Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F20
(188 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.11
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 0.19
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 0.19
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 0.33
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 0.33
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 27 0.43
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 0.57
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 0.57
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 26 0.75
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 0.75
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 0.75
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 0.75
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 25 1.7
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 25 1.7
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 25 1.7
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 24 3.0
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 23 4.0
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 23 4.0
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 23 4.0
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 23 5.3
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 23 5.3
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 23 5.3
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 23 7.0
SPCC584.13 |||amino acid permease, unknown 14|Schizosaccharomyce... 23 7.0
SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizos... 23 7.0
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 22 9.3
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 22 9.3
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 22 9.3
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 0.11
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 108 PPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCA 7
PP L P+A PP P G A P PP A
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSA 453
Score = 25.0 bits (52), Expect = 1.3
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 9/52 (17%)
Frame = -3
Query: 141 SLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTP---------CGNRAPPSTPP 13
S PSTG R PP L+ + PPP P GN + STPP
Sbjct: 368 SAPSTG---RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Score = 24.2 bits (50), Expect = 2.3
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -3
Query: 141 SLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCA 7
S+P + APP P + +PPP + + P PP A
Sbjct: 350 SIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPA 394
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.9 bits (59), Expect = 0.19
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 111 APPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
APP APT + H PPP P + PS PP
Sbjct: 730 APPTPAPTPAVK--HHPPP-PPVRSSISPSMPP 759
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 0.19
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 10/64 (15%)
Frame = -3
Query: 174 PGASGAH-HHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPP---------PRTPCGNRAPP 25
PGAS A +S S TL PP + TA + PP P T G R PP
Sbjct: 888 PGASSAQPAAMSRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPP 947
Query: 24 STPP 13
P
Sbjct: 948 VQQP 951
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 0.33
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = -3
Query: 150 HLSSLPSTGTLQRAPP-LLAPT-AGSRRAHRPPPRTPCGNRAPPSTPP 13
H S P APP + APT + PPP P PPS PP
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 27.1 bits (57), Expect = 0.33
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 114 RAPPLLAPTAGSRRAHRPPPR-TPCGNRAPPSTPP 13
R PLL P +GS + P P TP PP+ PP
Sbjct: 1016 RVKPLLPPRSGSSSSGVPAPNLTPV--NVPPTPPP 1048
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 26.6 bits (56), Expect = 0.43
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGSR 76
SG+ + S+ P+ GT ++ PTAG+R
Sbjct: 241 SGSELYTSTFPANGTTSGTVEVVIPTAGTR 270
Score = 26.6 bits (56), Expect = 0.43
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGSR 76
SG+ + S+ P+ GT ++ PTAG+R
Sbjct: 381 SGSELYTSTFPANGTTSGTVEVVIPTAGTR 410
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 0.57
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 8 AHGGVEGGARLPHGVRGGGLCARRLPAVGARSGGARCSVPVLGSDERWWWAPLAPGRD 181
A GG GGAR G RGG R + G R GGA+ V+ R +A G++
Sbjct: 35 ARGGGRGGARGGRGGRGGARGGRG-GSSGGR-GGAKGGAKVIIEPHRHAGVFIARGKE 90
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 0.57
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -3
Query: 177 LPGASGAHHHLSSLPSTG-TLQRAPPLLAPTAGSRRAHRPPP--RTPCGNRAPPSTPPCA 7
LP S + +S+P TG + P + PT+ S + PPP + G + P
Sbjct: 332 LPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTST 391
Query: 6 SC 1
SC
Sbjct: 392 SC 393
Score = 25.4 bits (53), Expect = 1.00
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -3
Query: 177 LPGASGAHHHLSSLPSTG-TLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCAS 4
LP S + +S+P TG + P + PT+ S + PPP + S P S
Sbjct: 278 LPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTS 336
Score = 24.2 bits (50), Expect = 2.3
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 180 SLPGASGAHHHLSSLPSTGTLQRAPPLLAPTAGSRRAHRP-PPRTPCGNRAPPSTP 16
S AS S LPST T + PT GS P P P + + S P
Sbjct: 94 STSSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIP 149
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 25.8 bits (54), Expect = 0.75
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGS 79
SG+ + S+ P+ GT ++APTAG+
Sbjct: 884 SGSVGYTSTFPAQGTTSGTVEIVAPTAGT 912
Score = 25.8 bits (54), Expect = 0.75
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGS 79
SG+ + S+ P+ GT ++APTAG+
Sbjct: 954 SGSVGYTSTFPAQGTTSGTVEIVAPTAGT 982
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGS 79
SG+ + S+ P++GT ++ PTAG+
Sbjct: 219 SGSVGYTSTFPASGTTSGTVEVVEPTAGT 247
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGS 79
SG+ + S+ P++GT ++ PTAG+
Sbjct: 359 SGSVGYTSTFPASGTTSGTVEVVEPTAGT 387
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGS 79
SG+ + S+ P++GT ++ PTAG+
Sbjct: 569 SGSVGYTSTFPASGTTSGTVEVVEPTAGT 597
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGS 79
SG+ + S+ P++GT ++ PTAG+
Sbjct: 604 SGSVGYTSTFPASGTTSGTVEVVEPTAGT 632
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGS 79
SG+ + S+ P++GT ++ PTAG+
Sbjct: 639 SGSVGYTSTFPASGTTSGTVEVVEPTAGT 667
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGS 79
SG+ + S+ P++GT ++ PTAG+
Sbjct: 744 SGSVGYTSTFPASGTTSGTVEVVEPTAGT 772
Score = 23.8 bits (49), Expect = 3.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 165 SGAHHHLSSLPSTGTLQRAPPLLAPTAGS 79
SG+ S+ P++GT ++ PTAG+
Sbjct: 499 SGSKTFTSTFPASGTTSGTVEVVEPTAGT 527
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 0.75
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
PS G PP AP + A PP P +APP P
Sbjct: 1203 PSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA-KAPPVPAP 1242
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.8 bits (54), Expect = 0.75
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +2
Query: 2 HDAHGGVEGGARLPHGVRGGGLCARRLPAVGARSGGARCSVPVLG 136
H +G G A L GVR G P +GAR G V LG
Sbjct: 2853 HILYGVTAGAASLYTGVRSGVRGLALQPIIGARRNGLPGLVKGLG 2897
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 0.75
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -3
Query: 108 PPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
P ++ PT PPP G PP PP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 23.8 bits (49), Expect = 3.0
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCA 7
P+ + PP AP G PPP PP PP A
Sbjct: 744 PAPAPIPVPPP--APIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 24.6 bits (51), Expect = 1.7
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = -3
Query: 177 LPGASGAHHHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
LP G + + P LQR P SR AH P P + PP
Sbjct: 334 LPDVYGGVNASTYNPPRAPLQRTPSGSLTPLSSRPAHTSLPPIPTVQTTSSNVPP 388
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 24.6 bits (51), Expect = 1.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 81 SLPWEREAEVLAAVYRYSAAMRDG 152
SL W E+ ++AA Y YS + G
Sbjct: 256 SLLWANESAIVAAGYNYSPILLQG 279
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 24.6 bits (51), Expect = 1.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 117 QRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTP 16
QR+P A T G+ H PR+P +RA P
Sbjct: 745 QRSPLASAKTNGNFTFHAELPRSPFSSRANNINP 778
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 23.8 bits (49), Expect = 3.0
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = -3
Query: 171 GASGAHHHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCAS 4
G S A S P+ T Q L PT+ R PPP P PP S
Sbjct: 116 GKSSASAAPPSAPAPPTPQSE--LRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPS 169
Score = 23.8 bits (49), Expect = 3.0
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPP---STPPCA 7
P T + PP AP S P P ++APP S PP A
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Score = 22.6 bits (46), Expect = 7.0
Identities = 13/49 (26%), Positives = 18/49 (36%)
Frame = -3
Query: 150 HLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCAS 4
H+ ++ AP P + R PPR +P S PP S
Sbjct: 114 HIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPS 162
Score = 22.2 bits (45), Expect = 9.3
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -3
Query: 114 RAPPL---LAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
+APP+ L P A + PP P A P PP
Sbjct: 163 KAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 23.4 bits (48), Expect = 4.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 159 AHHHLSSLPSTGTLQRAPPLLAP 91
+H H++ LP+T APP P
Sbjct: 322 SHPHMAFLPATVPTHSAPPGFVP 344
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 23.4 bits (48), Expect = 4.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 76 ASTQAAAADTVR*PRTALNATVR 8
AST AAA T + P+ A + VR
Sbjct: 568 ASTNAAATTTTKKPKAAKSTAVR 590
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 23.4 bits (48), Expect = 4.0
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -3
Query: 75 RAHRPPPRTPCGNRAPPS--TPP 13
R+ R PRTP G+ P S +PP
Sbjct: 141 RSGRQSPRTPIGSTTPKSSHSPP 163
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 23.0 bits (47), Expect = 5.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 63 PPPRTPCGNRAPPSTPP 13
PPP P PPS PP
Sbjct: 9 PPPPPPPPGFEPPSQPP 25
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 23.0 bits (47), Expect = 5.3
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -3
Query: 120 LQRAPPLLAPTAGSRRAHRPPPRTPCGNR-APPSTPPCAS 4
L PP+ T + R PPP + NR A P P S
Sbjct: 453 LPTLPPIQTTTIQTSREVAPPPSSINSNRAASPFRPTSVS 492
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 23.0 bits (47), Expect = 5.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 138 LPSTGTLQRAPPLLAPTAGSRRAHR 64
LPS T R + PT S AHR
Sbjct: 368 LPSGATTPRRRDSMEPTYASNEAHR 392
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 22.6 bits (46), Expect = 7.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1
Query: 185 SNLCRVQAEPTTISHRCRVPVHCSEH 108
SN+ +V EP + C + C EH
Sbjct: 326 SNISKVNTEPFRCENVCDELLPCGEH 351
>SPCC584.13 |||amino acid permease, unknown 14|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 544
Score = 22.6 bits (46), Expect = 7.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 168 ASGAHHHLSSLPSTGTLQRAPPLLAP 91
A+G SS+P++G L A +LAP
Sbjct: 91 ANGMAELCSSMPTSGGLYYAAAVLAP 116
>SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 22.6 bits (46), Expect = 7.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 126 RYSAAMRDGGGLRLHPAEI 182
R+ A M D G LRL+ AEI
Sbjct: 263 RFHAIMVDNGLLRLNEAEI 281
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 22.2 bits (45), Expect = 9.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 15 VALRAVRGYRTVSAAAACVLAGSLPWEREAEVLAAVYRYS 134
V +R R V A ++ SL +EAE + + +YS
Sbjct: 410 VVRNLIRDNRVVYGGGAAEISCSLAVTKEAEKIPGIDQYS 449
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 22.2 bits (45), Expect = 9.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 143 HRCRVPVHCSEHLRFSL 93
HR ++CSEHL ++L
Sbjct: 203 HRSNDNMYCSEHLIYAL 219
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 22.2 bits (45), Expect = 9.3
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 87 AGSRRAHRPPPRTPCGNRAPPSTP 16
A S +H P P PPSTP
Sbjct: 171 AMSPPSHSPSPFLQSSQHIPPSTP 194
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 824,495
Number of Sequences: 5004
Number of extensions: 14844
Number of successful extensions: 101
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 43
effective length of database: 2,147,306
effective search space used: 40798814
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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