Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F21
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   5.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   5.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.8  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 18  IYGSILREVHRLFRRSC*KIFS 83
           + G+ILR +HR F  +  ++F+
Sbjct: 279 VIGNILRLMHRRFEITALRLFT 300


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 137 GKVSNWERIHRMYYC 181
           G V  WER  R Y C
Sbjct: 715 GWVEVWERKRRQYLC 729


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 151 VAYFPTSVPLLHELRYIVNHYTKL 80
           V  FPT +   ++++++VN +  L
Sbjct: 217 VTRFPTELTFCNKIKHLVNLHKNL 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,618
Number of Sequences: 336
Number of extensions: 2609
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)