHKDSYRPKLHHLCK 88
Query: 184 HIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQ 360
++KG +FT+ ++R++L + RPGA A +V I + P +
Sbjct: 89 YLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGPLPKFPHTMEPVLR 148
Query: 361 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 474
L +P K+ +G + + D + D + + +L +
Sbjct: 149 QLGMPVKLVRGVVHLERDYLVCNSEDVLSPEQCRILKL 186
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 47.2 bits (107), Expect = 2e-04
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Frame = +1
Query: 1 ARGEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI-KD-HLETNPALEK 174
A E ++ +N+ + +++R + + +G N ++R A+ +D E +
Sbjct: 33 ALSERSSVYVFKYENMRNGTFKEMRAATEATTTFFVGSNKVLRVALGRDAESEASEGAAT 92
Query: 175 LLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI---PAHN-TGLGPE 342
L +KG+ G +FT DV V+ AR GA+A +V + P H +G E
Sbjct: 93 LGARVKGDCGVMFTNLSREDVESVFERFAVKDYARTGALARETVTVEAGPVHGPSGALME 152
Query: 343 KT--SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 474
T + +PTK+++G IE+ + + K G + A LL +
Sbjct: 153 HTLEPTLRKNGMPTKLNRGVIELEANHTLCKEGQHISPQGAILLRL 198
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 44.8 bits (101), Expect = 0.001
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -2
Query: 356 KKEVFSGPR--PVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM* 183
++ +F R PVL G T A P RAGA TL+ + S TS +SP VK PT P
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 182 GSSFSRAGF 156
G+ + GF
Sbjct: 66 GTRLRKTGF 74
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 44.4 bits (100), Expect = 0.001
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Frame = +1
Query: 25 FIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPA--LEKLLPHIKGN 198
+I N+ + +++IR +G S + MGK +M KA+ E A + KL + G
Sbjct: 41 WIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTKVMAKALGHTPEEEHAENVSKLTKLLHGA 99
Query: 199 VGFVFTRGDLVDVRDKLLENKVQAP-ARPGAIAPLSVVIPA----HNTGLGPEKTSFF-- 357
VG +FT +V E+ VQ AR GA+AP + VIPA G P +
Sbjct: 100 VGLLFTNSKPDEVIG-YFESFVQNDFARAGAVAPFTHVIPAGPVYSRAGQIPVEDDILLT 158
Query: 358 -------QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 474
+ L +PT + G + ++ D + G ++ + + LL +
Sbjct: 159 HTLEPQVRQLGMPTVLKNGVVTLLADFPLCTEGQQLDSRQTRLLKL 204
>UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protein;
n=1; Blastopirellula marina DSM 3645|Rep: Protein
disulfide-isomerase-like protein - Blastopirellula
marina DSM 3645
Length = 717
Score = 33.9 bits (74), Expect = 1.9
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 376 WGWKEPGRKKSSQDQGQCYERE*RQTMEQW-LQDEPGLGLCSPT 248
W W+ P ++Q Q +ER + +E W Q +P LG SP+
Sbjct: 422 WSWRLPDSASAAQKQALTHERRRQALLESWTAQPQPSLGGKSPS 465
>UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Rep:
AER172Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1268
Score = 33.9 bits (74), Expect = 1.9
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = -1
Query: 417 DIIDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFIT 238
DI++NFN N D ++L +R L ++ + R++S+ + G+D +++
Sbjct: 268 DIVENFNKIYHNFENDKETLLKRLKLEENDKLLEYDKKRKYSDKANEEAGIDSIIEDSEP 327
Query: 237 HINKISTGEDKANISLDV 184
+ K ++L V
Sbjct: 328 DVKKSRNSISSLPVNLGV 345
>UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7271,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 145
Score = 32.7 bits (71), Expect = 4.4
Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 194 EMLALS-SPVEILLMCVINCWRTKSKPR 274
+ LAL+ +PV++LL CV+ CW T S+PR
Sbjct: 74 QALALALAPVQLLLACVLTCW-TGSRPR 100
>UniRef50_Q5KPR7 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 545
Score = 32.7 bits (71), Expect = 4.4
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +1
Query: 271 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 450
P++PGA+ L ++ + G P +F+ + S+PT +I++ H+L + +
Sbjct: 264 PSQPGALPALPTLLAPNPDGSKPMLVNFYPSGSVPTTPVTFASQILSSNHVLLGRNLAAS 323
Query: 451 SEATLLNM 474
S A ++++
Sbjct: 324 SGARVISI 331
>UniRef50_UPI00005874CE Cluster: PREDICTED: similar to
OTTHUMP00000029908; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to OTTHUMP00000029908
- Strongylocentrotus purpuratus
Length = 379
Score = 32.3 bits (70), Expect = 5.8
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +1
Query: 115 NTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 294
N M+K I+ H+E N ALE ++ +K +V + T + DVR ++ + + +
Sbjct: 307 NITMKKEIEGHIEENEALETIIQQLKEDVKSMST-DPISDVRKQMFPHLYKEVQKCTPDM 365
Query: 295 PLSVVIPAHN 324
+ + IP H+
Sbjct: 366 DVELDIPRHD 375
>UniRef50_A6GTP1 Cluster: Putative transcriptional regulator; n=1;
Limnobacter sp. MED105|Rep: Putative transcriptional
regulator - Limnobacter sp. MED105
Length = 220
Score = 32.3 bits (70), Expect = 5.8
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 325 TGLGP--EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 477
T +GP EK +FF+ I + S TIE +ND K GDK G L N++
Sbjct: 133 TSVGPVGEKVAFFRNSFI--EASAKTIEELNDPTKAKNGDKAGIQSVALANIM 183
>UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1803
Score = 32.3 bits (70), Expect = 5.8
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -1
Query: 342 LRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFES 163
L+ KA + N R S + T+ +F+ + F TH +N S ++F+E
Sbjct: 100 LKDKAKIWL-NSLRPRSIRTWTNLQAEFLKKFFPTHRTN-GLKRQISNFSAKENEKFYEC 157
Query: 162 WICFKMVLDGFPHHG 118
W + ++ FPHHG
Sbjct: 158 WERYMEAINAFPHHG 172
>UniRef50_Q9XJT6 Cluster: Terminase; n=2; root|Rep: Terminase -
Bacteriophage D3
Length = 563
Score = 32.3 bits (70), Expect = 5.8
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -1
Query: 480 VQHVEKSSFRSSHLITRLQDMDI-IDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDD 304
+Q +++++LITRL + I + +FN T+ N+S K +E R + RT GN
Sbjct: 440 LQDAAFDDWQANYLITRLSNTSIPVVDFNQTVKNMSDPMKEVEARVIARTLWH--DGNPV 497
Query: 303 RQWSNGS 283
W G+
Sbjct: 498 MTWMMGN 504
>UniRef50_UPI0000EFD0F5 Cluster: hypothetical protein An18g01440;
n=1; Aspergillus niger|Rep: hypothetical protein
An18g01440 - Aspergillus niger
Length = 693
Score = 31.9 bits (69), Expect = 7.7
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -2
Query: 407 IISIVPFEILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTST 228
+ S++P + WKKE+FS P + G T + + P +W+ + SLS T+T
Sbjct: 338 VFSLIPQHGKYAYKATWKKEIFSSPFEKV--GETVSSTFLDPVVPSSWS-GNRSLSNTTT 394
Query: 227 RSP 219
P
Sbjct: 395 FDP 397
>UniRef50_A6C829 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 373
Score = 31.9 bits (69), Expect = 7.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 136 WLSSSWCFCP*AQCCDHAMKYGSVASVASLHCPHPL*NILGI 11
+ S C C QC M++G ++ V +LH P P+ I GI
Sbjct: 279 YYSMPHCLC---QCMPEMMRFGEMSDVVALHAPRPVLLINGI 317
>UniRef50_A5ARJ7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 792
Score = 31.9 bits (69), Expect = 7.7
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = -1
Query: 342 LRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFES 163
L+ KA + N R S + T+ +F+ + F+TH + +N S ++F+E
Sbjct: 234 LKDKAKIWL-NSLRPRSIRTWTNLQAEFLKKFFLTHRTN-GLKKANSNFSAKENEKFYEC 291
Query: 162 WICFKMVLDGFPHHG 118
W + ++ PHHG
Sbjct: 292 WERYMEAINACPHHG 306
>UniRef50_Q9HF59 Cluster: Cdc24; n=2; Saccharomycetaceae|Rep: Cdc24
- Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 761
Score = 31.9 bits (69), Expect = 7.7
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 8/139 (5%)
Frame = +1
Query: 52 SQQMQQIRISLRGHSIVLMGKNTMMRKAIKD-----HLETNPALE-KLLPHIKGNVGFVF 213
S Q Q ISLR S+V +M K + + H+ + + LP +K +
Sbjct: 2 SNQASQSTISLR--SVVSTATQQLMNKKVSEEDSLYHICVGVKRKLECLPQLKPYLALAH 59
Query: 214 TRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALS--IPTKIS 387
L + +L Q A A PLS + PAHN+ + + +S PT IS
Sbjct: 60 ANAALASEQQAVL--LAQKDAMEAAEVPLSPLNPAHNSMISASAGAATSPVSEIRPTSIS 117
Query: 388 KGTIEIINDVHILKPGDKV 444
T++ D + + D V
Sbjct: 118 SSTLDESEDSNAVNMEDTV 136
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,369,208
Number of Sequences: 1657284
Number of extensions: 10740255
Number of successful extensions: 33947
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 32780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33907
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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