Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F22
(373 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 37 0.004
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 34 0.026
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 33 0.046
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 33 0.061
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 33 0.080
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 32 0.14
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 31 0.18
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 31 0.32
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 31 0.32
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 30 0.43
At1g30220.1 68414.m03697 sugar transporter family protein simila... 29 0.75
At5g57000.1 68418.m07114 expressed protein similar to unknown pr... 28 1.7
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi... 28 1.7
At2g46530.2 68415.m05803 transcriptional factor B3 family protei... 27 3.0
At2g46530.1 68415.m05802 transcriptional factor B3 family protei... 27 3.0
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot... 27 4.0
At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family pr... 27 4.0
At2g36730.1 68415.m04506 pentatricopeptide (PPR) repeat-containi... 27 4.0
At2g43330.1 68415.m05388 sugar transporter family protein simila... 27 5.3
At1g07650.1 68414.m00821 leucine-rich repeat transmembrane prote... 27 5.3
At5g67640.1 68418.m08528 expressed protein ; expression support... 26 7.0
At5g17920.1 68418.m02101 5-methyltetrahydropteroyltriglutamate--... 26 7.0
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 26 7.0
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 26 7.0
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 26 9.2
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 26 9.2
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 26 9.2
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 26 9.2
At1g26110.1 68414.m03186 expressed protein 26 9.2
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 37.1 bits (82), Expect = 0.004
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 24 NADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 134
+ D+ + WI++G P K VLG S G W L +D +
Sbjct: 227 SGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDKD 263
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 34.3 bits (75), Expect = 0.026
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 30 DAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 134
D + +W++ G P K V G G +W LD D +
Sbjct: 204 DTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDKD 238
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 33.5 bits (73), Expect = 0.046
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 24 NADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPP 152
+ DA WIQ G P K VLG G W+L + + S P
Sbjct: 234 SGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAP 276
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 33.1 bits (72), Expect = 0.061
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 30 DAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 134
D + WI+ G P K VLG G TW L S ++
Sbjct: 224 DYGLKEWIKAGLPAKKAVLGFPYVGWTWSLGSGND 258
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 32.7 bits (71), Expect = 0.080
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 21 QNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQ 200
++ D+ + W + G P K VLG G W L +D +++G + GP
Sbjct: 211 RSGDSGVRDWTEAGLPAKKAVLGFPYYGWAWTL-ADPDVNGY------DANTTGPAISDD 263
Query: 201 GLLSYPEI 224
G +SY ++
Sbjct: 264 GEISYRQL 271
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 31.9 bits (69), Expect = 0.14
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 21 QNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISG 143
++ D+ ++ W++ P K VLG S G W L+ D+E +G
Sbjct: 222 RSGDSGLSKWLEAKLPAKKAVLGFSYCGWAWTLE-DAENNG 261
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 31.5 bits (68), Expect = 0.18
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 24 NADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQG 203
+ DA + W Q G P K VLG G W L +D++ H +GP G
Sbjct: 232 SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCL-TDAK------NHNYYANSSGPAISPDG 284
Query: 204 LLSYPEI 224
+ Y +I
Sbjct: 285 SIGYDQI 291
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 30.7 bits (66), Expect = 0.32
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 60 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQGLLSYPEICAKL 236
G+ KL G ST G +W D S+ GV I+A GGE Y K + L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306
Query: 237 INPNQNGKRPHLRKVNDPSK 296
Q+ + P +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 30.7 bits (66), Expect = 0.32
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 60 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQGLLSYPEICAKL 236
G+ KL G ST G +W D S+ GV I+A GGE Y K + L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306
Query: 237 INPNQNGKRPHLRKVNDPSK 296
Q+ + P +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 30.3 bits (65), Expect = 0.43
Identities = 19/67 (28%), Positives = 25/67 (37%)
Frame = +3
Query: 24 NADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQG 203
+ D+ + WI G P K VLG G W L P H GP G
Sbjct: 125 SGDSGVKDWIDAGLPAEKAVLGFPYYGWAWTLAD-------PKNHGYYVDTTGPAISDDG 177
Query: 204 LLSYPEI 224
+SY ++
Sbjct: 178 EISYSQL 184
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 29.5 bits (63), Expect = 0.75
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 13 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 123
++Y +PT++ + GF R LSLV+A L+ GS I
Sbjct: 294 VMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGSII 330
>At5g57000.1 68418.m07114 expressed protein similar to unknown
protein (gb|AAF21159.1)
Length = 187
Score = 28.3 bits (60), Expect = 1.7
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 366 LRKKPRSHLHHYHQE 322
L++KP HLHH+H+E
Sbjct: 87 LKEKPPRHLHHHHKE 101
>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
PF02401 LytB protein
Length = 466
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 78 LVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQGLLSYPEICAK 233
LV+G + T L SE G+P D GP K+ L Y E+ K
Sbjct: 372 LVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEK 423
>At2g46530.2 68415.m05803 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 514
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 217 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 327
+ F+P+ LTPT T+ RS ++ + G P+ S+FL
Sbjct: 263 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 300
>At2g46530.1 68415.m05802 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 601
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 217 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 327
+ F+P+ LTPT T+ RS ++ + G P+ S+FL
Sbjct: 350 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 387
>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
similar to 5.9 kb fsh membrane protein [Drosophila
melanogaster] GI:157455; contains Pfam profile PF00439:
Bromodomain
Length = 590
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 240 NPNQNGKRPHLRKVNDPSKRFGTYA 314
NPN N +R + K D S FG+YA
Sbjct: 44 NPNPNFERSNSSKQCDDSSEFGSYA 68
>At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family
protein bHLH protein, Arabidopsis thaliana,
PATCHX:E255557
Length = 589
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 282 NDPSKRFGTYAFRLPDDNGEG--GFWVS 359
N+ FG++AF L D GE G W+S
Sbjct: 253 NNGGGEFGSWAFNLNPDQGENDPGLWIS 280
>At2g36730.1 68415.m04506 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 501
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 317 EGIGPKTFARIVDLTKMRTLSVLVGVNKFG-ANFW 216
EGIG K R+++L R+ ++++ N+F A W
Sbjct: 401 EGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMW 435
>At2g43330.1 68415.m05388 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens], SP|Q01440 Membrane transporter D1
{Leishmania donovani}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 509
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 13 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 123
++Y +PT++ + GF +L LSL+ A ++ G+ +
Sbjct: 294 VMYYSPTIVQMAGFHSNQLALFLSLIVAAMNAAGTVV 330
>At1g07650.1 68414.m00821 leucine-rich repeat transmembrane protein
kinase, putative similar to GB:AAC50043 from
[Arabidopsis thaliana] (Plant Mol. Biol. 37 (4), 587-596
(1998))
Length = 1014
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -3
Query: 362 VRNPEATFTIIIRKAEGIGPKTFARIVDLTKMRTLSV 252
++N E+ T+I+RK + IGP I DL K++TL +
Sbjct: 277 LKNLESIKTLILRKCKIIGPIP-KYIGDLKKLKTLDL 312
>At5g67640.1 68418.m08528 expressed protein ; expression supported
by MPSS
Length = 201
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/83 (21%), Positives = 35/83 (42%)
Frame = +3
Query: 51 IQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQGLLSYPEICA 230
++ A K V+G + + + + +E G +V G +S IC+
Sbjct: 91 LKEEAARRKKVIGPLLPTEMLQTHDERSVGDACGSNVEEEDSDGGEEEVDGSIS--NICS 148
Query: 231 KLINPNQNGKRPHLRKVNDPSKR 299
+L+ PN K+ L ND +++
Sbjct: 149 QLVRPNAQEKKEGLIGDNDKTRK 171
>At5g17920.1 68418.m02101
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase / vitamin-B12-independent methionine
synthase / cobalamin-independent methionine synthase
(CIMS) identical to SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana}
Length = 765
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +3
Query: 24 NADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAG 182
+AD + W Q A K + + LD+ + + VPP + GGE G
Sbjct: 38 SADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPPRYGYTGGEIG 90
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 26.2 bits (55), Expect = 7.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 192 WYKDQLHHPH 163
WY +Q HHPH
Sbjct: 48 WYSNQFHHPH 57
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 26.2 bits (55), Expect = 7.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 192 WYKDQLHHPH 163
WY +Q HHPH
Sbjct: 48 WYSNQFHHPH 57
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 216 GSLINLELWYKDQLHHPHRRVSVEL 142
G ++NL L +++ + HP RV EL
Sbjct: 171 GDMVNLNLDWREAVPHPDDRVEYEL 195
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 216 GSLINLELWYKDQLHHPHRRVSVEL 142
G ++NL L +++ + HP RV EL
Sbjct: 171 GDMVNLNLDWREAVPHPDDRVEYEL 195
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 216 GSLINLELWYKDQLHHPHRRVSVEL 142
G ++NL L +++ + HP RV EL
Sbjct: 171 GDMVNLNLDWREAVPHPDDRVEYEL 195
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 216 GSLINLELWYKDQLHHPHRRVSVEL 142
G ++NL L +++ + HP RV EL
Sbjct: 171 GDMVNLNLDWREAVPHPDDRVEYEL 195
>At1g26110.1 68414.m03186 expressed protein
Length = 611
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 208 NKP*TLV*GPASPPSSACIGGTPEISLSESSFHVRPVVLI 89
NKP ++V GP SPP + + P +S S +P L+
Sbjct: 327 NKP-SVVTGPISPPQTTPLTSAPVAGVSSSISQDKPKPLL 365
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,024,934
Number of Sequences: 28952
Number of extensions: 197714
Number of successful extensions: 570
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 497853200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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