Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G04
(497 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 31 0.46
Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical pr... 29 1.9
U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2 prot... 29 1.9
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 29 2.5
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 29 2.5
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 29 2.5
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 28 3.3
AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical ... 28 3.3
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 28 3.3
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 28 3.3
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 28 3.3
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 28 4.3
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 27 5.7
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 27 5.7
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 27 5.7
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 27 5.7
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 5.7
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z72502-12|CAI46558.2| 303|Caenorhabditis elegans Hypothetical p... 27 10.0
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z47356-3|CAA87416.1| 268|Caenorhabditis elegans Hypothetical pr... 27 10.0
AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical... 27 10.0
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 31.1 bits (67), Expect = 0.46
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 369 PSQQNKPQTTQSPRTTKPPNYTQGGE-DPVYDEDSLPAPSSQCG 497
P QQ PQT Q T P N QGG P S P+ Q G
Sbjct: 55 PRQQPPPQTWQRTPTMSPANIFQGGSGTPGSQRSSTGTPNHQMG 98
>Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical
protein C56A3.7 protein.
Length = 351
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 339 YTPRVCCGPLPSQQNKPQTTQS-PRTT--KPPN 428
Y P + P+QQ+ P T QS P+TT KPPN
Sbjct: 157 YAPSIPLPEHPAQQSAPPTQQSRPQTTSHKPPN 189
>U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2
protein.
Length = 351
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 339 YTPRVCCGPLPSQQNKPQTTQS-PRTT--KPPN 428
Y P + P+QQ+ P T QS P+TT KPPN
Sbjct: 157 YAPSIPLPEHPAQQSAPPTQQSRPQTTSHKPPN 189
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 369 PSQQNKPQTTQSPRTTKPPNYTQGGEDPVYDEDS 470
PS+ NK +P + PP YT G + V D S
Sbjct: 169 PSEDNKASEAVNPYISIPPTYTFGADPSVADFSS 202
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 369 PSQQNKPQTTQSPRTTKPPNYTQGGEDPVYDEDS 470
PS+ NK +P + PP YT G + V D S
Sbjct: 169 PSEDNKASEAVNPYISIPPTYTFGADPSVADFSS 202
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 369 PSQQNKPQTTQSPRTTKPPNYTQGGEDPVYDEDS 470
PS+ NK +P + PP YT G + V D S
Sbjct: 169 PSEDNKASEAVNPYISIPPTYTFGADPSVADFSS 202
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 369 PSQQNKPQTTQSPRTTKPPNYTQGGEDPVYDEDS 470
PS+ NK +P + PP YT G + V D S
Sbjct: 169 PSEDNKASEXVNPYISIPPTYTFGADPSVADFSS 202
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 402 SPRTTKPPNYTQGGEDPVYDEDSLPAPSSQCG 497
SP T PP+Y+ G P YD P+ + + G
Sbjct: 1081 SPSTVPPPSYSHVGRTPSYDGQPPPSYNHRNG 1112
>AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical
protein W03F11.6b protein.
Length = 678
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 402 SPRTTKPPNYTQGGEDPVYDEDSLPAPSSQCG 497
SP T PP+Y+ G P YD P+ + + G
Sbjct: 99 SPSTVPPPSYSHVGRTPSYDGQPPPSYNHRNG 130
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 402 SPRTTKPPNYTQGGEDPVYDEDSLPAPSSQCG 497
SP T PP+Y+ G P YD P+ + + G
Sbjct: 1079 SPSTVPPPSYSHVGRTPSYDGQPPPSYNHRNG 1110
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 402 SPRTTKPPNYTQGGEDPVYDEDSLPAPSSQCG 497
SP T PP+Y+ G P YD P+ + + G
Sbjct: 1079 SPSTVPPPSYSHVGRTPSYDGQPPPSYNHRNG 1110
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 402 SPRTTKPPNYTQGGEDPVYDEDSLPAPSSQCG 497
SP T PP+Y+ G P YD P+ + + G
Sbjct: 1079 SPSTVPPPSYSHVGRTPSYDGQPPPSYNHRNG 1110
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = +3
Query: 363 PLPSQQNKPQTTQSPRTTKPPNYTQGGED-----PVYDE 464
P P + +P+TT + TT TQG E+ P YDE
Sbjct: 369 PTPRRTRRPKTTTAAPTTTTEEVTQGYEEEAVELPKYDE 407
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 342 TPRVCCGPLPSQQNKPQTTQSPRTTKPPNYTQGGEDPVYDE 464
TP P P+T ++PRT K P + +PV +E
Sbjct: 463 TPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEE 503
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 342 TPRVCCGPLPSQQNKPQTTQSPRTTKPPNYTQGGEDPVYDE 464
TP P P+T ++PRT K P + +PV +E
Sbjct: 413 TPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEE 453
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 342 TPRVCCGPLPSQQNKPQTTQSPRTTKPPNYTQGGEDPVYDE 464
TP P P+T ++PRT K P + +PV +E
Sbjct: 463 TPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEE 503
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 342 TPRVCCGPLPSQQNKPQTTQSPRTTKPPNYTQGGEDPVYDE 464
TP P P+T ++PRT K P + +PV +E
Sbjct: 463 TPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEE 503
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 QCGF-EGYTPRVCCGPLPSQQNKPQTTQSPRTTKPPNYTQGGEDPVYDEDSLPAPSSQC 494
+C F E + VCCGP S +N + P TT+ + T G + P+ C
Sbjct: 1385 KCQFSEVASQNVCCGPKNSPKNATEKPTEPPTTQ-ASTTVGAIIVTKKSKPIKVPAQHC 1442
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +3
Query: 369 PSQQNKPQTTQSPRTTKPPNYTQGGE---DPVYDEDSLPAPSSQCG 497
P QQ PQT Q T P N QG P S P+ Q G
Sbjct: 55 PRQQPPPQTWQRTPTMSPANIFQGDSGSGTPGSQRSSTGTPNHQMG 100
>Z72502-12|CAI46558.2| 303|Caenorhabditis elegans Hypothetical
protein C08B6.13 protein.
Length = 303
Score = 26.6 bits (56), Expect = 10.0
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 105 VVKKVFCDPKWEKD 146
V++ +FCDPKW K+
Sbjct: 284 VLRTIFCDPKWLKN 297
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 363 PLPSQQNKPQTTQSPRTTKPPNYTQGG-EDPVYDEDSLPAPSSQ 491
P P Q +PQ R +PP T G P Y +++ P Q
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQ 221
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 363 PLPSQQNKPQTTQSPRTTKPPNYTQGG-EDPVYDEDSLPAPSSQ 491
P P Q +PQ R +PP T G P Y +++ P Q
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQ 221
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 363 PLPSQQNKPQTTQSPRTTKPPNYTQGG-EDPVYDEDSLPAPSSQ 491
P P Q +PQ R +PP T G P Y +++ P Q
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQ 221
>Z47356-3|CAA87416.1| 268|Caenorhabditis elegans Hypothetical
protein T15H9.3 protein.
Length = 268
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +3
Query: 363 PLPSQ---QNKPQTTQSPRTTKPPNYTQGGEDPVYDEDSLPAPSSQ 491
P+P+Q Q +PQ +Q P +P Q P S P PSS+
Sbjct: 90 PIPTQIQSQLQPQISQIPIHNQPQIQIQSQVQPQLPTQSQPKPSSK 135
>AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical
protein Y69A2AR.9 protein.
Length = 300
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 342 TPRVCCGPLPSQQNKPQTTQSPRTTKPPNYTQGGEDPV 455
+P+ P+ +TTQ+P T PP Q DP+
Sbjct: 153 SPKDVTAEAPTPPKTTKTTQTPGRTLPPEERQEETDPL 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,581,758
Number of Sequences: 27780
Number of extensions: 212168
Number of successful extensions: 750
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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