Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_G01
         (451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   1.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   9.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   9.4  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +1

Query: 235 VLGALFTNKSVIGYLLLKGADGI---NISYANY*EFARKQCKVNQ*NERIHKFVTPAGKS 405
           V GAL T  S + YL+L+  D I   +    NY +    + K  +  E++ K +T   K+
Sbjct: 9   VFGALLTYVSSVEYLILREIDTILKNDQMTRNYLDCVLDKGKCTKEAEKLKKGITETMKN 68


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 385 QTCEYAHFTDLPYTAFLQI 329
           Q C   H  D+P  A ++I
Sbjct: 564 QNCMCTHKVDIPLNAIVEI 582


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 289  GADGINISYANY*EFARKQCKVNQ*NERIHK 381
            G D + +  A Y     K  +VN+  + IHK
Sbjct: 1369 GIDTVAVCDACYSTIEEKNLQVNESGKLIHK 1399


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,383
Number of Sequences: 336
Number of extensions: 1808
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)