Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F23
(301 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical pr... 70 4e-13
AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein. 70 4e-13
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 0.62
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 0.62
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 27 2.5
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 26 4.4
Z22176-8|CAA80138.1| 220|Caenorhabditis elegans Hypothetical pr... 25 7.6
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 25 7.6
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 25 7.6
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 25 7.6
>Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical
protein C47E8.7 protein.
Length = 720
Score = 69.7 bits (163), Expect = 4e-13
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +3
Query: 111 LADGEVVGDGSWNLTIYVTDLSEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALW 290
L +G + DG W L I VTDL+ +R++ V G++++GG+ML+L + ++DWSDHALW
Sbjct: 4 LVEGTSIIDGKWQLPILVTDLNIQRSISVLGNLNVGGLMLELVSEC--DVERDWSDHALW 61
Query: 291 WP 296
WP
Sbjct: 62 WP 63
>AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein.
Length = 720
Score = 69.7 bits (163), Expect = 4e-13
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +3
Query: 111 LADGEVVGDGSWNLTIYVTDLSEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALW 290
L +G + DG W L I VTDL+ +R++ V G++++GG+ML+L + ++DWSDHALW
Sbjct: 4 LVEGTSIIDGKWQLPILVTDLNIQRSISVLGNLNVGGLMLELVSEC--DVERDWSDHALW 61
Query: 291 WP 296
WP
Sbjct: 62 WP 63
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.1 bits (62), Expect = 0.62
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 96 NS*KMLADGEVVGDGSWNLTIYVTDLSEK 182
N + A G V+GD S NLTI+ T++ K
Sbjct: 1240 NCESLTASGHVLGDSSTNLTIHSTNIHSK 1268
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.1 bits (62), Expect = 0.62
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 96 NS*KMLADGEVVGDGSWNLTIYVTDLSEK 182
N + A G V+GD S NLTI+ T++ K
Sbjct: 1240 NCESLTASGHVLGDSSTNLTIHSTNIHSK 1268
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 144 WNLTIYVTDLSEKRTMVVKGDMHIGGVMLKLTESFGKEFKKD 269
WN Y T+ EK+T++VK + + K E +E +++
Sbjct: 988 WNSLAYATEYEEKQTIIVKKIQQLRDLNQKSIEDQERETREN 1029
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 129 VGDGSWNLTIYVTDLSEKRTMVVKGDMHIGGVML--KLTESFGKEFKK 266
+G G++++++ D + GD H+GG ++ E F K +KK
Sbjct: 227 LGGGTFDVSLLTIDSGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKK 274
>Z22176-8|CAA80138.1| 220|Caenorhabditis elegans Hypothetical
protein ZK1098.9 protein.
Length = 220
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 148 FHDPSPTTSPSANIFYEFYYTLSLKLSH 65
+H P+P TS + IF+ YT S K H
Sbjct: 149 YHAPAPVTSLLSLIFF-IVYTFSAKAPH 175
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 129 VGDGSWNLTIYVTDLSEKRTMVVKGDMHIGGVML--KLTESFGKEFKK 266
+G G++++++ D + GD H+GG ++ E F K +KK
Sbjct: 230 LGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKK 277
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 129 VGDGSWNLTIYVTDLSEKRTMVVKGDMHIGGVML--KLTESFGKEFKK 266
+G G++++++ D + GD H+GG ++ E F K +KK
Sbjct: 230 LGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKK 277
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +3
Query: 6 RRAI*VDVFDRIKCSRCFYECDNF 77
R + +++ R++CS CF++ D+F
Sbjct: 21 RGVVSLEMASRLECSICFFDFDDF 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,982,653
Number of Sequences: 27780
Number of extensions: 128316
Number of successful extensions: 309
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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