Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F24
(450 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC088355-1|AAH88355.1| 682|Homo sapiens TARS protein protein. 218 8e-57
BC010578-1|AAH10578.2| 723|Homo sapiens threonyl-tRNA synthetas... 218 8e-57
BC000517-1|AAH00517.2| 723|Homo sapiens threonyl-tRNA synthetas... 218 8e-57
AK222804-1|BAD96524.1| 723|Homo sapiens threonyl-tRNA synthetas... 218 8e-57
M63180-1|AAB04939.1| 712|Homo sapiens threonyl-tRNA synthetase ... 216 3e-56
BC132671-1|AAI32672.1| 802|Homo sapiens threonyl-tRNA synthetas... 183 3e-46
BC009997-1|AAH09997.1| 718|Homo sapiens threonyl-tRNA synthetas... 126 3e-29
BC007824-1|AAH07824.2| 709|Homo sapiens TARS2 protein protein. 126 3e-29
BC000541-1|AAH00541.1| 718|Homo sapiens threonyl-tRNA synthetas... 126 3e-29
AL356356-3|CAI15489.1| 588|Homo sapiens threonyl-tRNA synthetas... 126 3e-29
AL356356-2|CAI15488.1| 718|Homo sapiens threonyl-tRNA synthetas... 126 3e-29
AK222814-1|BAD96534.1| 718|Homo sapiens threonyl-tRNA synthetas... 126 3e-29
AK022590-1|BAB14117.1| 588|Homo sapiens protein ( Homo sapiens ... 126 3e-29
AK056653-1|BAB71241.1| 707|Homo sapiens protein ( Homo sapiens ... 103 2e-22
AL356356-1|CAI15487.1| 178|Homo sapiens threonyl-tRNA synthetas... 79 5e-15
BC107719-1|AAI07720.1| 338|Homo sapiens mitochondrial ribosomal... 50 3e-06
BC004896-1|AAH04896.2| 333|Homo sapiens MRPL39 protein protein. 50 3e-06
AF239727-1|AAF44696.1| 296|Homo sapiens unknown protein. 50 3e-06
AF109357-1|AAQ13505.1| 333|Homo sapiens MSTP003 protein. 50 3e-06
AK000458-1|BAA91177.1| 258|Homo sapiens protein ( Homo sapiens ... 49 6e-06
BC057231-1|AAH57231.1| 439|Homo sapiens STIM2 protein protein. 29 5.5
BC015659-1|AAH15659.2| 555|Homo sapiens STIM2 protein protein. 29 5.5
AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein pr... 29 5.5
AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction mol... 29 5.5
AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein. 29 5.5
BC151219-1|AAI51220.1| 581|Homo sapiens matrilin 4 protein. 29 7.3
BC131763-1|AAI31764.1| 581|Homo sapiens matrilin 4 protein. 29 7.3
AL021578-3|CAB46380.1| 622|Homo sapiens matrilin 4 protein. 29 7.3
AL021578-2|CAB39280.1| 581|Homo sapiens matrilin 4 protein. 29 7.3
AL021578-1|CAI21077.1| 432|Homo sapiens matrilin 4 protein. 29 7.3
AJ007581-1|CAA07569.1| 581|Homo sapiens matrilin-4 protein. 29 7.3
BC054502-1|AAH54502.1| 947|Homo sapiens GREB1 protein protein. 29 9.7
AC011994-1|AAX88907.1| 1949|Homo sapiens unknown protein. 29 9.7
AB011147-1|BAA25501.2| 952|Homo sapiens KIAA0575 protein protein. 29 9.7
>BC088355-1|AAH88355.1| 682|Homo sapiens TARS protein protein.
Length = 682
Score = 218 bits (532), Expect = 8e-57
Identities = 95/149 (63%), Positives = 122/149 (81%), Gaps = 3/149 (2%)
Frame = +1
Query: 7 GSGSVSELNPWPEFINKRLALWDKYKKDYEEKLAAQPEVS---IVVTLPDGKTVEAKAWR 177
G G +ELNPWPE+I RL +++ K +++ LA + E I VTLPDGK V+A++W+
Sbjct: 40 GDGGRAELNPWPEYIYTRLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWK 99
Query: 178 TTPYDVAKGISQGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAH 357
TTPY +A GISQGLAD+T+IA+VNN +WDLDRPLE DC LELL++++ +AQ+V+WHSSAH
Sbjct: 100 TTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAH 159
Query: 358 MLGEAMERVYGGCLCYGPPIEEGFYYDMY 444
++GEAMERVYGGCLCYGPPIE GFYYDMY
Sbjct: 160 IMGEAMERVYGGCLCYGPPIENGFYYDMY 188
>BC010578-1|AAH10578.2| 723|Homo sapiens threonyl-tRNA synthetase
protein.
Length = 723
Score = 218 bits (532), Expect = 8e-57
Identities = 95/149 (63%), Positives = 122/149 (81%), Gaps = 3/149 (2%)
Frame = +1
Query: 7 GSGSVSELNPWPEFINKRLALWDKYKKDYEEKLAAQPEVS---IVVTLPDGKTVEAKAWR 177
G G +ELNPWPE+I RL +++ K +++ LA + E I VTLPDGK V+A++W+
Sbjct: 40 GDGGRAELNPWPEYIYTRLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWK 99
Query: 178 TTPYDVAKGISQGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAH 357
TTPY +A GISQGLAD+T+IA+VNN +WDLDRPLE DC LELL++++ +AQ+V+WHSSAH
Sbjct: 100 TTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAH 159
Query: 358 MLGEAMERVYGGCLCYGPPIEEGFYYDMY 444
++GEAMERVYGGCLCYGPPIE GFYYDMY
Sbjct: 160 IMGEAMERVYGGCLCYGPPIENGFYYDMY 188
>BC000517-1|AAH00517.2| 723|Homo sapiens threonyl-tRNA synthetase
protein.
Length = 723
Score = 218 bits (532), Expect = 8e-57
Identities = 95/149 (63%), Positives = 122/149 (81%), Gaps = 3/149 (2%)
Frame = +1
Query: 7 GSGSVSELNPWPEFINKRLALWDKYKKDYEEKLAAQPEVS---IVVTLPDGKTVEAKAWR 177
G G +ELNPWPE+I RL +++ K +++ LA + E I VTLPDGK V+A++W+
Sbjct: 40 GDGGRAELNPWPEYIYTRLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWK 99
Query: 178 TTPYDVAKGISQGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAH 357
TTPY +A GISQGLAD+T+IA+VNN +WDLDRPLE DC LELL++++ +AQ+V+WHSSAH
Sbjct: 100 TTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAH 159
Query: 358 MLGEAMERVYGGCLCYGPPIEEGFYYDMY 444
++GEAMERVYGGCLCYGPPIE GFYYDMY
Sbjct: 160 IMGEAMERVYGGCLCYGPPIENGFYYDMY 188
>AK222804-1|BAD96524.1| 723|Homo sapiens threonyl-tRNA synthetase
variant protein.
Length = 723
Score = 218 bits (532), Expect = 8e-57
Identities = 95/149 (63%), Positives = 122/149 (81%), Gaps = 3/149 (2%)
Frame = +1
Query: 7 GSGSVSELNPWPEFINKRLALWDKYKKDYEEKLAAQPEVS---IVVTLPDGKTVEAKAWR 177
G G +ELNPWPE+I RL +++ K +++ LA + E I VTLPDGK V+A++W+
Sbjct: 40 GDGGRAELNPWPEYIYTRLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWK 99
Query: 178 TTPYDVAKGISQGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAH 357
TTPY +A GISQGLAD+T+IA+VNN +WDLDRPLE DC LELL++++ +AQ+V+WHSSAH
Sbjct: 100 TTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAH 159
Query: 358 MLGEAMERVYGGCLCYGPPIEEGFYYDMY 444
++GEAMERVYGGCLCYGPPIE GFYYDMY
Sbjct: 160 IMGEAMERVYGGCLCYGPPIENGFYYDMY 188
>M63180-1|AAB04939.1| 712|Homo sapiens threonyl-tRNA synthetase
protein.
Length = 712
Score = 216 bits (528), Expect = 3e-56
Identities = 94/149 (63%), Positives = 121/149 (81%), Gaps = 3/149 (2%)
Frame = +1
Query: 7 GSGSVSELNPWPEFINKRLALWDKYKKDYEEKLAAQPEVS---IVVTLPDGKTVEAKAWR 177
G G +ELNPWPE+I RL +++ K +++ LA + E I VTLPDGK V+A++W+
Sbjct: 28 GDGGRAELNPWPEYIYTRLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWK 87
Query: 178 TTPYDVAKGISQGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAH 357
TTPY +A GISQGLAD+T+IA+VNN +WDLDRPLE DC LELL++++ +AQ+V+WHSSAH
Sbjct: 88 TTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAH 147
Query: 358 MLGEAMERVYGGCLCYGPPIEEGFYYDMY 444
++GE MERVYGGCLCYGPPIE GFYYDMY
Sbjct: 148 IMGEGMERVYGGCLCYGPPIENGFYYDMY 176
>BC132671-1|AAI32672.1| 802|Homo sapiens threonyl-tRNA
synthetase-like 2 protein.
Length = 802
Score = 183 bits (445), Expect = 3e-46
Identities = 87/146 (59%), Positives = 111/146 (76%), Gaps = 5/146 (3%)
Frame = +1
Query: 22 SELNPWPEFINKRLALWDKYKKDYEEKLAA---QPEVSIVVTL--PDGKTVEAKAWRTTP 186
SE+ P FI +RL L++ KKD++ LA + + S ++T+ DG+TV+ + W+TTP
Sbjct: 122 SEVKHQPIFIKERLKLFEILKKDHQLLLAIYGKKGDTSNIITVRVADGQTVQGEVWKTTP 181
Query: 187 YDVAKGISQGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAHMLG 366
Y VA ISQ LA+ST+IA+VN ELWDLDRPLEGD LELL +DN +AQ+V+WHSSAH+LG
Sbjct: 182 YQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYWHSSAHILG 241
Query: 367 EAMERVYGGCLCYGPPIEEGFYYDMY 444
EAME YGG LCYGPPIE GFYYDM+
Sbjct: 242 EAMELYYGGHLCYGPPIENGFYYDMF 267
>BC009997-1|AAH09997.1| 718|Homo sapiens threonyl-tRNA synthetase
2, mitochondrial (putative) protein.
Length = 718
Score = 126 bits (305), Expect = 3e-29
Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 3/138 (2%)
Frame = +1
Query: 40 PEFINKRLALWDKYKKDYEEKLA--AQPEV-SIVVTLPDGKTVEAKAWRTTPYDVAKGIS 210
P ++ +RL L+++ ++LA AQ E +I ++LP G+ ++A AW TTPY +A+ IS
Sbjct: 29 PRWLAERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQIS 88
Query: 211 QGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAHMLGEAMERVYG 390
LAD+ + A+VN E +DL+RPLE D L L +D+ + ++VFWHSS H+LG A E+ G
Sbjct: 89 STLADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLG 148
Query: 391 GCLCYGPPIEEGFYYDMY 444
LC GP E GFY+D +
Sbjct: 149 AVLCRGPSTEYGFYHDFF 166
>BC007824-1|AAH07824.2| 709|Homo sapiens TARS2 protein protein.
Length = 709
Score = 126 bits (305), Expect = 3e-29
Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 3/138 (2%)
Frame = +1
Query: 40 PEFINKRLALWDKYKKDYEEKLA--AQPEV-SIVVTLPDGKTVEAKAWRTTPYDVAKGIS 210
P ++ +RL L+++ ++LA AQ E +I ++LP G+ ++A AW TTPY +A+ IS
Sbjct: 20 PRWLAERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQIS 79
Query: 211 QGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAHMLGEAMERVYG 390
LAD+ + A+VN E +DL+RPLE D L L +D+ + ++VFWHSS H+LG A E+ G
Sbjct: 80 STLADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLG 139
Query: 391 GCLCYGPPIEEGFYYDMY 444
LC GP E GFY+D +
Sbjct: 140 AVLCRGPSTEYGFYHDFF 157
>BC000541-1|AAH00541.1| 718|Homo sapiens threonyl-tRNA synthetase
2, mitochondrial (putative) protein.
Length = 718
Score = 126 bits (305), Expect = 3e-29
Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 3/138 (2%)
Frame = +1
Query: 40 PEFINKRLALWDKYKKDYEEKLA--AQPEV-SIVVTLPDGKTVEAKAWRTTPYDVAKGIS 210
P ++ +RL L+++ ++LA AQ E +I ++LP G+ ++A AW TTPY +A+ IS
Sbjct: 29 PRWLAERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQIS 88
Query: 211 QGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAHMLGEAMERVYG 390
LAD+ + A+VN E +DL+RPLE D L L +D+ + ++VFWHSS H+LG A E+ G
Sbjct: 89 STLADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLG 148
Query: 391 GCLCYGPPIEEGFYYDMY 444
LC GP E GFY+D +
Sbjct: 149 AVLCRGPSTEYGFYHDFF 166
>AL356356-3|CAI15489.1| 588|Homo sapiens threonyl-tRNA synthetase
2, mitochondrial (putative) protein.
Length = 588
Score = 126 bits (305), Expect = 3e-29
Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 3/138 (2%)
Frame = +1
Query: 40 PEFINKRLALWDKYKKDYEEKLA--AQPEV-SIVVTLPDGKTVEAKAWRTTPYDVAKGIS 210
P ++ +RL L+++ ++LA AQ E +I ++LP G+ ++A AW TTPY +A+ IS
Sbjct: 29 PRWLAERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQIS 88
Query: 211 QGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAHMLGEAMERVYG 390
LAD+ + A+VN E +DL+RPLE D L L +D+ + ++VFWHSS H+LG A E+ G
Sbjct: 89 STLADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLG 148
Query: 391 GCLCYGPPIEEGFYYDMY 444
LC GP E GFY+D +
Sbjct: 149 AVLCRGPSTEYGFYHDFF 166
>AL356356-2|CAI15488.1| 718|Homo sapiens threonyl-tRNA synthetase
2, mitochondrial (putative) protein.
Length = 718
Score = 126 bits (305), Expect = 3e-29
Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 3/138 (2%)
Frame = +1
Query: 40 PEFINKRLALWDKYKKDYEEKLA--AQPEV-SIVVTLPDGKTVEAKAWRTTPYDVAKGIS 210
P ++ +RL L+++ ++LA AQ E +I ++LP G+ ++A AW TTPY +A+ IS
Sbjct: 29 PRWLAERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQIS 88
Query: 211 QGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAHMLGEAMERVYG 390
LAD+ + A+VN E +DL+RPLE D L L +D+ + ++VFWHSS H+LG A E+ G
Sbjct: 89 STLADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLG 148
Query: 391 GCLCYGPPIEEGFYYDMY 444
LC GP E GFY+D +
Sbjct: 149 AVLCRGPSTEYGFYHDFF 166
>AK222814-1|BAD96534.1| 718|Homo sapiens threonyl-tRNA
synthetase-like 1 variant protein.
Length = 718
Score = 126 bits (305), Expect = 3e-29
Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 3/138 (2%)
Frame = +1
Query: 40 PEFINKRLALWDKYKKDYEEKLA--AQPEV-SIVVTLPDGKTVEAKAWRTTPYDVAKGIS 210
P ++ +RL L+++ ++LA AQ E +I ++LP G+ ++A AW TTPY +A+ IS
Sbjct: 29 PRWLAERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQIS 88
Query: 211 QGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAHMLGEAMERVYG 390
LAD+ + A+VN E +DL+RPLE D L L +D+ + ++VFWHSS H+LG A E+ G
Sbjct: 89 STLADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLG 148
Query: 391 GCLCYGPPIEEGFYYDMY 444
LC GP E GFY+D +
Sbjct: 149 AVLCRGPSTEYGFYHDFF 166
>AK022590-1|BAB14117.1| 588|Homo sapiens protein ( Homo sapiens
cDNA FLJ12528 fis, clone NT2RM4000155, moderately
similar to THREONYL-TRNA SYNTHETASE, CYTOPLASMIC (EC
6.1.1.3). ).
Length = 588
Score = 126 bits (305), Expect = 3e-29
Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 3/138 (2%)
Frame = +1
Query: 40 PEFINKRLALWDKYKKDYEEKLA--AQPEV-SIVVTLPDGKTVEAKAWRTTPYDVAKGIS 210
P ++ +RL L+++ ++LA AQ E +I ++LP G+ ++A AW TTPY +A+ IS
Sbjct: 29 PRWLAERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQIS 88
Query: 211 QGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSVFWHSSAHMLGEAMERVYG 390
LAD+ + A+VN E +DL+RPLE D L L +D+ + ++VFWHSS H+LG A E+ G
Sbjct: 89 STLADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLG 148
Query: 391 GCLCYGPPIEEGFYYDMY 444
LC GP E GFY+D +
Sbjct: 149 AVLCRGPSTEYGFYHDFF 166
>AK056653-1|BAB71241.1| 707|Homo sapiens protein ( Homo sapiens
cDNA FLJ32091 fis, clone OCBBF2000824, moderately
similar to THREONYL-TRNA SYNTHETASE, CYTOPLASMIC (EC
6.1.1.3). ).
Length = 707
Score = 103 bits (248), Expect = 2e-22
Identities = 54/104 (51%), Positives = 73/104 (70%), Gaps = 5/104 (4%)
Frame = +1
Query: 22 SELNPWPEFINKRLALWDKYKKDYEEKLAA---QPEVSIVVTL--PDGKTVEAKAWRTTP 186
SE+ P FI +RL L++ KKD++ LA + + S ++T+ DG+TV+ + W+TTP
Sbjct: 122 SEVKHQPIFIKERLKLFEILKKDHQLLLAIYGKKGDTSNIITVRAADGQTVQGEVWKTTP 181
Query: 187 YDVAKGISQGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDN 318
Y VA ISQ LA+ST+IA+VN ELWDLD PLEGD LELL +DN
Sbjct: 182 YQVAAEISQELAESTVIAKVNGELWDLDCPLEGDSSLELLTFDN 225
>AL356356-1|CAI15487.1| 178|Homo sapiens threonyl-tRNA synthetase
2, mitochondrial (putative) protein.
Length = 178
Score = 79.4 bits (187), Expect = 5e-15
Identities = 41/102 (40%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Frame = +1
Query: 40 PEFINKRLALWDKYKKDYEEKLA--AQPEV-SIVVTLPDGKTVEAKAWRTTPYDVAKGIS 210
P ++ +RL L+++ ++LA AQ E +I ++LP G+ ++A AW TTPY +A+ IS
Sbjct: 29 PRWLAERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQIS 88
Query: 211 QGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSV 336
LAD+ + A+VN E +DL+RPLE D L L +D+ + ++V
Sbjct: 89 STLADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAV 130
>BC107719-1|AAI07720.1| 338|Homo sapiens mitochondrial ribosomal
protein L39 protein.
Length = 338
Score = 50.4 bits (115), Expect = 3e-06
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Frame = +1
Query: 73 DKYKKDYEEKLAAQPEVSIVVTLPDGKTVEAKAWR-----TTPYDVAKGISQGLADSTII 237
D + K+ +L+ P + GKT + +TPY A +S+ +I+
Sbjct: 46 DLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRKSIL 105
Query: 238 ARVNNELWDLDRPLEGDCKLELLRWDNTDAQSV---FWHSSAHMLGEAMERVY 387
A V+ + WD+ +PL C+++ L + + D V +W S A M+G +ER +
Sbjct: 106 ALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCVIERAF 158
>BC004896-1|AAH04896.2| 333|Homo sapiens MRPL39 protein protein.
Length = 333
Score = 50.4 bits (115), Expect = 3e-06
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Frame = +1
Query: 73 DKYKKDYEEKLAAQPEVSIVVTLPDGKTVEAKAWR-----TTPYDVAKGISQGLADSTII 237
D + K+ +L+ P + GKT + +TPY A +S+ +I+
Sbjct: 41 DLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRKSIL 100
Query: 238 ARVNNELWDLDRPLEGDCKLELLRWDNTDAQSV---FWHSSAHMLGEAMERVY 387
A V+ + WD+ +PL C+++ L + + D V +W S A M+G +ER +
Sbjct: 101 ALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCVIERAF 153
>AF239727-1|AAF44696.1| 296|Homo sapiens unknown protein.
Length = 296
Score = 50.4 bits (115), Expect = 3e-06
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Frame = +1
Query: 73 DKYKKDYEEKLAAQPEVSIVVTLPDGKTVEAKAWR-----TTPYDVAKGISQGLADSTII 237
D + K+ +L+ P + GKT + +TPY A +S+ +I+
Sbjct: 4 DLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRKSIL 63
Query: 238 ARVNNELWDLDRPLEGDCKLELLRWDNTDAQSV---FWHSSAHMLGEAMERVY 387
A V+ + WD+ +PL C+++ L + + D V +W S A M+G +ER +
Sbjct: 64 ALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNEAYWRSCAMMMGCVIERAF 116
>AF109357-1|AAQ13505.1| 333|Homo sapiens MSTP003 protein.
Length = 333
Score = 50.4 bits (115), Expect = 3e-06
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Frame = +1
Query: 73 DKYKKDYEEKLAAQPEVSIVVTLPDGKTVEAKAWR-----TTPYDVAKGISQGLADSTII 237
D + K+ +L+ P + GKT + +TPY A +S+ +I+
Sbjct: 41 DLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRKSIL 100
Query: 238 ARVNNELWDLDRPLEGDCKLELLRWDNTDAQSV---FWHSSAHMLGEAMERVY 387
A V+ + WD+ +PL C+++ L + + D V +W S A M+G +ER +
Sbjct: 101 ALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCVIERAF 153
>AK000458-1|BAA91177.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ20451 fis, clone KAT05657. ).
Length = 258
Score = 49.2 bits (112), Expect = 6e-06
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +1
Query: 178 TTPYDVAKGISQGLADSTIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQSV---FWHS 348
+TPY A +S+ +I+A V+ + WD+ +PL C+++ L + + D V +W S
Sbjct: 6 STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNEAYWRS 65
Query: 349 SAHMLGEAMERVY 387
A M+G +ER +
Sbjct: 66 CAMMMGCVIERAF 78
>BC057231-1|AAH57231.1| 439|Homo sapiens STIM2 protein protein.
Length = 439
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 284 VIASWNS--CVGITQMPRVFFGIPQHICLGKLWKECTEVVYAMGLPLKRGSIMTC 442
V SW S CVG+T+ + F + G L K C+ + G+P+ + +C
Sbjct: 337 VDVSWGSPDCVGLTETKSMIFSPASKVYNGILEKSCSMNQLSSGIPVPKPRHTSC 391
>BC015659-1|AAH15659.2| 555|Homo sapiens STIM2 protein protein.
Length = 555
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 284 VIASWNS--CVGITQMPRVFFGIPQHICLGKLWKECTEVVYAMGLPLKRGSIMTC 442
V SW S CVG+T+ + F + G L K C+ + G+P+ + +C
Sbjct: 453 VDVSWGSPDCVGLTETKSMIFSPASKVYNGILEKSCSMNQLSSGIPVPKPRHTSC 507
>AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein
protein.
Length = 769
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 284 VIASWNS--CVGITQMPRVFFGIPQHICLGKLWKECTEVVYAMGLPLKRGSIMTC 442
V SW S CVG+T+ + F + G L K C+ + G+P+ + +C
Sbjct: 667 VDVSWGSPDCVGLTETKSMIFSPASKVYNGILEKSCSMNQLSSGIPVPKPRHTSC 721
>AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction
molecule 2 protein.
Length = 746
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 284 VIASWNS--CVGITQMPRVFFGIPQHICLGKLWKECTEVVYAMGLPLKRGSIMTC 442
V SW S CVG+T+ + F + G L K C+ + G+P+ + +C
Sbjct: 644 VDVSWGSPDCVGLTETKSMIFSPASKVYNGILEKSCSMNQLSSGIPVPKPRHTSC 698
>AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein.
Length = 818
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 284 VIASWNS--CVGITQMPRVFFGIPQHICLGKLWKECTEVVYAMGLPLKRGSIMTC 442
V SW S CVG+T+ + F + G L K C+ + G+P+ + +C
Sbjct: 716 VDVSWGSPDCVGLTETKSMIFSPASKVYNGILEKSCSMNQLSSGIPVPKPRHTSC 770
>BC151219-1|AAI51220.1| 581|Homo sapiens matrilin 4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 412 EAHSIDNLRTLFP*LPQAYVLRNAKKHSGHLCYPNAGVPTCNHLRVADP-GPRAHC 248
E H +++ + F +VL+ ++ + Y + G +C H V+ P GPR HC
Sbjct: 227 EHHCVNSPGSYFCHCQVGFVLQQDQRSCRAIDYCSFGNHSCQHECVSTPGGPRCHC 282
>BC131763-1|AAI31764.1| 581|Homo sapiens matrilin 4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 412 EAHSIDNLRTLFP*LPQAYVLRNAKKHSGHLCYPNAGVPTCNHLRVADP-GPRAHC 248
E H +++ + F +VL+ ++ + Y + G +C H V+ P GPR HC
Sbjct: 227 EHHCVNSPGSYFCHCQVGFVLQQDQRSCRAIDYCSFGNHSCQHECVSTPGGPRCHC 282
>AL021578-3|CAB46380.1| 622|Homo sapiens matrilin 4 protein.
Length = 622
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 412 EAHSIDNLRTLFP*LPQAYVLRNAKKHSGHLCYPNAGVPTCNHLRVADP-GPRAHC 248
E H +++ + F +VL+ ++ + Y + G +C H V+ P GPR HC
Sbjct: 268 EHHCVNSPGSYFCHCQVGFVLQQDQRSCRAIDYCSFGNHSCQHECVSTPGGPRCHC 323
>AL021578-2|CAB39280.1| 581|Homo sapiens matrilin 4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 412 EAHSIDNLRTLFP*LPQAYVLRNAKKHSGHLCYPNAGVPTCNHLRVADP-GPRAHC 248
E H +++ + F +VL+ ++ + Y + G +C H V+ P GPR HC
Sbjct: 227 EHHCVNSPGSYFCHCQVGFVLQQDQRSCRAIDYCSFGNHSCQHECVSTPGGPRCHC 282
>AL021578-1|CAI21077.1| 432|Homo sapiens matrilin 4 protein.
Length = 432
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 412 EAHSIDNLRTLFP*LPQAYVLRNAKKHSGHLCYPNAGVPTCNHLRVADP-GPRAHC 248
E H +++ + F +VL+ ++ + Y + G +C H V+ P GPR HC
Sbjct: 78 EHHCVNSPGSYFCHCQVGFVLQQDQRSCRAIDYCSFGNHSCQHECVSTPGGPRCHC 133
>AJ007581-1|CAA07569.1| 581|Homo sapiens matrilin-4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 412 EAHSIDNLRTLFP*LPQAYVLRNAKKHSGHLCYPNAGVPTCNHLRVADP-GPRAHC 248
E H +++ + F +VL+ ++ + Y + G +C H V+ P GPR HC
Sbjct: 227 EHHCVNSPGSYFCHCQVGFVLQQDQRSCRAIDYCSFGNHSCQHECVSTPGGPRCHC 282
>BC054502-1|AAH54502.1| 947|Homo sapiens GREB1 protein protein.
Length = 947
Score = 28.7 bits (61), Expect = 9.7
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 199 LQHHMVWFSMLLLQQSSRLAMLPLC*LQVGQQVSLHNLSCTYPKVLNV-C**ILAKGSIL 23
LQHH F L L+ + C L +G Q+S+ +S + P LN+ C +L G +L
Sbjct: 816 LQHHSHLFFPLSLKNHDHPVLSVDCYLNLGSQISVCYVS-SRPHSLNISCSDLLFSGLLL 874
Query: 22 TLTLSLV 2
L S V
Sbjct: 875 YLCDSFV 881
>AC011994-1|AAX88907.1| 1949|Homo sapiens unknown protein.
Length = 1949
Score = 28.7 bits (61), Expect = 9.7
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 199 LQHHMVWFSMLLLQQSSRLAMLPLC*LQVGQQVSLHNLSCTYPKVLNV-C**ILAKGSIL 23
LQHH F L L+ + C L +G Q+S+ +S + P LN+ C +L G +L
Sbjct: 1818 LQHHSHLFFPLSLKNHDHPVLSVDCYLNLGSQISVCYVS-SRPHSLNISCSDLLFSGLLL 1876
Query: 22 TLTLSLV 2
L S V
Sbjct: 1877 YLCDSFV 1883
>AB011147-1|BAA25501.2| 952|Homo sapiens KIAA0575 protein protein.
Length = 952
Score = 28.7 bits (61), Expect = 9.7
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 199 LQHHMVWFSMLLLQQSSRLAMLPLC*LQVGQQVSLHNLSCTYPKVLNV-C**ILAKGSIL 23
LQHH F L L+ + C L +G Q+S+ +S + P LN+ C +L G +L
Sbjct: 821 LQHHSHLFFPLSLKNHDHPVLSVDCYLNLGSQISVCYVS-SRPHSLNISCSDLLFSGLLL 879
Query: 22 TLTLSLV 2
L S V
Sbjct: 880 YLCDSFV 886
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.136 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,794,301
Number of Sequences: 237096
Number of extensions: 1583403
Number of successful extensions: 3223
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3213
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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