Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G03
(357 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85784-1|CAA59769.1| 297|Homo sapiens syntaxin-4 protein. 28 7.4
CR541806-1|CAG46605.1| 297|Homo sapiens STX4A protein. 28 7.4
BT007326-1|AAP35990.1| 297|Homo sapiens syntaxin 4A (placental)... 28 7.4
BC106038-1|AAI06039.1| 622|Homo sapiens SRY (sex determining re... 28 7.4
BC002436-1|AAH02436.1| 297|Homo sapiens syntaxin 4 protein. 28 7.4
AL592146-3|CAI16596.1| 604|Homo sapiens SRY (sex determining re... 28 7.4
AJ000541-1|CAA04174.1| 297|Homo sapiens syntaxin 4 precursor pr... 28 7.4
AF318489-1|AAG40313.1| 297|Homo sapiens syntaxin 4 protein. 28 7.4
AF116571-1|AAF23875.1| 604|Homo sapiens SRY-like DNA binding pr... 28 7.4
AF098915-1|AAD16237.1| 622|Homo sapiens type 1 diabetes autoant... 28 7.4
AF083105-1|AAC83687.1| 890|Homo sapiens HMG box factor SOX-13 p... 28 7.4
AF026007-1|AAB88810.1| 297|Homo sapiens syntaxin 4 protein. 28 7.4
U16126-1|AAC50420.1| 908|Homo sapiens EAA4 protein. 28 9.8
AL355532-1|CAC25104.1| 213|Homo sapiens bA487F5.1 (glutamate re... 28 9.8
AJ301610-1|CAC67487.1| 869|Homo sapiens GluR6 kainate receptor ... 28 9.8
AJ252246-1|CAC81020.1| 892|Homo sapiens kainate receptor subuni... 28 9.8
>X85784-1|CAA59769.1| 297|Homo sapiens syntaxin-4 protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/74 (20%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 19 EELKTLMKSGETPEYILTALVASIAEAENLEAVTKRNADLSQQKGS--SVINLPTFLKQS 192
EEL+ ++ SG++ ++ L + + L ++ R++++ Q + S + ++ TFL
Sbjct: 171 EELEQMLDSGQSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIRELHDIFTFLATE 230
Query: 193 EKVPAEVLDQLISN 234
++ E+++++ N
Sbjct: 231 VEMQGEMINRIEKN 244
>CR541806-1|CAG46605.1| 297|Homo sapiens STX4A protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/74 (20%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 19 EELKTLMKSGETPEYILTALVASIAEAENLEAVTKRNADLSQQKGS--SVINLPTFLKQS 192
EEL+ ++ SG++ ++ L + + L ++ R++++ Q + S + ++ TFL
Sbjct: 171 EELEQMLDSGQSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIRELHDIFTFLATE 230
Query: 193 EKVPAEVLDQLISN 234
++ E+++++ N
Sbjct: 231 VEMQGEMINRIEKN 244
>BT007326-1|AAP35990.1| 297|Homo sapiens syntaxin 4A (placental)
protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/74 (20%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 19 EELKTLMKSGETPEYILTALVASIAEAENLEAVTKRNADLSQQKGS--SVINLPTFLKQS 192
EEL+ ++ SG++ ++ L + + L ++ R++++ Q + S + ++ TFL
Sbjct: 171 EELEQMLDSGQSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIRELHDIFTFLATE 230
Query: 193 EKVPAEVLDQLISN 234
++ E+++++ N
Sbjct: 231 VEMQGEMINRIEKN 244
>BC106038-1|AAI06039.1| 622|Homo sapiens SRY (sex determining
region Y)-box 13 protein.
Length = 622
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 97 PLQSMPLKPLEYILVFLHS 41
P+Q +P KP+EY L LHS
Sbjct: 250 PIQPIPCKPVEYPLQLLHS 268
>BC002436-1|AAH02436.1| 297|Homo sapiens syntaxin 4 protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/74 (20%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 19 EELKTLMKSGETPEYILTALVASIAEAENLEAVTKRNADLSQQKGS--SVINLPTFLKQS 192
EEL+ ++ SG++ ++ L + + L ++ R++++ Q + S + ++ TFL
Sbjct: 171 EELEQMLDSGQSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIRELHDIFTFLATE 230
Query: 193 EKVPAEVLDQLISN 234
++ E+++++ N
Sbjct: 231 VEMQGEMINRIEKN 244
>AL592146-3|CAI16596.1| 604|Homo sapiens SRY (sex determining
region Y)-box 13 protein.
Length = 604
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 97 PLQSMPLKPLEYILVFLHS 41
P+Q +P KP+EY L LHS
Sbjct: 232 PIQPIPCKPVEYPLQLLHS 250
>AJ000541-1|CAA04174.1| 297|Homo sapiens syntaxin 4 precursor
protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/74 (20%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 19 EELKTLMKSGETPEYILTALVASIAEAENLEAVTKRNADLSQQKGS--SVINLPTFLKQS 192
EEL+ ++ SG++ ++ L + + L ++ R++++ Q + S + ++ TFL
Sbjct: 171 EELEQMLDSGQSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIRELHDIFTFLATE 230
Query: 193 EKVPAEVLDQLISN 234
++ E+++++ N
Sbjct: 231 VEMQGEMINRIEKN 244
>AF318489-1|AAG40313.1| 297|Homo sapiens syntaxin 4 protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/74 (20%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 19 EELKTLMKSGETPEYILTALVASIAEAENLEAVTKRNADLSQQKGS--SVINLPTFLKQS 192
EEL+ ++ SG++ ++ L + + L ++ R++++ Q + S + ++ TFL
Sbjct: 171 EELEQMLDSGQSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIRELHDIFTFLATE 230
Query: 193 EKVPAEVLDQLISN 234
++ E+++++ N
Sbjct: 231 VEMQGEMINRIEKN 244
>AF116571-1|AAF23875.1| 604|Homo sapiens SRY-like DNA binding
protein protein.
Length = 604
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 97 PLQSMPLKPLEYILVFLHS 41
P+Q +P KP+EY L LHS
Sbjct: 232 PIQPIPCKPVEYPLQLLHS 250
>AF098915-1|AAD16237.1| 622|Homo sapiens type 1 diabetes
autoantigen ICA12 protein.
Length = 622
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 97 PLQSMPLKPLEYILVFLHS 41
P+Q +P KP+EY L LHS
Sbjct: 250 PIQPIPCKPVEYPLQLLHS 268
>AF083105-1|AAC83687.1| 890|Homo sapiens HMG box factor SOX-13
protein.
Length = 890
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 97 PLQSMPLKPLEYILVFLHS 41
P+Q +P KP+EY L LHS
Sbjct: 232 PIQPIPCKPVEYPLQLLHS 250
>AF026007-1|AAB88810.1| 297|Homo sapiens syntaxin 4 protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/74 (20%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 19 EELKTLMKSGETPEYILTALVASIAEAENLEAVTKRNADLSQQKGS--SVINLPTFLKQS 192
EEL+ ++ SG++ ++ L + + L ++ R++++ Q + S + ++ TFL
Sbjct: 171 EELEQMLDSGQSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIRELHDIFTFLATE 230
Query: 193 EKVPAEVLDQLISN 234
++ E+++++ N
Sbjct: 231 VEMQGEMINRIEKN 244
>U16126-1|AAC50420.1| 908|Homo sapiens EAA4 protein.
Length = 908
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 34 LMKSGETP-EYILTALVASIAEAENLEAVTKRNADLSQQKG 153
L+KS E + +LT+ A + E+ +E VT+RN +L+Q G
Sbjct: 717 LVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGG 757
>AL355532-1|CAC25104.1| 213|Homo sapiens bA487F5.1 (glutamate
receptor, ionotropic, kainate 2) protein.
Length = 213
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 34 LMKSGETP-EYILTALVASIAEAENLEAVTKRNADLSQQKG 153
L+KS E + +LT+ A + E+ +E VT+RN +L+Q G
Sbjct: 22 LVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGG 62
>AJ301610-1|CAC67487.1| 869|Homo sapiens GluR6 kainate receptor
protein.
Length = 869
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 34 LMKSGETP-EYILTALVASIAEAENLEAVTKRNADLSQQKG 153
L+KS E + +LT+ A + E+ +E VT+RN +L+Q G
Sbjct: 717 LVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGG 757
>AJ252246-1|CAC81020.1| 892|Homo sapiens kainate receptor subunit
protein.
Length = 892
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 34 LMKSGETP-EYILTALVASIAEAENLEAVTKRNADLSQQKG 153
L+KS E + +LT+ A + E+ +E VT+RN +L+Q G
Sbjct: 717 LVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGG 757
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.308 0.125 0.325
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,424,798
Number of Sequences: 237096
Number of extensions: 1001845
Number of successful extensions: 1435
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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