Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G05
         (480 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.42 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   0.97 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   1.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   6.9  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   9.1  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +3

Query: 126 EESHQGPS*NKSSSRKTASSHQGKC---WLCLHPWR 224
           +   QGP  + + +  + S H   C   W+C H WR
Sbjct: 350 QSKDQGPPNDGNGNILSPSIHDNICSNGWICEHRWR 385


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 0.97
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 99  CAHGQKHHDEESHQGPS*NKSSSRKTASS 185
           C  G+  HD++    P  + SSS ++A S
Sbjct: 430 CLDGKLPHDDQPPLSPQSDSSSSSRSAES 458


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 357  EERSLLRTKASVMSGNDDRQW 295
            E R  LRT A++++ N+ R W
Sbjct: 1177 ELRPYLRTAAAILTWNEKRFW 1197


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 351 FLPGSFHPH 377
           FLP S+HPH
Sbjct: 311 FLPPSYHPH 319


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 359 WKKEVFSGPRPVL*AGMTTD 300
           WK     GP+PV   G T D
Sbjct: 29  WKSRGVVGPKPVPFFGTTKD 48


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 397 IEIINDVHILKPGDKVGASEATLLN 471
           I I+N  HIL+   K G S   L+N
Sbjct: 480 IGIVNQFHILQFITKNGTSNNYLIN 504


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/45 (22%), Positives = 23/45 (51%)
 Frame = +1

Query: 49  GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLP 183
           G+QQ  +++++L    +        MRK  ++   T+  L +++P
Sbjct: 356 GTQQSVELKLALDQEQLKSKKLEESMRKLDEEMKRTDELLYQMIP 400


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 246 FITHINKISTGEDKANISLDVRKQFFESWICFKMVLDG 133
           FI  I  I     +A+I  D RK+   SW   K +  G
Sbjct: 9   FILVITLIFLYFGEADIKKDCRKESKVSWAALKKMKAG 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,554
Number of Sequences: 438
Number of extensions: 3058
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)