Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F21
         (481 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   1.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   1.8  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   3.1  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   7.2  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    22   9.5  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 188 NVDSNTCGECAPSC 147
           +VDS TCG+C   C
Sbjct: 513 SVDSKTCGDCHQEC 526


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 278 EILINQDKRKYLDLEMFCYASIRPSLH*KRIRENRKFTNSKE 403
           E L++Q +RK   LE +  AS    L  +RIR   +  N +E
Sbjct: 706 EQLLDQQRRKVAALERYAAASREHDLLEQRIRLFEERNNDRE 747


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -2

Query: 330 QNISRSRYFRLSWLIRIS--LPMLHYM 256
           Q +S +   +LSW+ R+S  L ++H+M
Sbjct: 382 QQLSAAMKLKLSWVFRVSDILILVHFM 408


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 226 VEEHMQLSFSHIMKH 270
           V  H+QLSF +I+ H
Sbjct: 348 VRPHLQLSFENILAH 362


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 88  YNDS-QYIVTRVEEEHLWESKQLGAHSPH 171
           + DS +++  R + +H W+ +Q GA S H
Sbjct: 192 FGDSCKFLHDRSDYKHGWQMEQEGAGSGH 220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,081
Number of Sequences: 2352
Number of extensions: 10571
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)