Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F21
(481 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56819| Best HMM Match : COesterase (HMM E-Value=0) 31 0.37
SB_6595| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.37
SB_30328| Best HMM Match : TatC (HMM E-Value=0.42) 31 0.49
SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 31 0.65
SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0) 30 0.86
SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0) 30 0.86
SB_33924| Best HMM Match : DUF310 (HMM E-Value=4.2) 30 0.86
SB_22868| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_53454| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8) 29 2.0
SB_32176| Best HMM Match : Keratin_B2 (HMM E-Value=0.53) 29 2.0
SB_8524| Best HMM Match : Keratin_B2 (HMM E-Value=0.53) 29 2.0
SB_8772| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_50806| Best HMM Match : EGF_CA (HMM E-Value=1e-27) 28 4.6
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
Length = 613
Score = 31.5 bits (68), Expect = 0.37
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 301 AKIPGSRNVLLRFYPPQSALEANSRKQKVYEQQGKRR 411
A+ PG+R V R PP +A A+ Q++ EQ+ KR+
Sbjct: 86 ARKPGARCVYGRVMPPMAAKPASPENQRMKEQRKKRK 122
>SB_6595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 31.5 bits (68), Expect = 0.37
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 115 RVEEEHLWESKQLGAHSPHVLLSTLMFFNTKHFN 216
+V ++HL +S SPHV+ + LMF N K FN
Sbjct: 272 KVIKQHLADSSVRSPRSPHVIFNALMFLNEK-FN 304
>SB_30328| Best HMM Match : TatC (HMM E-Value=0.42)
Length = 341
Score = 31.1 bits (67), Expect = 0.49
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = -3
Query: 263 IICEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCE 96
++CE I +STV C + V CG S ++ C + T+ CE
Sbjct: 172 VVCELYGAIVTSTVACELCGAIVTSTVVCELCGAIVTSTVVCELCGAFVTSTVVCE 227
Score = 31.1 bits (67), Expect = 0.49
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = -3
Query: 263 IICEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCE 96
++CE I +STV C + V CG S ++ C + T+ CE
Sbjct: 263 VVCELCGAIVTSTVACELCGAIVTSTVVCELCGAIVTSTVVCELCGAFVTSTVVCE 318
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = -3
Query: 263 IICEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCE 96
++CE +STV C + V CG S ++ C + T+ CE
Sbjct: 250 VVCELCGAFVTSTVVCELCGAIVTSTVACELCGAIVTSTVVCELCGAIVTSTVVCE 305
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/56 (26%), Positives = 21/56 (37%)
Frame = -3
Query: 263 IICEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCE 96
++CE I +STV C V CG S + C + T+ CE
Sbjct: 237 VVCELYGAIVTSTVVCELCGAFVTSTVVCELCGAIVTSTVACELCGAIVTSTVVCE 292
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/56 (26%), Positives = 22/56 (39%)
Frame = -3
Query: 263 IICEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCE 96
+ CE I +STV C + V CG S ++ C + T+ CE
Sbjct: 185 VACELCGAIVTSTVVCELCGAIVTSTVVCELCGAFVTSTVVCELCGAIVTSTVVCE 240
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/56 (26%), Positives = 22/56 (39%)
Frame = -3
Query: 263 IICEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCE 96
+ CE I +STV C + V CG S ++ C + T+ CE
Sbjct: 276 VACELCGAIVTSTVVCELCGAIVTSTVVCELCGAFVTSTVVCELCGAIVTSTVVCE 331
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = -3
Query: 263 IICEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCE 96
++CE I +STV + V CG S ++ C + T+ CE
Sbjct: 120 VVCELYGAIVTSTVVCELYGAIVTSTVACELCGAIVTSTVVCELCGAFVTSTVVCE 175
>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
Length = 1644
Score = 30.7 bits (66), Expect = 0.65
Identities = 15/56 (26%), Positives = 22/56 (39%)
Frame = -3
Query: 263 IICEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCE 96
++CE I +STV C V CG S ++ C + T+ CE
Sbjct: 894 VVCELCGAIVTSTVVCELCGAFVTSTVVCELCGAIVTSTVICELCGAFVTSTVVCE 949
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = -3
Query: 263 IICEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCESLYK 84
++CE +STV C + V CG S ++ C + T+ C+ +
Sbjct: 907 VVCELCGAFVTSTVVCELCGAIVTSTVICELCGAFVTSTVVCELCGAFVTSTVVCDGAFV 966
Query: 83 T 81
T
Sbjct: 967 T 967
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = -3
Query: 263 IICEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCESLYK 84
++CE I +STV C + V CG S ++ + T+ C+ +
Sbjct: 1139 VVCELYGAIVTSTVVCELCGAIVTSTVVCELCGAFVTSTVVCELYGAFVTSTVVCDGAFV 1198
Query: 83 T 81
T
Sbjct: 1199 T 1199
>SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1202
Score = 30.3 bits (65), Expect = 0.86
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Frame = -3
Query: 302 ACP-G*LGFRFQCFIICE----KDNC----ICSSTVTKLKCFVLKNINVDSNTCGECAPS 150
AC G G F+CF E DNC +C++T C L+ + D TC +
Sbjct: 1024 ACKQGYYGNGFRCFDTDECTYDLDNCHADALCTNTKGSYNCTCLRGYSGDGFTCKDIDEC 1083
Query: 149 CLLSHKCSS-----STRVTIYCESL 90
L H CS +T+ YC L
Sbjct: 1084 ALGIHNCSKDAACINTKGNFYCTCL 1108
>SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1027
Score = 30.3 bits (65), Expect = 0.86
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Frame = -3
Query: 302 ACP-G*LGFRFQCFIICE----KDNC----ICSSTVTKLKCFVLKNINVDSNTCGECAPS 150
AC G G F+CF E DNC +C++T C L+ + D TC +
Sbjct: 438 ACKQGYYGNGFRCFDTDECTYDLDNCHADALCTNTKGSYNCTCLRGYSGDGFTCKDIDEC 497
Query: 149 CLLSHKCSS-----STRVTIYCESL 90
L H CS +T+ YC L
Sbjct: 498 ALGIHNCSKDAACINTKGNFYCTCL 522
>SB_33924| Best HMM Match : DUF310 (HMM E-Value=4.2)
Length = 326
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +1
Query: 37 EKFTDCLDEVARKFSVLYNDSQ-------YIVTRVEEEHLWESKQLGAHSPHVLLSTLMF 195
++F + D +A + L DS+ +T +E+ L+ES + G H+P L T+ +
Sbjct: 120 KEFVESRDVLAARRKALVKDSKGNKPNATKALTDDDEDALFESGEFGDHNPETLQRTVWW 179
Query: 196 FNTKHFNLVTVEEHMQLSFSHI 261
+ HF +E +L + I
Sbjct: 180 LVSLHFGFRERDECRKLCWGDI 201
>SB_22868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 203 VLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCESLYKT 81
V+ + VDS+ G+CA CL + +C+S CE KT
Sbjct: 48 VIDTLEVDSH--GDCASECLANQRCASFNHKENACELNDKT 86
>SB_53454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Frame = +1
Query: 13 NIFTDPYYEKFTDCLDEVARKFSVLY----NDSQYI--VTRVEEEHLWESKQLGAHSPHV 174
NI D + K + L AR+ S++ N+ Q I +T EE+ L+ S Q G H +
Sbjct: 21 NILKDKQFMKSRNLL--AARRKSLVKDGKSNEPQAIRSLTESEEDALFASGQFGFHGQEI 78
Query: 175 LLSTLMFFNTKHFNLVTVEEHMQL 246
T+ +F + HF E ++L
Sbjct: 79 PQRTMWWFISLHFGFRARNEWLKL 102
>SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8)
Length = 232
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 257 CEKDNCICSSTVTKLKCFVLKNINVDSNTCGECAP 153
CE+ C VT+ + ++ I + + T G CAP
Sbjct: 177 CERKCCGIGGEVTQTRACIIATITLTNTTTGACAP 211
>SB_32176| Best HMM Match : Keratin_B2 (HMM E-Value=0.53)
Length = 194
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = -3
Query: 236 CSSTVTKLKCFVLKNINVDSNT-CGECAPSCLLSH-KCSSSTRVTI--YCESLYKTENFL 69
C++ T KC+ V +NT C + + ++ KC S+TR T+ +S T +
Sbjct: 86 CATVATNTKCYSATRATVATNTKCYSATRATVATNTKCYSATRATVATNTKSYSATRATV 145
Query: 68 ATSSK 54
AT +K
Sbjct: 146 ATKTK 150
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 239 ICSSTVTKLKCFVLKNINVDSNT-CGECAPSCLLSH-KCSSSTRVTI 105
+C++ TK C+ V +NT C + + ++ KC S+TR T+
Sbjct: 1 MCATVATKTNCYSATRATVATNTKCYSAKRATVATNTKCYSATRATV 47
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 239 ICSSTVTKLKCFVLKNINVDSNT-CGECAPSCLLSH-KCSSSTRVTI 105
+C++ TK C+ V +NT C + + ++ KC S+TR T+
Sbjct: 57 MCATVATKTNCYSATRATVATNTKCYSVTCATVATNTKCYSATRATV 103
>SB_8524| Best HMM Match : Keratin_B2 (HMM E-Value=0.53)
Length = 194
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = -3
Query: 236 CSSTVTKLKCFVLKNINVDSNT-CGECAPSCLLSH-KCSSSTRVTI--YCESLYKTENFL 69
C++ T KC+ V +NT C + + ++ KC S+TR T+ +S T +
Sbjct: 86 CATVATNTKCYSATRATVATNTKCYSATRATVATNTKCYSATRATVATNTKSYSATRATV 145
Query: 68 ATSSK 54
AT +K
Sbjct: 146 ATKTK 150
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 239 ICSSTVTKLKCFVLKNINVDSNT-CGECAPSCLLSH-KCSSSTRVTI 105
+C++ TK C+ V +NT C + + ++ KC S+TR T+
Sbjct: 1 MCATVATKTNCYSATRATVATNTKCYSAKRATVATNTKCYSATRATV 47
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 239 ICSSTVTKLKCFVLKNINVDSNT-CGECAPSCLLSH-KCSSSTRVTI 105
+C++ TK C+ V +NT C + + ++ KC S+TR T+
Sbjct: 57 MCATVATKTNCYSATRATVATNTKCYSVTCATVATNTKCYSATRATV 103
>SB_8772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 176 NTCGECAPSCLLSHKCSSSTRVTIYCESLYKTE 78
N G P CLL+ K +S VT ++ Y+TE
Sbjct: 106 NYFGPAGPDCLLAGKDASRALVTFSVDNFYQTE 138
>SB_50806| Best HMM Match : EGF_CA (HMM E-Value=1e-27)
Length = 286
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = -3
Query: 248 DNCICSSTVTKLKCFVLKNINVDSNTCGECAPSCLLSHKCSSSTRVTIYCESLYKTE 78
+N +C +T C K + C + L KCSS++ + + YK E
Sbjct: 158 NNAVCKNTAGSYDCVCKKGFEMSDGECKDIDECSLKPAKCSSNS-ICSNTQGSYKCE 213
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 182 DSNTCGECAPSCLLSHKCSSSTRVTIYC 99
D+N EC C L +C + V+ YC
Sbjct: 809 DTNDTDECMKECCLRDECDVAVMVSDYC 836
>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4247
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 284 GFRFQCFIICEKDNCICSSTV 222
G RF F+ C +C+C STV
Sbjct: 930 GERFNSFVYCPGIDCLCCSTV 950
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,812,448
Number of Sequences: 59808
Number of extensions: 304952
Number of successful extensions: 890
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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