Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G03
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.54 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   1.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.54
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 204 WYLFTLLQKCG*INY*TAFLLR*ICISFRYCFQIFSLC 91
           +Y   LL  C  I + T  LL  +CI + YC  I  LC
Sbjct: 261 FYYMHLLFCCAFIIF-TMHLLFLLCIYYFYCALIILLC 297


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 11/15 (73%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = +2

Query: 311 QWNQWRKPRRP-EQL 352
           Q NQW KP RP EQL
Sbjct: 582 QQNQWCKPCRPREQL 596


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 11/15 (73%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = +2

Query: 311 QWNQWRKPRRP-EQL 352
           Q NQW KP RP EQL
Sbjct: 474 QQNQWCKPCRPREQL 488


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 109 PNFQPLQSMPLKPLEYILVFLHSSSKSSIPQHQDLV 2
           P   P+ S+P  P    +  +   ++ SI QH  L+
Sbjct: 477 PQLSPMSSLPPYPNRTQITEVTQQTEPSIYQHDQLL 512


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -1

Query: 126 SFRYCFQIFSLCNRCH*SR*NIFWC 52
           S  + F    LC+ C+ +   + WC
Sbjct: 305 SVPFIFDSIHLCDVCYSTIGTVSWC 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.308    0.125    0.325 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,057
Number of Sequences: 336
Number of extensions: 1685
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.3 bits)