Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G03
(357 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46381-3|CAA86516.1| 354|Caenorhabditis elegans Hypothetical pr... 30 0.41
Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical p... 30 0.41
Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical pr... 30 0.41
Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical pr... 30 0.41
AC024810-5|AAF60763.1| 507|Caenorhabditis elegans Hypothetical ... 29 0.72
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 27 2.9
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 27 2.9
AF036693-11|AAK29788.1| 392|Caenorhabditis elegans Hypothetical... 27 2.9
Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical pr... 27 5.1
U58756-4|AAC48082.1| 291|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein. 27 5.1
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 27 5.1
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 26 6.7
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 26 6.7
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z72502-12|CAI46558.2| 303|Caenorhabditis elegans Hypothetical p... 26 8.9
Z68303-6|CAD89754.1| 708|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z68303-5|CAA92639.2| 706|Caenorhabditis elegans Hypothetical pr... 26 8.9
AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical ... 26 8.9
>Z46381-3|CAA86516.1| 354|Caenorhabditis elegans Hypothetical
protein M01F1.3 protein.
Length = 354
Score = 30.3 bits (65), Expect = 0.41
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 88 IAEAENLEAVTKRNADLSQQKGSSVINLPTFLKQSEKVPAE 210
I+ A EAV K L +KG + LP +LK+ + +P+E
Sbjct: 31 ISSASVAEAVEKYEGKLKLEKGDRRLRLPPWLKKEKILPSE 71
>Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical
protein F49E2.2c protein.
Length = 576
Score = 30.3 bits (65), Expect = 0.41
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 73 ALVASIAEAENLEA-VTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLD-QLISNKRLY 246
A+VA+ EN+E V + D SSV L S ++ +V L+SN R
Sbjct: 284 AVVAAEEIKENVEKKVDEAVQDSRSNSTSSVATTLEDLPSSRRLTNDVSGVTLVSNYRRQ 343
Query: 247 NIILQNYPSMLALRSNSEQKLPVEPVAETPKTRAVK 354
+I +Q P + + LP +PV E P+ ++
Sbjct: 344 SIEIQQLPPNNSYSHIAPPVLPPKPVVENPQYAPIR 379
>Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical
protein F49E2.2b protein.
Length = 517
Score = 30.3 bits (65), Expect = 0.41
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 73 ALVASIAEAENLEA-VTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLD-QLISNKRLY 246
A+VA+ EN+E V + D SSV L S ++ +V L+SN R
Sbjct: 230 AVVAAEEIKENVEKKVDEAVQDSRSNSTSSVATTLEDLPSSRRLTNDVSGVTLVSNYRRQ 289
Query: 247 NIILQNYPSMLALRSNSEQKLPVEPVAETPKTRAVK 354
+I +Q P + + LP +PV E P+ ++
Sbjct: 290 SIEIQQLPPNNSYSHIAPPVLPPKPVVENPQYAPIR 325
>Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical
protein F49E2.2a protein.
Length = 522
Score = 30.3 bits (65), Expect = 0.41
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 73 ALVASIAEAENLEA-VTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLD-QLISNKRLY 246
A+VA+ EN+E V + D SSV L S ++ +V L+SN R
Sbjct: 230 AVVAAEEIKENVEKKVDEAVQDSRSNSTSSVATTLEDLPSSRRLTNDVSGVTLVSNYRRQ 289
Query: 247 NIILQNYPSMLALRSNSEQKLPVEPVAETPKTRAVK 354
+I +Q P + + LP +PV E P+ ++
Sbjct: 290 SIEIQQLPPNNSYSHIAPPVLPPKPVVENPQYAPIR 325
>AC024810-5|AAF60763.1| 507|Caenorhabditis elegans Hypothetical
protein Y54E10A.6 protein.
Length = 507
Score = 29.5 bits (63), Expect = 0.72
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 67 LTALVASIAEAENLEAVTKRNADLSQQKGSSVINLPTF------LKQSEKVPAEVLDQLI 228
L AL ASI++ ENLE++ N L++ + NL K+PA + +
Sbjct: 103 LDALPASISKCENLESLILNNNRLNESSFPDISNLSNLHIFDAAHNTISKIPASLTSHNL 162
Query: 229 SNKRLYNIILQN 264
S K L+ IIL +
Sbjct: 163 SAK-LHTIILSH 173
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 115 VTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLDQLISNKRLYNIILQNYPSMLALRSN 294
V RN D + +S LPT L S P V+ N +YN +++
Sbjct: 104 VNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNAGNIVVYNHRTSRRIAVMGKHQR 163
Query: 295 SEQKLPVEP 321
S ++ V P
Sbjct: 164 SVTQITVTP 172
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 115 VTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLDQLISNKRLYNIILQNYPSMLALRSN 294
V RN D + +S LPT L S P V+ N +YN +++
Sbjct: 104 VNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNAGNIVVYNHRTSRRIAVMGKHQR 163
Query: 295 SEQKLPVEP 321
S ++ V P
Sbjct: 164 SVTQITVTP 172
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 115 VTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLDQLISNKRLYNIILQNYPSMLALRSN 294
V RN D + +S LPT L S P V+ N +YN +++
Sbjct: 104 VNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNAGNIVVYNHRTSRRIAVMGKHQR 163
Query: 295 SEQKLPVEP 321
S ++ V P
Sbjct: 164 SVTQITVTP 172
>AF036693-11|AAK29788.1| 392|Caenorhabditis elegans Hypothetical
protein C49A9.1 protein.
Length = 392
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +1
Query: 25 LKTLMKSGETPEYILTALVASIAEAENLEAVTKRNADLSQQKGSSVINLPTFLKQSEKVP 204
+++L ++ + EY +T ++ + ++ + + S + SSV P+FL P
Sbjct: 136 IRSLNQNLDLDEYNITVHATGVSASGHVIELRAKAQPASNYRNSSVYENPSFLDDLSDEP 195
Query: 205 AEVLDQLISNKRL 243
E+ + ISN L
Sbjct: 196 LEI-KKTISNNSL 207
>Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical
protein T01E8.2 protein.
Length = 367
Score = 26.6 bits (56), Expect = 5.1
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 109 EAVTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLDQLISNKRLYNII--LQNYPSMLA 282
E R D ++G + L F+ +++ + + ++++ L II +QN
Sbjct: 165 EVKKNREQDRRDRQGEAFDALKNFIIENKLMTSHQVEKMQRLNTLDIIIAYIQNKKHNFV 224
Query: 283 LRSNSEQKLPVEPVAETPKT 342
RS+ EQ L +AE KT
Sbjct: 225 SRSDQEQSLYAHAIAEGKKT 244
>U58756-4|AAC48082.1| 291|Caenorhabditis elegans Hypothetical
protein F58F9.6 protein.
Length = 291
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 9 SWC*GIEDFDEE-WRNTRIYSNGFSGIDCRG*KFGSSNEKKCR 134
SW I ++ W TR +G +G C G +SN+ CR
Sbjct: 129 SWSGYIRNYASNGWERTRSCLSGTAGCQCTGSTVETSNKCPCR 171
>AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein.
Length = 367
Score = 26.6 bits (56), Expect = 5.1
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 109 EAVTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLDQLISNKRLYNII--LQNYPSMLA 282
E R D ++G + L F+ +++ + + ++++ L II +QN
Sbjct: 165 EVKKNREQDRRDRQGEAFDALKNFIIENKLMTSHQVEKMQRLNTLDIIIAYIQNKKHNFV 224
Query: 283 LRSNSEQKLPVEPVAETPKT 342
RS+ EQ L +AE KT
Sbjct: 225 SRSDQEQSLYAHAIAEGKKT 244
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 26.6 bits (56), Expect = 5.1
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +1
Query: 97 AENLEAVTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLDQLISNKRLYNIILQNYPSM 276
A+N E L ++ + +P E+ AE L+ L+ N I+ +
Sbjct: 279 AQNPEIDLPEVPSLDLEETTENPEIPEISTPREEDSAENLENLVENSEKSEILEDLEENS 338
Query: 277 LALRSNSEQKLPVEPVAETPKTRA 348
L NSE+ +E +AE P A
Sbjct: 339 KNLTENSEKPGILEDLAENPDLEA 362
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +1
Query: 172 PTFLKQSEKV-----PAEVLDQLISNKRLYNIILQNYPSMLALRSNSEQKLPVEPVAETP 336
PT+ K + V P++ LD +IS Y+ +NYP + +R + EP A+TP
Sbjct: 285 PTYTKNEQPVTPRSIPSDELDDVIS---AYH---RNYPMISEIRYPDLNTMRPEPTAQTP 338
Query: 337 KTRA 348
A
Sbjct: 339 PAPA 342
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 26.2 bits (55), Expect = 6.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 76 LVASIAEAENLEAVTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLDQLISNKRLYNII 255
++ S+ EAE V N D ++ + ++ LP F K S ++ +I NKR++
Sbjct: 61 VLPSVKEAER--QVIAANLD---KEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFT-- 113
Query: 256 LQNYPSMLALRSNSE 300
Q+ ALR SE
Sbjct: 114 TQSISGTGALRIGSE 128
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 26.2 bits (55), Expect = 6.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 76 LVASIAEAENLEAVTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLDQLISNKRLYNII 255
++ S+ EAE V N D ++ + ++ LP F K S ++ +I NKR++
Sbjct: 61 VLPSVKEAER--QVIAANLD---KEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFT-- 113
Query: 256 LQNYPSMLALRSNSE 300
Q+ ALR SE
Sbjct: 114 TQSISGTGALRIGSE 128
>Z72502-12|CAI46558.2| 303|Caenorhabditis elegans Hypothetical
protein C08B6.13 protein.
Length = 303
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 142 EINLHFFSLLLPNFQPLQSMPLKPLEYILVFLHSSSK 32
E +LHF + F LQ + + YI+ FL ++++
Sbjct: 66 ESSLHFLESVCVLFMTLQMWTVNTIRYIMTFLMAANR 102
>Z68303-6|CAD89754.1| 708|Caenorhabditis elegans Hypothetical
protein ZK809.5b protein.
Length = 708
Score = 25.8 bits (54), Expect = 8.9
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +1
Query: 49 ETPEYILTALVASIAEAENLEAVTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLDQ 222
+T + + A+ +IAE EA KR A LSQQ+ + L LK SE + +VL Q
Sbjct: 331 KTSQKVKIAVEETIAEYSAKEAKWKRIAGLSQQR---IAVLSEKLKDSE-IERDVLRQ 384
>Z68303-5|CAA92639.2| 706|Caenorhabditis elegans Hypothetical
protein ZK809.5a protein.
Length = 706
Score = 25.8 bits (54), Expect = 8.9
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +1
Query: 49 ETPEYILTALVASIAEAENLEAVTKRNADLSQQKGSSVINLPTFLKQSEKVPAEVLDQ 222
+T + + A+ +IAE EA KR A LSQQ+ + L LK SE + +VL Q
Sbjct: 329 KTSQKVKIAVEETIAEYSAKEAKWKRIAGLSQQR---IAVLSEKLKDSE-IERDVLRQ 382
>AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical
protein F18A12.4 protein.
Length = 674
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 172 PTFLKQSEKVPAEVLDQLISNKRLYNIILQNY 267
P F K +E + + + SNK L N ++ NY
Sbjct: 296 PLFFKSNETESLDTIIESTSNKTLANFLIFNY 327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.125 0.325
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,178,267
Number of Sequences: 27780
Number of extensions: 152866
Number of successful extensions: 385
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -