Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_G03
(357 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 0.62
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 24 0.62
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 1.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 1.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 1.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 1.1
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 1.1
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 1.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 1.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.4
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 4.4
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 20 7.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 20 7.6
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 20 7.6
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.8 bits (49), Expect = 0.62
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 235 KRLYNIILQNYPSMLALRSNSEQKLPVE 318
KRLY+ +L NY ++ N+ +L V+
Sbjct: 22 KRLYDDLLSNYNRLIRPVGNNSDRLTVK 49
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 0.62
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 19 EELKTLM-KSGETPEYILTALVASIAEAENLEAVTKRNADLSQQKGS 156
EE+K ++ K+ E E+ T L +I ++EN K+ A S GS
Sbjct: 174 EEIKNILNKTNEITEH-RTVLAVNIEKSENETKTCKKYAISSNSLGS 219
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 220 DLRPQLVPFHFASKMWVN*LLNCL 149
D + L+P HFA +++ N +N L
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYL 177
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 220 DLRPQLVPFHFASKMWVN*LLNCL 149
D + L+P HFA +++ N +N L
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYL 177
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 220 DLRPQLVPFHFASKMWVN*LLNCL 149
D + L+P HFA +++ N +N L
Sbjct: 205 DFKDPLIPVHFALRIYRNGTVNYL 228
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 220 DLRPQLVPFHFASKMWVN*LLNCL 149
D + L+P HFA +++ N +N L
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYL 177
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 1.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 235 KRLYNIILQNYPSMLALRSNSEQKLPVE 318
KRLY+ +L NY ++ N+ + L V+
Sbjct: 35 KRLYDDLLSNYNRLIRPVMNNTETLTVQ 62
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.6 bits (46), Expect = 1.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 235 KRLYNIILQNYPSMLALRSNSEQKLPVE 318
KRLY+ +L NY ++ SN+ + V+
Sbjct: 22 KRLYDDLLSNYNRLIRPVSNNNDTVVVK 49
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.6 bits (46), Expect = 1.4
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 4 RGPGVEELKTLMKSGETPEYILTALVASIAEAENLE 111
RG GV+ +KT+ K +Y+ + AE E
Sbjct: 506 RGWGVKTMKTIKKGSFVTQYVGEVITNEEAEKRGKE 541
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 4.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 151 LSAEINLHFFSLLLPNFQPLQSMPLKPLEYILVF 50
+S I+LH F LL+ P S+ + L L+F
Sbjct: 280 ISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 313
Score = 20.6 bits (41), Expect = 5.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 235 KRLYNIILQNYPSMLALRSNSEQKLPV 315
KRLY+ +L NY ++ N+ L V
Sbjct: 30 KRLYDDLLSNYNKLVRPVVNTSDVLRV 56
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 4.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 151 LSAEINLHFFSLLLPNFQPLQSMPLKPLEYILVF 50
+S I+LH F LL+ P S+ + L L+F
Sbjct: 280 ISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 313
Score = 20.6 bits (41), Expect = 5.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 235 KRLYNIILQNYPSMLALRSNSEQKLPV 315
KRLY+ +L NY ++ N+ L V
Sbjct: 30 KRLYDDLLSNYNKLVRPVVNTSDVLRV 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.4
Identities = 5/18 (27%), Positives = 11/18 (61%)
Frame = +2
Query: 266 TLQCWL*EVTLNRNCQWN 319
T CW+ ++ + + +WN
Sbjct: 53 TTNCWVTQIWTDHHLKWN 70
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.2 bits (40), Expect = 7.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 33 FDEEWRNTRIYSNGFSG 83
F E+W + R+ N F G
Sbjct: 86 FREQWLDERLRFNDFGG 102
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.2 bits (40), Expect = 7.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 33 FDEEWRNTRIYSNGFSG 83
F E+W + R+ N F G
Sbjct: 86 FREQWLDERLRFNDFGG 102
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 20.2 bits (40), Expect = 7.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 235 KRLYNIILQNYPSMLALRSNSEQKLPVE 318
KRLY+ +L NY ++ N L V+
Sbjct: 26 KRLYDDLLSNYNKLVRPVVNVTDALTVK 53
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.308 0.125 0.325
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,780
Number of Sequences: 438
Number of extensions: 1806
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8308335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.3 bits)
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