Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F21
         (481 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               26   0.24 
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   3.0  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   3.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   3.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   3.9  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   5.2  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   6.9  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = -3

Query: 275 FQCFIIC--EKDNCICSSTVTKLKCFVL---KNINVDSNTCGECAPSCLLSHKCSSSTRV 111
           + CFI C  EK + I +  +   K   +   KNI++D     EC  +   + KC +    
Sbjct: 75  YSCFITCALEKSHIIQNDEIQLDKLVEMANRKNISIDVKMLSECINANKSTDKCENGLNF 134

Query: 110 TI 105
            I
Sbjct: 135 II 136


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 137 HKCSSSTRVTIYCESLYKTENFLAT 63
           H+ S +  V  +C   Y+T+N L T
Sbjct: 29  HEQSDTLYVCEFCNRRYRTKNSLTT 53


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 152 SCLLSHKCSSSTRVTIYCESL 90
           S +  ++C++ T  T YC SL
Sbjct: 40  SNVYQYRCANCTYATKYCHSL 60


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 343 PPQSALEANSRKQKVYEQQGKRRESIKMSC 432
           P +  LEA  R +   EQQG    ++   C
Sbjct: 206 PIERILEAEKRVECKMEQQGNYENAVSHIC 235


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 343 PPQSALEANSRKQKVYEQQGKRRESIKMSC 432
           P +  LEA  R +   EQQG    ++   C
Sbjct: 206 PIERILEAEKRVECKMEQQGNYENAVSHIC 235


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 257 CEKDNCICSSTVTK 216
           CEK  CIC  T  K
Sbjct: 74  CEKVGCICRKTSFK 87


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 257 CEKDNCICSSTVTK 216
           CEK  CIC  T  K
Sbjct: 74  CEKGVCICRKTSFK 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,786
Number of Sequences: 438
Number of extensions: 3063
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)